• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105386
Ensembl Protein ID ENSRNOP00000071449.1
UniProt Accession A0A0G2K0H6; A0A0G2K0H6_RAT
Genbank Protein ID ENSRNOP00000071449
Protein Name WD repeat domain 13
Genbank Nucleotide ID AABR07037184
Gene Name Wdr13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000039587.4 ENSRNOT00000007464.7 ENSRNOP00000007464.6
ENSRNOG00000039587.4 ENSRNOT00000078168.1 ENSRNOP00000071449.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-19 70.1 123 161
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt +v+++a+  s+++lvs s D t+++W   +g++++
   Q: 123  GHTRGVSDFAWslSNDILVSTSLDATMRIWASEDGRCIR 161
           8***********987********************9987 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
LQDFEDDPRA LGARGHRRSV SRGSYQLQAQ MNRAVYEDRP PGSVVPTSVA EASRAMAGDT 60
SLSENYAFAG MYHVFDQHVD EAVPRVRFAN DDRHRLACCS LDGSISLCQL VPAPPTVLHV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105386|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CACAGGTACA ACGCCTACCG TACACCAACG TTTCCACAGT TTCGGACCCA GTATATCCGC 60
CGGCGCAGCC AGCTGCTGCG GGAGAATGCC AAGGCTGGGC ACCCCCCAGC ACTGCGTCGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105386|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:1990841--F:promoter-specific chromatin binding
GO:1904691--P:negative regulation of type B pancreatic cell proliferation
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001029 Aegilops tauschii 35.77 1.00e-28 120.00
IUUC-Aml-001761 Ailuropoda melanoleuca 98.22 0.00e+00 738.00
IUUC-Atr-002577 Amborella trichopoda 38.11 2.00e-58 220.00
IUUC-Aca-004423 Anolis carolinensis 87.53 0.00e+00 686.00
IUUC-Aly-005453 Arabidopsis lyrata 38.04 3.00e-56 212.00
IUUC-Ath-007256 Arabidopsis thaliana 38.04 7.00e-56 211.00
IUUC-Ame-010600 Astyanax mexicanus 80.66 5.00e-176 610.00
IUUC-Bta-013511 Bos taurus 98.22 0.00e+00 738.00
IUUC-Bdi-014322 Brachypodium distachyon 39.51 1.00e-54 207.00
IUUC-Bol-015992 Brassica oleracea 38.96 3.00e-58 219.00
IUUC-Bra-017399 Brassica rapa 38.32 2.00e-58 219.00
IUUC-Cja-019508 Callithrix jacchus 97.96 0.00e+00 738.00
IUUC-Cfa-020273 Canis familiaris 97.71 0.00e+00 733.00
IUUC-Cpo-022002 Cavia porcellus 97.46 0.00e+00 737.00
IUUC-Csa-023862 Chlorocebus sabaeus 98.22 0.00e+00 737.00
IUUC-Cin-025687 Ciona intestinalis 55.30 1.00e-128 452.00
IUUC-Csv-025992 Ciona savignyi 57.72 3.00e-128 451.00
IUUC-Dre-028697 Danio rerio 81.42 1.00e-178 619.00
IUUC-Dno-029208 Dasypus novemcinctus 98.22 0.00e+00 738.00
IUUC-Dor-030316 Dipodomys ordii 97.60 2.00e-108 385.00
IUUC-Eca-033362 Equus caballus 98.19 8.00e-178 616.00
IUUC-Eeu-034599 Erinaceus europaeus 85.48 1.00e-133 469.00
IUUC-Fca-035874 Felis catus 97.96 0.00e+00 736.00
IUUC-Gmo-039176 Gadus morhua 79.95 5.00e-176 610.00
IUUC-Gga-040458 Gallus gallus 77.10 8.00e-61 225.00
IUUC-Gac-041802 Gasterosteus aculeatus 80.66 0.00e+00 640.00
IUUC-Gma-043284 Glycine max 37.39 5.00e-54 205.00
IUUC-Ggo-045546 Gorilla gorilla 97.96 0.00e+00 736.00
IUUC-Hsa-046407 Homo sapiens 97.96 0.00e+00 736.00
IUUC-Hvu-047726 Hordeum vulgare 36.52 8.00e-51 194.00
IUUC-Itr-048939 Ictidomys tridecemlineatus 98.22 0.00e+00 738.00
IUUC-Lpe-051374 Leersia perrieri 40.12 3.00e-56 212.00
IUUC-Loc-052403 Lepisosteus oculatus 73.54 2.00e-159 555.00
IUUC-Laf-053721 Loxodonta africana 98.22 0.00e+00 738.00
IUUC-Mcc-055449 Macaca mulatta 98.22 0.00e+00 737.00
IUUC-Meu-056487 Macropus eugenii 90.59 0.00e+00 694.00
IUUC-Mtr-058659 Medicago truncatula 33.43 6.00e-49 188.00
IUUC-Mmr-061406 Microcebus murinus 98.73 0.00e+00 737.00
IUUC-Mdo-062331 Monodelphis domestica 91.05 0.00e+00 661.00
IUUC-Mmu-064001 Mus musculus 98.98 0.00e+00 743.00
IUUC-Mac-064934 Musa acuminata 37.31 2.00e-54 206.00
IUUC-Mpu-065871 Mustela putorius furo 97.96 0.00e+00 738.00
IUUC-Mlu-067463 Myotis lucifugus 96.95 0.00e+00 724.00
IUUC-Nle-070136 Nomascus leucogenys 98.22 0.00e+00 737.00
IUUC-Opr-070913 Ochotona princeps 97.18 0.00e+00 642.00
IUUC-Ont-071347 Oreochromis niloticus 80.15 0.00e+00 641.00
IUUC-Oan-073527 Ornithorhynchus anatinus 82.65 2.00e-177 614.00
IUUC-Ocu-074829 Oryctolagus cuniculus 92.17 0.00e+00 681.00
IUUC-Oba-075666 Oryza barthii 39.82 6.00e-56 211.00
IUUC-Obr-076413 Oryza brachyantha 40.12 3.00e-55 209.00
IUUC-Ogl-076998 Oryza glaberrima 39.82 5.00e-56 211.00
IUUC-Ogu-078287 Oryza glumaepatula 40.12 1.00e-56 214.00
IUUC-Oin-079359 Oryza indica 39.82 7.00e-56 211.00
IUUC-Olo-080438 Oryza longistaminata 38.10 6.00e-31 127.00
IUUC-Ome-081328 Oryza meridionalis 40.12 3.00e-60 225.00
IUUC-Oni-082574 Oryza nivara 39.82 6.00e-56 211.00
IUUC-Opu-083376 Oryza punctata 37.07 2.00e-49 190.00
IUUC-Oru-085162 Oryza rufipogon 39.82 8.00e-56 211.00
IUUC-Osa-085507 Oryza sativa 39.82 8.00e-56 211.00
IUUC-Ola-087387 Oryzias latipes 78.88 5.00e-174 603.00
IUUC-Oga-088694 Otolemur garnettii 97.96 0.00e+00 736.00
IUUC-Oar-090355 Ovis aries 96.69 0.00e+00 718.00
IUUC-Ptr-091488 Pan troglodytes 96.36 6.00e-155 540.00
IUUC-Pan-092516 Papio anubis 98.22 0.00e+00 738.00
IUUC-Pma-094572 Petromyzon marinus 75.76 8.00e-179 619.00
IUUC-Ppa-096003 Physcomitrella patens 38.86 2.00e-45 176.00
IUUC-Pfo-096819 Poecilia formosa 76.44 4.00e-171 594.00
IUUC-Pab-098373 Pongo abelii 93.89 0.00e+00 723.00
IUUC-Pop-099930 Populus trichocarpa 39.58 4.00e-57 215.00
IUUC-Pca-100248 Procavia capensis 97.71 0.00e+00 731.00
IUUC-Ppe-101592 Prunus persica 37.50 7.00e-52 198.00
IUUC-Pva-102971 Pteropus vampyrus 97.71 0.00e+00 736.00
IUUC-Sha-107418 Sarcophilus harrisii 90.33 0.00e+00 688.00
IUUC-Smo-109105 Selaginella moellendorffii 42.09 6.00e-63 234.00
IUUC-Sit-109987 Setaria italica 39.21 9.00e-55 207.00
IUUC-Sly-111433 Solanum lycopersicum 36.84 3.00e-55 208.00
IUUC-Stu-112677 Solanum tuberosum 36.29 1.00e-57 217.00
IUUC-Sar-113317 Sorex araneus 98.31 3.00e-103 368.00
IUUC-Sbi-114115 Sorghum bicolor 38.69 1.00e-23 103.00
IUUC-Ssc-115697 Sus scrofa 97.55 3.00e-93 334.00
IUUC-Tru-118749 Takifugu rubripes 79.49 0.00e+00 632.00
IUUC-Tni-119685 Tetraodon nigroviridis 79.49 0.00e+00 630.00
IUUC-Tca-121769 Theobroma cacao 37.69 2.00e-55 209.00
IUUC-Tae-125563 Triticum aestivum 36.33 1.00e-35 143.00
IUUC-Tur-126403 Triticum urartu 34.96 2.00e-27 116.00
IUUC-Tbe-127245 Tupaia belangeri 97.94 9.00e-125 440.00
IUUC-Ttr-128854 Tursiops truncatus 97.71 0.00e+00 762.00
IUUC-Vvi-131113 Vitis vinifera 37.20 3.00e-54 206.00
IUUC-Xtr-132420 Xenopus tropicalis 80.20 9.00e-169 586.00
IUUC-Xma-134302 Xiphophorus maculatus 80.15 0.00e+00 639.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved