iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007572

Ensembl Protein ID

AT3G15470.1

UniProt Accession

Q9LDG7; Q9LDG7_ARATH

Genbank Protein ID

AAF35413.1; AAK50098.1; AAL87370.1; AEE75680.1; BAB02376.1

Protein Name

AT3g15470/MJK13_13; MJK13.13 protein; Transducin/WD40 repeat-like superfamily protein; WD-40 repeat protein-like

Genbank Nucleotide ID

AC024081; AF372960; AY081717; CP002686; AB022218

Gene Name

MJK13.13; At3g15470

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G15470	AT3G15470.1	AT3G15470.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-28	97.1	511	548
UBD/Beta-Prp	2.40e-41	142.8	406	720

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d+v +la+  s  +l+s+s D+t+++W+l+++++lk
   Q: 511  GHVDDVLDLAWskS-QHLLSSSMDKTVRLWNLSSQTCLK 548
           8**********643.9********************987 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdls..........................................................tg 84
            ++++ h++ ++++kfs dgk+l++++eD +i++w +                                                           + 
   Q: 406  TQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVeaekkgellldrpellllatngspepttmsprrrgrtsisrkslslenifvpdslfglSE 503
           567899*****************************6555779999999999*********************************************** PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtd 181
           k++ +++gh d+vl+l++s+ +++l+s s d+t+r+w+l++++cl+     h++ v+c++++p + ++++sGslD +vr+W+++  ++++      ++
   Q: 504  KPFCSFQGHVDDVLDLAWSK-SQHLLSSSMDKTVRLWNLSSQTCLK--VFSHSDYVTCIQFNPVDdRYFISGSLDAKVRVWSIPDRQVVDWYD--LHE 596
           ********************.99**********************9..556888*****************************9888887763..799 PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgec.........vrtlnghtdnvksvrfs.pnderlvsgssDgsiriWdlrsgdllktlqlhnssvis 269
           +v+s  ++++g+ ++ gs++g+ ++++ + ++           ++ ++h++ ++  +f    +  ++++ssD  ir+   +  dl+++l++ +++++ 
   Q: 597  MVTSACYTPDGQGVLVGSYKGSCRMYSASDNKLqqksqinlqNKKKKAHQKKITGFQFVpGSSSEVLVTSSDSRIRVV--DGTDLVNKLKGFRNTSSQ 692
           *****************************666656666677677888999*********555678888999******6..5999999***99988888 PP
   S: 270  vav.lsfgdnvlvlgsedskvniwklkk 296
           +++ +  +++++v++seds v iwk+++
   Q: 693  ISAsITADGKYVVSASEDSHVYIWKYES 720
           88845566*****************975 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSYQNEEEEE GGDTNDCFYE SLDRLASSSS CSCSASNSDY DSESSPRISS AASHDSEELY 60
GGGRRRRYPF PVPRFPMGAS KFDVWTSEPA SVSERRSKLL NEMGLSRDPV LSRLKPVSDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGTGCAAA GGTCCACAAA CCAAAAATTA AAACAGAGAG CTGAACCCAA AAGAAAAAAA 60
AACCGAAACA AAAAAAAGTT CTCTCTCTCT CTCTCTCTCC ATTGATTTCT TCTACACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ath:AT3G15470

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005544	Arabidopsis lyrata	95.38	0.00e+00	1320.00
IUUC-Ago-007814	Ashbya gossypii	31.73	2.00e-42	167.00
IUUC-Acl-008290	Aspergillus clavatus	28.45	2.00e-42	166.00
IUUC-Afl-008536	Aspergillus flavus	31.16	5.00e-57	215.00
IUUC-Afu-008761	Aspergillus fumigatus	34.81	1.00e-55	211.00
IUUC-Ani-009270	Aspergillus nidulans	36.29	5.00e-55	209.00
IUUC-Ang-009627	Aspergillus niger	37.62	3.00e-55	209.00
IUUC-Aor-010153	Aspergillus oryzae	34.62	2.00e-56	213.00
IUUC-Ate-010263	Aspergillus terreus	38.46	1.00e-54	207.00
IUUC-Ame-011096	Astyanax mexicanus	39.30	7.00e-58	218.00
IUUC-Bgr-012014	Blumeria graminis	36.73	4.00e-54	205.00
IUUC-Bci-013651	Botrytis cinerea	31.58	7.00e-61	228.00
IUUC-Bol-016551	Brassica oleracea	80.10	0.00e+00	1073.00
IUUC-Bra-017437	Brassica rapa	79.90	0.00e+00	1007.00
IUUC-Cel-018681	Caenorhabditis elegans	38.53	1.00e-58	221.00
IUUC-Cpo-021357	Cavia porcellus	33.26	9.00e-60	224.00
IUUC-Cin-025347	Ciona intestinalis	33.56	6.00e-59	221.00
IUUC-Csv-025844	Ciona savignyi	32.29	2.00e-54	205.00
IUUC-Cgl-026610	Colletotrichum gloeosporioides	33.49	5.00e-54	205.00
IUUC-Dre-028529	Danio rerio	32.55	1.00e-59	224.00
IUUC-Dor-030184	Dipodomys ordii	46.94	9.00e-45	174.00
IUUC-Dse-031178	Dothistroma septosporum	33.26	3.00e-55	209.00
IUUC-Dme-032135	Drosophila melanogaster	31.96	1.00e-59	224.00
IUUC-Eeu-035325	Erinaceus europaeus	32.47	2.00e-43	170.00
IUUC-Fal-037153	Ficedula albicollis	32.71	2.00e-60	226.00
IUUC-Fso-038143	Fusarium solani	35.16	3.00e-54	206.00
IUUC-Gmo-039226	Gadus morhua	38.18	3.00e-58	219.00
IUUC-Ggr-039923	Gaeumannomyces graminis	36.54	1.00e-53	204.00
IUUC-Gma-043178	Glycine max	67.93	0.00e+00	792.00
IUUC-Kpa-049365	Komagataella pastoris	28.06	3.00e-37	149.00
IUUC-Lch-049794	Latimeria chalumnae	32.90	9.00e-60	224.00
IUUC-Lma-053232	Leptosphaeria maculans	34.59	1.00e-56	214.00
IUUC-Meu-056678	Macropus eugenii	36.82	2.00e-35	144.00
IUUC-Mor-057274	Magnaporthe oryzae	33.95	2.00e-54	207.00
IUUC-Mpo-057592	Magnaporthe poae	35.58	2.00e-52	201.00
IUUC-Mvi-060254	Microbotryum violaceum	38.85	9.00e-57	214.00
IUUC-Nfi-068449	Neosartorya fischeri	28.45	4.00e-36	145.00
IUUC-Ncr-068874	Neurospora crassa	34.50	4.00e-54	206.00
IUUC-Opr-071139	Ochotona princeps	46.94	1.00e-44	174.00
IUUC-Oba-075809	Oryza barthii	45.43	1.00e-169	589.00
IUUC-Ogu-077983	Oryza glumaepatula	45.47	7.00e-171	593.00
IUUC-Oin-079380	Oryza indica	45.58	1.00e-170	593.00
IUUC-Olo-080307	Oryza longistaminata	47.38	2.00e-143	502.00
IUUC-Ome-081629	Oryza meridionalis	45.50	3.00e-169	588.00
IUUC-Oni-082328	Oryza nivara	45.58	1.00e-170	593.00
IUUC-Olu-087651	Ostreococcus lucimarinus	42.48	3.00e-48	184.00
IUUC-Psi-094089	Pelodiscus sinensis	33.48	5.00e-61	228.00
IUUC-Pno-094806	Phaeosphaeria nodorum	32.88	3.00e-53	202.00
IUUC-Ppe-101184	Prunus persica	71.56	0.00e+00	793.00
IUUC-Pva-102846	Pteropus vampyrus	46.94	1.00e-44	174.00
IUUC-Pte-104369	Pyrenophora teres	33.19	9.00e-58	218.00
IUUC-Sce-106277	Saccharomyces cerevisiae	30.95	4.00e-46	179.00
IUUC-Smo-108748	Selaginella moellendorffii	36.96	7.00e-118	417.00
IUUC-Sly-111804	Solanum lycopersicum	62.59	0.00e+00	841.00
IUUC-Stu-111949	Solanum tuberosum	71.88	0.00e+00	819.00
IUUC-Sar-112958	Sorex araneus	57.38	1.00e-18	88.20
IUUC-Sbi-114454	Sorghum bicolor	50.82	6.00e-178	617.00
IUUC-Tru-117808	Takifugu rubripes	40.38	7.00e-58	218.00
IUUC-Tni-120013	Tetraodon nigroviridis	39.18	4.00e-53	202.00
IUUC-Tre-122175	Trichoderma reesei	35.82	6.00e-53	201.00
IUUC-Tvi-122654	Trichoderma virens	32.95	1.00e-53	204.00
IUUC-Tae-125210	Triticum aestivum	51.84	3.00e-168	584.00
IUUC-Tme-126882	Tuber melanosporum	35.23	6.00e-61	228.00
IUUC-Tbe-127531	Tupaia belangeri	46.94	1.00e-43	171.00
IUUC-Vda-129935	Verticillium dahliae	32.11	4.00e-57	216.00
IUUC-Vpa-130109	Vicugna pacos	46.94	2.00e-44	174.00
IUUC-Vvi-130908	Vitis vinifera	68.24	0.00e+00	804.00
IUUC-Yli-134376	Yarrowia lipolytica	33.79	7.00e-50	191.00
IUUC-Zma-135701	Zea mays	54.29	9.00e-164	570.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence