iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095642

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545402

Gene Name

PHYPADRAFT_228283

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S533_11V6	PP1S533_11V6.1	PP1S533_11V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.10e-56	190.3	5	139
UBD/UBC-like/UBD_UBC	1.20e-74	249.7	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspa 95
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+Wspa
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPQDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQWSPA 96
           899*********************.9************************************************************9..****** PP
   S: 96   lsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           l++++vllsi+sll++pnp++pl  e+a+++k+++++y+ ++r
   Q: 97   LTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKTKYEGTAR 139
           ***************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaaltl 95
           ri kelkdl++d+++ +sa++v +d+f+++ati+gp+dspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+alt+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPQDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTI 99
           899******************************************************************************************** PP
   S: 96   skvllslcslladaepddplvaeiariyktdkekykriarewt 138
           skvlls+csll+d++pddplv+eia++yktdk ky+ +ar+wt
   Q: 100  SKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKTKYEGTARNWT 142
           ******************************************8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP QDSPYSGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGAAACCT ATTGCTCGTC TGGGGGAATC AGAGGTGTGA GAGGAGAGGA GAGGAACTTG 60
TGAATTGCGC GGTCTCGTTG CATGCGTGCG AGTAAGATAG TGTTCCTAGA TGGCGTCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

ppp:PHYPADRAFT_228283

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004043	Anas platyrhynchos	78.32	9.00e-68	248.00
IUUC-Ame-011566	Astyanax mexicanus	80.27	9.00e-71	258.00
IUUC-Eeu-034766	Erinaceus europaeus	78.72	2.00e-65	240.00
IUUC-Gmo-038775	Gadus morhua	79.59	2.00e-70	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence