iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001701

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01140307

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000009880.1	ENSAMET00000010914.1	ENSAMEP00000010459.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.80e-14	52.4	318	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 318  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 363
           79*********....9******************.*******7.******86 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

EEEDGGLGAF DDYFPEEPVG LPKKKKSKKL KENRSKGKRK KKEGSNDELS ENEEDLEEKS 60
ESEGSDYSPN KKKKKKLKDK KEKKAKRKRK DDDEDDNDDG CLKEPKSSGQ LMAEWGLDDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGAAGAAG ATGGTGGCCT TGGTGCCTTT GATGACTATT TCCCTGAGGA GCCCGTGGGC 60
CTTCCCAAGA AGAAGAAATC CAAGAAGCTC AAGGAGAACC GGTCCAAAGG GAAGCGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003406	Anas platyrhynchos	79.91	0.00e+00	2491.00
IUUC-Aca-004671	Anolis carolinensis	82.55	0.00e+00	2641.00
IUUC-Aly-005645	Arabidopsis lyrata	39.36	8.00e-151	529.00
IUUC-Ath-007406	Arabidopsis thaliana	39.89	1.00e-155	545.00
IUUC-Ame-011883	Astyanax mexicanus	75.62	0.00e+00	2498.00
IUUC-Bta-012951	Bos taurus	89.45	0.00e+00	2599.00
IUUC-Bol-016073	Brassica oleracea	40.66	8.00e-156	545.00
IUUC-Bra-016724	Brassica rapa	40.88	8.00e-157	549.00
IUUC-Cja-018871	Callithrix jacchus	89.39	0.00e+00	2819.00
IUUC-Cfa-021063	Canis familiaris	98.40	0.00e+00	2980.00
IUUC-Cpo-022083	Cavia porcellus	92.93	0.00e+00	2858.00
IUUC-Csa-023084	Chlorocebus sabaeus	96.39	0.00e+00	3118.00
IUUC-Dre-028226	Danio rerio	77.80	0.00e+00	2380.00
IUUC-Dno-029923	Dasypus novemcinctus	94.99	0.00e+00	1917.00
IUUC-Dor-030167	Dipodomys ordii	70.58	0.00e+00	1910.00
IUUC-Ete-032757	Echinops telfairi	65.44	0.00e+00	2093.00
IUUC-Eca-034372	Equus caballus	96.93	0.00e+00	2965.00
IUUC-Eeu-034777	Erinaceus europaeus	65.74	0.00e+00	1728.00
IUUC-Fca-036048	Felis catus	97.50	0.00e+00	3014.00
IUUC-Fal-037282	Ficedula albicollis	87.57	0.00e+00	2760.00
IUUC-Gmo-038957	Gadus morhua	73.52	0.00e+00	1353.00
IUUC-Gga-040607	Gallus gallus	87.74	0.00e+00	2344.00
IUUC-Ggo-044514	Gorilla gorilla	96.00	0.00e+00	3126.00
IUUC-Hsa-046181	Homo sapiens	96.04	0.00e+00	3088.00
IUUC-Lch-050343	Latimeria chalumnae	72.99	0.00e+00	1906.00
IUUC-Loc-052795	Lepisosteus oculatus	79.86	0.00e+00	2653.00
IUUC-Laf-053749	Loxodonta africana	95.78	0.00e+00	3043.00
IUUC-Mcc-055856	Macaca mulatta	96.11	0.00e+00	3115.00
IUUC-Meu-056050	Macropus eugenii	75.93	0.00e+00	1167.00
IUUC-Mga-059630	Meleagris gallopavo	88.14	0.00e+00	2784.00
IUUC-Mmr-060986	Microcebus murinus	94.21	0.00e+00	2895.00
IUUC-Mdo-062971	Monodelphis domestica	74.39	0.00e+00	1825.00
IUUC-Mmu-063644	Mus musculus	94.68	0.00e+00	3014.00
IUUC-Mpu-066528	Mustela putorius furo	93.96	0.00e+00	2995.00
IUUC-Nle-069824	Nomascus leucogenys	93.33	0.00e+00	2833.00
IUUC-Opr-070960	Ochotona princeps	67.67	0.00e+00	2234.00
IUUC-Ont-072647	Oreochromis niloticus	75.66	0.00e+00	2457.00
IUUC-Oan-072885	Ornithorhynchus anatinus	79.75	0.00e+00	1744.00
IUUC-Ola-086961	Oryzias latipes	73.88	0.00e+00	2390.00
IUUC-Oga-088775	Otolemur garnettii	93.86	0.00e+00	2973.00
IUUC-Oar-090301	Ovis aries	95.81	0.00e+00	2878.00
IUUC-Ptr-090586	Pan troglodytes	94.08	0.00e+00	3059.00
IUUC-Pan-092282	Papio anubis	96.42	0.00e+00	3077.00
IUUC-Psi-093007	Pelodiscus sinensis	86.04	0.00e+00	2300.00
IUUC-Pfo-096802	Poecilia formosa	75.81	0.00e+00	2215.00
IUUC-Pab-097677	Pongo abelii	96.98	0.00e+00	2478.00
IUUC-Pca-100559	Procavia capensis	92.11	0.00e+00	2862.00
IUUC-Rno-105378	Rattus norvegicus	93.97	0.00e+00	2959.00
IUUC-Sha-107350	Sarcophilus harrisii	85.19	0.00e+00	2749.00
IUUC-Smo-108946	Selaginella moellendorffii	36.81	2.00e-159	557.00
IUUC-Ssc-116303	Sus scrofa	96.47	0.00e+00	2682.00
IUUC-Tgu-116779	Taeniopygia guttata	82.54	0.00e+00	2536.00
IUUC-Tru-117597	Takifugu rubripes	74.96	0.00e+00	2472.00
IUUC-Ttr-128301	Tursiops truncatus	94.57	0.00e+00	3012.00
IUUC-Xtr-132668	Xenopus tropicalis	79.55	0.00e+00	2440.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence