iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133816

Ensembl Protein ID

ENSXMAP00000016105.1

UniProt Accession

M4ANR0; M4ANR0_XIPMA

Genbank Protein ID

ENSXMAP00000016105

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01037303

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000016035.1	ENSXMAT00000016129.1	ENSXMAP00000016105.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.30e-17	62.5	328	373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl+++  ++ p+ + w Cp C++
   Q: 328  DYCEVCQQGGE----IILCDTCPRAYHLVCLEPE-LDKAPEGK-WSCPHCEK 373
           79*********....9******************.*******7.******86 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

EISDREVPCK KKGRPKKKKD TKKKEKEGKP AKTKKRKKID SDVERVSDRE RDYGENSDSI 60
ASDYGSGEKK KKKKHKERKE KKTKKKKKDD GDRDSSQEET TKQPIEQKTS AQLAKEWGLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGATATCAG ACCGAGAGGT CCCGTGCAAG AAGAAAGGCC GGCCCAAGAA GAAGAAGGAC 60
ACAAAGAAGA AAGAGAAAGA GGGGAAACCT GCCAAAACAA AGAAACGCAA GAAGATTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028722--CHD3
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0007417--P:central nervous system development
GO:0051297--P:centrosome organization
GO:0006325--P:chromatin organization
GO:0048589--P:developmental growth
GO:0006355--P:regulation of transcription, DNA-templated
GO:0007051--P:spindle organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005645	Arabidopsis lyrata	42.60	8.00e-152	532.00
IUUC-Ath-007406	Arabidopsis thaliana	40.86	2.00e-157	551.00
IUUC-Ame-011352	Astyanax mexicanus	85.85	0.00e+00	2202.00
IUUC-Bta-012868	Bos taurus	75.55	0.00e+00	2297.00
IUUC-Bol-016073	Brassica oleracea	41.59	1.00e-159	558.00
IUUC-Bra-016724	Brassica rapa	41.71	4.00e-160	560.00
IUUC-Cfa-021055	Canis familiaris	75.73	0.00e+00	2287.00
IUUC-Cpo-021523	Cavia porcellus	75.16	0.00e+00	2303.00
IUUC-Csa-024136	Chlorocebus sabaeus	75.37	0.00e+00	2279.00
IUUC-Dre-028043	Danio rerio	85.36	0.00e+00	2155.00
IUUC-Eeu-034777	Erinaceus europaeus	69.12	0.00e+00	1813.00
IUUC-Fca-036043	Felis catus	75.67	0.00e+00	2279.00
IUUC-Gmo-038957	Gadus morhua	83.62	0.00e+00	1542.00
IUUC-Gac-041375	Gasterosteus aculeatus	78.96	0.00e+00	2873.00
IUUC-Ggo-045538	Gorilla gorilla	75.69	0.00e+00	2284.00
IUUC-Hsa-045916	Homo sapiens	75.55	0.00e+00	2274.00
IUUC-Lch-050343	Latimeria chalumnae	76.56	0.00e+00	1978.00
IUUC-Loc-052383	Lepisosteus oculatus	82.19	0.00e+00	2117.00
IUUC-Laf-053870	Loxodonta africana	77.22	0.00e+00	2250.00
IUUC-Mmr-061223	Microcebus murinus	74.70	0.00e+00	2273.00
IUUC-Mdo-062971	Monodelphis domestica	76.27	0.00e+00	2273.00
IUUC-Mmu-063920	Mus musculus	75.45	0.00e+00	2278.00
IUUC-Mpu-065809	Mustela putorius furo	75.54	0.00e+00	2276.00
IUUC-Mlu-067355	Myotis lucifugus	75.40	0.00e+00	2300.00
IUUC-Opr-070960	Ochotona princeps	74.70	0.00e+00	2256.00
IUUC-Ont-072235	Oreochromis niloticus	85.49	0.00e+00	2941.00
IUUC-Ola-086491	Oryzias latipes	75.31	0.00e+00	2564.00
IUUC-Oga-088374	Otolemur garnettii	75.78	0.00e+00	2294.00
IUUC-Ptr-090799	Pan troglodytes	75.55	0.00e+00	2284.00
IUUC-Pfo-096265	Poecilia formosa	91.51	0.00e+00	3041.00
IUUC-Pab-098174	Pongo abelii	72.75	0.00e+00	2137.00
IUUC-Rno-104884	Rattus norvegicus	75.45	0.00e+00	2291.00
IUUC-Sha-107233	Sarcophilus harrisii	75.20	0.00e+00	2248.00
IUUC-Smo-108946	Selaginella moellendorffii	39.44	8.00e-158	552.00
IUUC-Ssc-115751	Sus scrofa	75.48	0.00e+00	2294.00
IUUC-Tru-118648	Takifugu rubripes	88.81	0.00e+00	2400.00
IUUC-Tni-120039	Tetraodon nigroviridis	86.76	0.00e+00	2362.00
IUUC-Tbe-128117	Tupaia belangeri	78.16	0.00e+00	997.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence