iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067091

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02034765

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000003835.2	ENSMLUT00000003839.2	ENSMLUP00000003496.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.30e-81	273.7	112	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           Gl+NlgNtC+ N++LQcL+ +p+l++++l+ ++++++++     +  ++++++q  +++ +++   +++p  +++ ++++a++f+  +q
   Q: 112  GLQNLGNTCFANAALQCLTYTPPLANYMLShEHSKTCHA-----EGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQ 195
           9*****************************445555544.....578****************************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +Da+Efl++ +d++++++                  l+ +++ + +++ ++l+ ++F+g l+s++kcl+c+ vs +++p ld++l+++ 
   Q: 196  EDAHEFLQYTVDAMQKAC------------------LNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
           ******************..................3344567789999**************************************** PP
   S: 179  keetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
            +     s++++Le+f+k+e+l+gen y+c+kckk + a+k++++++ ++vL+l LkRf    ++    ki k v++p+ Ld++p++++
   Q: 267  AQ-----SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF----ANFTGGKIAKDVKYPEYLDIRPYMSQ 346
           **.....9***************************************************....668889******************** PP
   S: 268  peekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           p+ +   + +Y L+av+vH+G +++ GHY++y+k ++g W++++Ds V++++  +vl+   ++aYvlfY r
   Q: 347  PNGE---PIIYVLYAVLVHTGfNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLS---QQAYVLFYIR 411
           9977...8**************************************************...********76 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MTIVDKASES SGPSTYQNQP GSSEAVSPGD MDAGSAGWGA VSSLNEVSNH TLSLGPVPGA 60
VVYSSSSVPD KSKPSPQKDQ ALGDGIAPPQ KVLFPSEKIC LKWQQTHRVG AGLQNLGNTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCATAG TTGACAAAGC TTCTGAATCT TCGGGCCCTT CGACCTATCA GAACCAGCCT 60
GGTAGCTCCG AGGCCGTCTC ACCTGGAGAC ATGGATGCAG GGTCTGCTGG CTGGGGTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	38.91	1.00e-70	261.00
IUUC-Aml-002303	Ailuropoda melanoleuca	76.27	0.00e+00	1505.00
IUUC-Atr-003102	Amborella trichopoda	46.91	2.00e-85	310.00
IUUC-Apl-003459	Anas platyrhynchos	44.26	0.00e+00	763.00
IUUC-Aca-004440	Anolis carolinensis	54.23	0.00e+00	979.00
IUUC-Aly-006389	Arabidopsis lyrata	42.36	3.00e-76	280.00
IUUC-Ath-006710	Arabidopsis thaliana	42.36	3.00e-76	280.00
IUUC-Ago-007836	Ashbya gossypii	27.07	1.00e-33	138.00
IUUC-Ame-011358	Astyanax mexicanus	67.09	0.00e+00	663.00
IUUC-Bta-012803	Bos taurus	73.99	0.00e+00	1688.00
IUUC-Bol-015996	Brassica oleracea	43.31	9.00e-82	298.00
IUUC-Bra-016634	Brassica rapa	43.31	3.00e-82	300.00
IUUC-Cja-019199	Callithrix jacchus	70.80	0.00e+00	1543.00
IUUC-Cfa-020597	Canis familiaris	78.62	0.00e+00	1712.00
IUUC-Cpo-021945	Cavia porcellus	68.20	0.00e+00	1594.00
IUUC-Csa-023485	Chlorocebus sabaeus	76.60	0.00e+00	1308.00
IUUC-Cho-024575	Choloepus hoffmanni	75.88	0.00e+00	1021.00
IUUC-Dre-028442	Danio rerio	63.98	0.00e+00	649.00
IUUC-Dno-029673	Dasypus novemcinctus	75.85	0.00e+00	1818.00
IUUC-Dor-030518	Dipodomys ordii	61.72	4.00e-126	446.00
IUUC-Ete-033088	Echinops telfairi	59.14	0.00e+00	981.00
IUUC-Eca-033579	Equus caballus	78.03	0.00e+00	1738.00
IUUC-Eeu-034511	Erinaceus europaeus	56.75	0.00e+00	723.00
IUUC-Fca-035792	Felis catus	74.52	0.00e+00	1562.00
IUUC-Fal-037075	Ficedula albicollis	42.91	0.00e+00	813.00
IUUC-Gga-040504	Gallus gallus	43.00	0.00e+00	765.00
IUUC-Gma-044075	Glycine max	47.88	8.00e-85	308.00
IUUC-Ggo-044798	Gorilla gorilla	68.02	0.00e+00	1303.00
IUUC-Hsa-046072	Homo sapiens	78.14	0.00e+00	1319.00
IUUC-Hvu-047620	Hordeum vulgare	41.25	1.00e-73	271.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	76.58	0.00e+00	1817.00
IUUC-Lch-049867	Latimeria chalumnae	69.20	0.00e+00	944.00
IUUC-Loc-052621	Lepisosteus oculatus	63.09	0.00e+00	693.00
IUUC-Laf-054330	Loxodonta africana	90.59	0.00e+00	1251.00
IUUC-Mcc-054900	Macaca mulatta	93.91	0.00e+00	756.00
IUUC-Meu-056877	Macropus eugenii	52.72	0.00e+00	647.00
IUUC-Mga-059501	Meleagris gallopavo	40.02	0.00e+00	702.00
IUUC-Mvi-060547	Microbotryum violaceum	45.62	2.00e-80	293.00
IUUC-Mmr-060864	Microcebus murinus	74.70	0.00e+00	1756.00
IUUC-Mdo-062395	Monodelphis domestica	63.49	0.00e+00	1483.00
IUUC-Mmu-064236	Mus musculus	67.26	0.00e+00	1501.00
IUUC-Mac-065039	Musa acuminata	44.78	9.00e-87	315.00
IUUC-Mpu-065822	Mustela putorius furo	78.12	0.00e+00	1758.00
IUUC-Nle-069004	Nomascus leucogenys	73.01	0.00e+00	1573.00
IUUC-Opr-071170	Ochotona princeps	59.43	0.00e+00	1063.00
IUUC-Ont-071832	Oreochromis niloticus	60.07	0.00e+00	637.00
IUUC-Oan-073711	Ornithorhynchus anatinus	56.86	0.00e+00	1264.00
IUUC-Ocu-074596	Oryctolagus cuniculus	93.46	0.00e+00	1021.00
IUUC-Oga-088641	Otolemur garnettii	74.13	0.00e+00	1720.00
IUUC-Oar-089760	Ovis aries	70.43	0.00e+00	1544.00
IUUC-Ptr-091445	Pan troglodytes	77.01	0.00e+00	1313.00
IUUC-Pan-092484	Papio anubis	76.80	0.00e+00	1299.00
IUUC-Psi-093277	Pelodiscus sinensis	56.19	0.00e+00	1124.00
IUUC-Pma-094651	Petromyzon marinus	38.24	5.00e-57	214.00
IUUC-Pfo-096469	Poecilia formosa	62.52	0.00e+00	647.00
IUUC-Pab-097794	Pongo abelii	76.15	0.00e+00	1188.00
IUUC-Ppe-101678	Prunus persica	46.25	4.00e-82	299.00
IUUC-Pva-103238	Pteropus vampyrus	73.36	0.00e+00	1551.00
IUUC-Rno-105068	Rattus norvegicus	67.78	0.00e+00	1524.00
IUUC-Sha-106713	Sarcophilus harrisii	64.54	0.00e+00	1515.00
IUUC-Sar-113340	Sorex araneus	82.40	0.00e+00	1075.00
IUUC-Tgu-117149	Taeniopygia guttata	43.90	0.00e+00	811.00
IUUC-Tru-117776	Takifugu rubripes	64.34	6.00e-174	604.00
IUUC-Tsy-118974	Tarsius syrichta	71.88	0.00e+00	1654.00
IUUC-Tni-120774	Tetraodon nigroviridis	66.67	2.00e-170	592.00
IUUC-Tca-120936	Theobroma cacao	45.93	2.00e-84	307.00
IUUC-Tbe-128006	Tupaia belangeri	67.44	4.00e-127	449.00
IUUC-Ttr-128764	Tursiops truncatus	66.62	0.00e+00	1385.00
IUUC-Vvi-131535	Vitis vinifera	46.28	9.00e-87	315.00
IUUC-Xtr-132544	Xenopus tropicalis	57.21	0.00e+00	642.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence