iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-07	30.9	567	600

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvW.Dlr 31
           H+ sv+ ++f   +++++vs++ D  +kvW D+r
   Q: 567  HNMSVYRIDFnrfNSNIFVSCGADWMVKVWeDMR 600
           88899******9766***************6655 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MATKPGKGDG KQVKGKLRTS KNKTDGPGGG GGDADDFDAW MKSRQLLKPD DQLDLTEAEL 60
GEEITKVLTP TNTNIVRNLV VYSFKEGEFV PAPLPGNTVT LIAFAGNSLH VDSDEGRRQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTATGCACT GACATTTTAA CATACATAAC TTTGAAGTAG TTCTAAAATT ATATCTGTGA 60
TGATATATCG GATATCTTTA TCCTGCTGGA TCTAAACAGC AAATCAAAAT GTTAATTTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2

SMART

SM00320--WD40

Gene Ontology

GO:0036157--C:outer dynein arm
GO:0016887--F:ATPase activity
GO:0003341--P:cilium movement
GO:0007605--P:sensory perception of sound

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001508	Ailuropoda melanoleuca	48.05	3.00e-131	461.00
IUUC-Apl-003576	Anas platyrhynchos	48.17	7.00e-140	490.00
IUUC-Aca-004263	Anolis carolinensis	47.96	5.00e-143	500.00
IUUC-Ame-010641	Astyanax mexicanus	29.03	3.00e-46	179.00
IUUC-Bta-012580	Bos taurus	48.64	3.00e-145	508.00
IUUC-Cja-018885	Callithrix jacchus	47.86	1.00e-144	506.00
IUUC-Cfa-021154	Canis familiaris	48.05	4.00e-138	484.00
IUUC-Cpo-022365	Cavia porcellus	47.70	2.00e-143	502.00
IUUC-Cre-022804	Chlamydomonas reinhardtii	41.01	5.00e-110	391.00
IUUC-Csa-023890	Chlorocebus sabaeus	47.67	4.00e-143	501.00
IUUC-Cho-024485	Choloepus hoffmanni	29.71	5.00e-41	162.00
IUUC-Cin-025296	Ciona intestinalis	49.02	2.00e-141	495.00
IUUC-Csv-026179	Ciona savignyi	50.59	2.00e-145	509.00
IUUC-Dre-027574	Danio rerio	46.67	2.00e-133	468.00
IUUC-Dno-029648	Dasypus novemcinctus	48.28	2.00e-145	508.00
IUUC-Dor-030738	Dipodomys ordii	49.23	9.00e-148	516.00
IUUC-Ete-033096	Echinops telfairi	46.50	1.00e-137	483.00
IUUC-Eca-033256	Equus caballus	47.86	2.00e-143	501.00
IUUC-Eeu-035088	Erinaceus europaeus	34.91	3.00e-14	73.20
IUUC-Fca-036388	Felis catus	48.83	1.00e-138	486.00
IUUC-Fal-036675	Ficedula albicollis	46.99	1.00e-126	446.00
IUUC-Gmo-039187	Gadus morhua	46.76	7.00e-134	470.00
IUUC-Gga-041235	Gallus gallus	52.53	2.00e-132	464.00
IUUC-Gac-042452	Gasterosteus aculeatus	47.05	1.00e-137	483.00
IUUC-Ggo-045038	Gorilla gorilla	48.83	1.00e-144	506.00
IUUC-Hsa-045904	Homo sapiens	48.64	9.00e-144	503.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	32.68	1.00e-51	196.00
IUUC-Lch-050496	Latimeria chalumnae	32.68	4.00e-54	205.00
IUUC-Loc-052443	Lepisosteus oculatus	50.29	5.00e-146	510.00
IUUC-Laf-053468	Loxodonta africana	49.13	6.00e-146	510.00
IUUC-Mcc-055368	Macaca mulatta	47.86	8.00e-144	503.00
IUUC-Meu-055996	Macropus eugenii	44.34	3.00e-119	421.00
IUUC-Mga-059689	Meleagris gallopavo	31.23	2.00e-48	186.00
IUUC-Mmr-061626	Microcebus murinus	48.00	6.00e-145	507.00
IUUC-Mdo-062267	Monodelphis domestica	49.42	5.00e-145	507.00
IUUC-Mmu-064412	Mus musculus	48.17	5.00e-145	507.00
IUUC-Mpu-066739	Mustela putorius furo	48.25	2.00e-137	481.00
IUUC-Mlu-068200	Myotis lucifugus	49.03	3.00e-146	511.00
IUUC-Nle-069649	Nomascus leucogenys	47.28	7.00e-140	490.00
IUUC-Opr-071052	Ochotona princeps	47.68	7.00e-139	486.00
IUUC-Ont-071236	Oreochromis niloticus	48.10	6.00e-141	493.00
IUUC-Oan-072791	Ornithorhynchus anatinus	45.96	2.00e-126	445.00
IUUC-Ocu-074950	Oryctolagus cuniculus	49.42	1.00e-146	513.00
IUUC-Ola-087351	Oryzias latipes	28.48	2.00e-32	131.00
IUUC-Olu-087835	Ostreococcus lucimarinus	29.72	1.00e-21	96.70
IUUC-Oga-088139	Otolemur garnettii	49.03	3.00e-144	504.00
IUUC-Oar-089578	Ovis aries	48.44	1.00e-144	506.00
IUUC-Ptr-091329	Pan troglodytes	48.44	1.00e-142	499.00
IUUC-Pan-092773	Papio anubis	48.26	1.00e-144	505.00
IUUC-Psi-093756	Pelodiscus sinensis	46.00	2.00e-132	465.00
IUUC-Pma-094402	Petromyzon marinus	47.33	2.00e-136	478.00
IUUC-Ppa-095355	Physcomitrella patens	32.90	1.00e-22	99.80
IUUC-Pfo-097027	Poecilia formosa	45.90	1.00e-128	452.00
IUUC-Pab-098475	Pongo abelii	45.33	1.00e-128	452.00
IUUC-Pca-100350	Procavia capensis	43.33	5.00e-124	437.00
IUUC-Pva-103001	Pteropus vampyrus	48.05	3.00e-143	501.00
IUUC-Rno-105185	Rattus norvegicus	48.36	6.00e-146	510.00
IUUC-Sha-106892	Sarcophilus harrisii	49.23	2.00e-148	519.00
IUUC-Smo-109353	Selaginella moellendorffii	30.46	2.00e-41	161.00
IUUC-Sar-113136	Sorex araneus	32.87	7.00e-51	194.00
IUUC-Ssc-116203	Sus scrofa	32.19	6.00e-51	194.00
IUUC-Tgu-116586	Taeniopygia guttata	49.04	9.00e-126	443.00
IUUC-Tru-118061	Takifugu rubripes	46.59	7.00e-130	457.00
IUUC-Tni-119670	Tetraodon nigroviridis	26.63	1.00e-36	147.00
IUUC-Tbe-127275	Tupaia belangeri	51.43	4.00e-129	454.00
IUUC-Ttr-128540	Tursiops truncatus	47.08	3.00e-135	474.00
IUUC-Vpa-130560	Vicugna pacos	33.47	5.00e-32	132.00
IUUC-Xtr-131755	Xenopus tropicalis	30.28	7.00e-50	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence