iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113881

Ensembl Protein ID

Sb01g021330.1

UniProt Accession

C5X1D4; C5X1D4_SORBI

Genbank Protein ID

EER94199.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G241100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g021330	Sb01g021330.1	Sb01g021330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.00e-07	29.8	287	355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp..sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawc 69
           +p+e++Cp+ +e+M+d v ++  +  ++  ++I+ +l ++   c    +++  +dl Pn+tlr++i++ +
   Q: 287  LPPELRCPLCKEVMKDAVLTSkcCFRSFCDKCIRDYLINKSM-CVCGATSILADDLLPNKTLRETINRIL 355
           79*****************997778899999*****977777.888888999**************8765 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAVYYKFKSA RDYDSIPIEG QFISVANLKE RIFESKHLGR GTDFDLMISN AQTDEEYADE 60
ATMIPKNTSV LIRRIPGRPR KPIVTEPDES KAAEDGVEQV MPTASAFLGD SSMKYHEESE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAAGGAAA AAAAAAGAGA AAATTTGAGT GGGCAAGCGA AATGGCTGTG TATTACAAGT 60
TCAAGAGTGC TAGAGACTAT GACTCAATTC CGATCGAGGG GCAATTCATC TCTGTTGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014891--DWNN_domain
IPR025829--Zn_knuckle_CX2CX3GHX4C
IPR001878--Znf_CCHC
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51282--DWNN

Pfam

PF08783--DWNN
PF13696--zf-CCHC_2

SMART

SM01180--DWNN

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_01g021330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000195	Aegilops tauschii	82.60	0.00e+00	861.00
IUUC-Aml-001655	Ailuropoda melanoleuca	29.54	6.00e-38	153.00
IUUC-Atr-002768	Amborella trichopoda	58.00	1.00e-153	535.00
IUUC-Apl-004100	Anas platyrhynchos	28.71	3.00e-26	114.00
IUUC-Aca-004345	Anolis carolinensis	35.50	6.00e-21	95.90
IUUC-Aly-006444	Arabidopsis lyrata	50.77	2.00e-144	506.00
IUUC-Ath-007648	Arabidopsis thaliana	48.05	7.00e-142	497.00
IUUC-Ago-007949	Ashbya gossypii	29.73	1.00e-19	90.10
IUUC-Acl-008118	Aspergillus clavatus	25.51	5.00e-18	85.50
IUUC-Afl-008408	Aspergillus flavus	30.13	2.00e-10	60.10
IUUC-Afu-008777	Aspergillus fumigatus	28.91	7.00e-26	111.00
IUUC-Ani-009426	Aspergillus nidulans	29.20	2.00e-33	136.00
IUUC-Ang-009735	Aspergillus niger	28.54	8.00e-27	114.00
IUUC-Aor-010213	Aspergillus oryzae	29.10	3.00e-25	109.00
IUUC-Ate-010474	Aspergillus terreus	31.95	9.00e-17	80.90
IUUC-Ame-010679	Astyanax mexicanus	30.35	2.00e-38	154.00
IUUC-Bgr-012229	Blumeria graminis	26.51	2.00e-25	109.00
IUUC-Bta-012672	Bos taurus	29.54	3.00e-38	154.00
IUUC-Bdi-014276	Brachypodium distachyon	85.32	0.00e+00	876.00
IUUC-Bol-015602	Brassica oleracea	54.76	2.00e-134	472.00
IUUC-Bra-016670	Brassica rapa	51.66	3.00e-142	498.00
IUUC-Cel-018532	Caenorhabditis elegans	27.18	4.00e-26	113.00
IUUC-Cja-018843	Callithrix jacchus	28.92	4.00e-30	127.00
IUUC-Cfa-021107	Canis familiaris	29.54	6.00e-38	153.00
IUUC-Cre-022712	Chlamydomonas reinhardtii	50.77	3.00e-12	65.90
IUUC-Csa-023397	Chlorocebus sabaeus	29.11	4.00e-36	147.00
IUUC-Cho-024327	Choloepus hoffmanni	29.27	2.00e-37	150.00
IUUC-Cin-025439	Ciona intestinalis	43.59	2.00e-15	74.70
IUUC-Csv-026162	Ciona savignyi	30.86	2.00e-10	58.50
IUUC-Cgl-026629	Colletotrichum gloeosporioides	32.42	6.00e-18	85.10
IUUC-Cne-026921	Cryptococcus neoformans	28.72	9.00e-35	140.00
IUUC-Cme-027244	Cyanidioschyzon merolae	32.86	2.00e-31	130.00
IUUC-Dre-028023	Danio rerio	30.48	1.00e-38	155.00
IUUC-Dno-029430	Dasypus novemcinctus	28.26	4.00e-36	147.00
IUUC-Dor-030406	Dipodomys ordii	27.82	3.00e-20	94.40
IUUC-Dse-031312	Dothistroma septosporum	25.38	8.00e-11	61.20
IUUC-Dme-032133	Drosophila melanogaster	52.63	6.00e-20	92.80
IUUC-Ete-032466	Echinops telfairi	33.73	4.00e-19	90.50
IUUC-Eca-033447	Equus caballus	29.08	1.00e-32	132.00
IUUC-Eeu-034677	Erinaceus europaeus	28.62	6.00e-24	106.00
IUUC-Fca-035439	Felis catus	29.54	6.00e-38	153.00
IUUC-Fal-037230	Ficedula albicollis	30.83	1.00e-39	159.00
IUUC-Fox-037976	Fusarium oxysporum	29.12	3.00e-18	85.90
IUUC-Fso-038202	Fusarium solani	28.65	2.00e-17	82.80
IUUC-Gmo-038618	Gadus morhua	32.76	2.00e-18	85.10
IUUC-Ggr-040035	Gaeumannomyces graminis	30.05	1.00e-14	74.30
IUUC-Gga-040908	Gallus gallus	30.83	3.00e-39	157.00
IUUC-Gac-041718	Gasterosteus aculeatus	28.57	4.00e-16	77.40
IUUC-Gma-044229	Glycine max	56.87	2.00e-174	605.00
IUUC-Ggo-044567	Gorilla gorilla	30.54	4.00e-37	150.00
IUUC-Hsa-046849	Homo sapiens	29.27	4.00e-36	147.00
IUUC-Hvu-047515	Hordeum vulgare	83.68	2.00e-125	441.00
IUUC-Itr-048832	Ictidomys tridecemlineatus	29.27	5.00e-38	153.00
IUUC-Kpa-049323	Komagataella pastoris	30.20	1.00e-13	70.10
IUUC-Lch-050524	Latimeria chalumnae	31.62	1.00e-40	161.00
IUUC-Lpe-050947	Leersia perrieri	81.98	0.00e+00	861.00
IUUC-Loc-052709	Lepisosteus oculatus	29.19	5.00e-35	143.00
IUUC-Lma-053186	Leptosphaeria maculans	30.06	1.00e-15	77.40
IUUC-Laf-054472	Loxodonta africana	29.54	3.00e-38	154.00
IUUC-Mcc-055743	Macaca mulatta	29.11	4.00e-36	147.00
IUUC-Meu-056399	Macropus eugenii	48.65	7.00e-16	79.70
IUUC-Mor-057073	Magnaporthe oryzae	29.89	4.00e-16	79.00
IUUC-Mpo-057378	Magnaporthe poae	29.26	2.00e-16	80.10
IUUC-Mtr-058761	Medicago truncatula	55.84	7.00e-150	523.00
IUUC-Mla-058840	Melampsora laricipopulina	33.53	2.00e-21	97.10
IUUC-Mga-060129	Meleagris gallopavo	27.85	2.00e-26	114.00
IUUC-Mvi-060424	Microbotryum violaceum	33.71	5.00e-20	92.00
IUUC-Mmr-061295	Microcebus murinus	31.62	2.00e-39	158.00
IUUC-Mdo-062295	Monodelphis domestica	29.58	6.00e-41	163.00
IUUC-Mmu-064009	Mus musculus	29.19	3.00e-37	150.00
IUUC-Mac-065479	Musa acuminata	66.78	0.00e+00	739.00
IUUC-Mpu-065875	Mustela putorius furo	29.54	4.00e-38	153.00
IUUC-Mlu-066941	Myotis lucifugus	29.54	1.00e-37	152.00
IUUC-Nfi-068518	Neosartorya fischeri	26.77	6.00e-27	115.00
IUUC-Ncr-068886	Neurospora crassa	30.94	1.00e-17	84.30
IUUC-Nle-069717	Nomascus leucogenys	29.11	5.00e-36	146.00
IUUC-Opr-070280	Ochotona princeps	29.83	5.00e-33	136.00
IUUC-Ont-071462	Oreochromis niloticus	30.42	7.00e-36	146.00
IUUC-Oan-073300	Ornithorhynchus anatinus	31.27	2.00e-29	125.00
IUUC-Ocu-074124	Oryctolagus cuniculus	29.54	3.00e-38	153.00
IUUC-Oba-075756	Oryza barthii	78.78	0.00e+00	798.00
IUUC-Obr-076580	Oryza brachyantha	86.96	0.00e+00	900.00
IUUC-Ogl-077759	Oryza glaberrima	86.61	0.00e+00	893.00
IUUC-Ogu-078657	Oryza glumaepatula	78.51	0.00e+00	791.00
IUUC-Oin-079481	Oryza indica	83.75	0.00e+00	852.00
IUUC-Olo-081062	Oryza longistaminata	78.80	0.00e+00	847.00
IUUC-Ome-081813	Oryza meridionalis	78.51	0.00e+00	789.00
IUUC-Oni-083007	Oryza nivara	78.35	0.00e+00	790.00
IUUC-Opu-083385	Oryza punctata	79.07	0.00e+00	790.00
IUUC-Oru-084861	Oryza rufipogon	78.51	0.00e+00	793.00
IUUC-Osa-085896	Oryza sativa	86.92	0.00e+00	744.00
IUUC-Ola-086693	Oryzias latipes	29.49	7.00e-30	125.00
IUUC-Olu-087631	Ostreococcus lucimarinus	45.95	2.00e-17	79.30
IUUC-Oga-088262	Otolemur garnettii	28.84	5.00e-36	146.00
IUUC-Oar-089658	Ovis aries	29.54	2.00e-38	154.00
IUUC-Ptr-091311	Pan troglodytes	30.35	1.00e-39	158.00
IUUC-Pan-091925	Papio anubis	28.84	3.00e-36	147.00
IUUC-Psi-093605	Pelodiscus sinensis	36.69	3.00e-24	107.00
IUUC-Pma-094163	Petromyzon marinus	31.53	2.00e-21	94.70
IUUC-Pno-094790	Phaeosphaeria nodorum	30.12	8.00e-13	67.80
IUUC-Ppa-095943	Physcomitrella patens	41.52	3.00e-83	302.00
IUUC-Pfo-096581	Poecilia formosa	29.13	3.00e-34	140.00
IUUC-Pab-098229	Pongo abelii	29.27	3.00e-36	147.00
IUUC-Pop-099598	Populus trichocarpa	61.12	1.00e-173	602.00
IUUC-Pca-100875	Procavia capensis	43.24	2.00e-13	72.00
IUUC-Ppe-101658	Prunus persica	58.23	2.00e-155	542.00
IUUC-Pva-102343	Pteropus vampyrus	30.54	3.00e-38	154.00
IUUC-Pgr-103275	Puccinia graminis	48.75	2.00e-18	86.70
IUUC-Ptt-104004	Puccinia triticina	31.43	1.00e-05	44.30
IUUC-Pte-104161	Pyrenophora teres	30.81	7.00e-14	71.60
IUUC-Pyt-104576	Pyrenophora triticirepentis	30.81	5.00e-14	72.00
IUUC-Rno-105264	Rattus norvegicus	29.35	7.00e-37	149.00
IUUC-Sce-106138	Saccharomyces cerevisiae	29.44	2.00e-18	85.90
IUUC-Sha-107497	Sarcophilus harrisii	29.97	7.00e-39	156.00
IUUC-Sja-107991	Schizosaccharomyces japonicus	29.37	1.00e-35	143.00
IUUC-Spo-108257	Schizosaccharomyces pombe	28.72	4.00e-36	144.00
IUUC-Ssl-108581	Sclerotinia sclerotiorum	44.00	3.00e-14	72.80
IUUC-Smo-109358	Selaginella moellendorffii	52.65	2.00e-99	355.00
IUUC-Sit-109920	Setaria italica	92.27	0.00e+00	924.00
IUUC-Sly-111616	Solanum lycopersicum	54.63	6.00e-168	583.00
IUUC-Stu-112014	Solanum tuberosum	45.29	5.00e-81	293.00
IUUC-Sar-113120	Sorex araneus	35.50	1.00e-23	105.00
IUUC-Sre-115127	Sporisorium reilianum	35.20	2.00e-22	100.00
IUUC-Ssc-116147	Sus scrofa	29.54	5.00e-38	153.00
IUUC-Tgu-117215	Taeniopygia guttata	27.53	2.00e-26	114.00
IUUC-Tru-118525	Takifugu rubripes	30.10	1.00e-33	136.00
IUUC-Tsy-119160	Tarsius syrichta	28.84	3.00e-36	147.00
IUUC-Tni-120277	Tetraodon nigroviridis	33.33	6.00e-17	79.70
IUUC-Tca-121727	Theobroma cacao	59.80	2.00e-162	565.00
IUUC-Tre-122181	Trichoderma reesei	26.83	5.00e-26	111.00
IUUC-Tvi-122316	Trichoderma virens	24.43	8.00e-26	111.00
IUUC-Tae-125622	Triticum aestivum	82.49	0.00e+00	860.00
IUUC-Tur-126827	Triticum urartu	74.84	0.00e+00	792.00
IUUC-Tme-126984	Tuber melanosporum	28.12	1.00e-30	127.00
IUUC-Tbe-127263	Tupaia belangeri	48.61	5.00e-15	77.00
IUUC-Ttr-128498	Tursiops truncatus	29.73	3.00e-36	147.00
IUUC-Uma-129457	Ustilago maydis	32.60	3.00e-24	105.00
IUUC-Vda-129986	Verticillium dahliae	26.56	1.00e-22	100.00
IUUC-Vpa-130795	Vicugna pacos	25.78	1.00e-19	91.70
IUUC-Vvi-131146	Vitis vinifera	60.36	1.00e-166	579.00
IUUC-Xtr-132789	Xenopus tropicalis	31.71	4.00e-40	160.00
IUUC-Xma-133011	Xiphophorus maculatus	30.10	4.00e-32	132.00
IUUC-Yli-134516	Yarrowia lipolytica	32.34	2.00e-20	92.40
IUUC-Zma-134699	Zea mays	94.67	0.00e+00	985.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence