iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-040086

Ensembl Protein ID

GGTG_06614T0

UniProt Accession

J3NZB5; J3NZB5_GAGT3

Genbank Protein ID

EJT76698.1

Protein Name

Ribosome assembly protein RRB1

Genbank Nucleotide ID

ADBI01000569

Gene Name

GGTG_06614

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_06614	GGTG_06614T0	GGTG_06614T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-19	67.5	324	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gH++sv ++++  s+   ++s+s Dgt++vWD+r+
   Q: 324  GHASSVEDIQWspSEaSVFASASSDGTVRVWDIRS 358
           8***********766899**************876 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MSSADPSSTV TSPKTKRPLG GEEATAGALK GGRRPGADDA MDVDEQSRPD MGEFEDEFED 60
EFESEDEIIE AGVDGRPDAE REAEEKSAMD VDGAGPGTFI VGRTKLEPGQ ILSPDPTTYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTCCG CAGATCCCTC AAGTACGGTC ACGTCCCCGA AAACGAAGCG GCCGCTCGGC 60
GGTGAAGAAG CCACGGCCGG CGCGCTCAAG GGAGGGCGCC GGCCGGGGGC CGACGATGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0042254--P:ribosome biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	35.36	2.00e-62	231.00
IUUC-Aml-002309	Ailuropoda melanoleuca	40.17	9.00e-82	295.00
IUUC-Atr-002461	Amborella trichopoda	37.95	5.00e-74	270.00
IUUC-Aca-004760	Anolis carolinensis	40.33	6.00e-77	279.00
IUUC-Aly-005405	Arabidopsis lyrata	37.11	3.00e-70	257.00
IUUC-Ath-007178	Arabidopsis thaliana	37.86	3.00e-71	260.00
IUUC-Ago-007735	Ashbya gossypii	42.77	5.00e-96	343.00
IUUC-Acl-008294	Aspergillus clavatus	65.49	5.00e-177	612.00
IUUC-Afl-008486	Aspergillus flavus	66.06	6.00e-174	602.00
IUUC-Afu-009019	Aspergillus fumigatus	65.69	2.00e-179	620.00
IUUC-Ani-009465	Aspergillus nidulans	67.75	9.00e-174	601.00
IUUC-Ang-009641	Aspergillus niger	68.65	1.00e-174	604.00
IUUC-Ate-010426	Aspergillus terreus	65.49	2.00e-176	610.00
IUUC-Ame-010856	Astyanax mexicanus	39.59	3.00e-78	284.00
IUUC-Bgr-012258	Blumeria graminis	67.56	6.00e-161	558.00
IUUC-Bta-012437	Bos taurus	39.28	6.00e-80	289.00
IUUC-Bci-013647	Botrytis cinerea	70.22	2.00e-176	610.00
IUUC-Bdi-014728	Brachypodium distachyon	37.56	7.00e-73	266.00
IUUC-Bol-015601	Brassica oleracea	38.24	2.00e-72	265.00
IUUC-Bra-017677	Brassica rapa	47.67	8.00e-41	158.00
IUUC-Cel-018454	Caenorhabditis elegans	35.08	1.00e-67	249.00
IUUC-Cja-018859	Callithrix jacchus	39.78	5.00e-80	290.00
IUUC-Cfa-020912	Canis familiaris	40.22	3.00e-83	300.00
IUUC-Cpo-021368	Cavia porcellus	40.53	3.00e-82	297.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	36.12	4.00e-35	140.00
IUUC-Csa-023599	Chlorocebus sabaeus	40.66	4.00e-80	290.00
IUUC-Cin-025718	Ciona intestinalis	40.84	1.00e-83	301.00
IUUC-Csv-025806	Ciona savignyi	42.36	9.00e-63	231.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	67.62	8.00e-162	561.00
IUUC-Cne-026781	Cryptococcus neoformans	42.30	3.00e-80	290.00
IUUC-Cme-027129	Cyanidioschyzon merolae	29.86	1.00e-37	149.00
IUUC-Dre-028225	Danio rerio	38.36	2.00e-74	271.00
IUUC-Dno-029792	Dasypus novemcinctus	39.27	2.00e-75	274.00
IUUC-Dor-030773	Dipodomys ordii	35.29	2.00e-30	125.00
IUUC-Dse-031289	Dothistroma septosporum	63.92	2.00e-159	553.00
IUUC-Dme-031676	Drosophila melanogaster	37.55	3.00e-75	274.00
IUUC-Eca-033618	Equus caballus	40.95	6.00e-79	286.00
IUUC-Fca-036102	Felis catus	39.17	7.00e-78	282.00
IUUC-Fox-037899	Fusarium oxysporum	74.85	0.00e+00	689.00
IUUC-Fso-038130	Fusarium solani	76.42	0.00e+00	697.00
IUUC-Gmo-038741	Gadus morhua	37.96	4.00e-73	266.00
IUUC-Gac-042243	Gasterosteus aculeatus	37.41	2.00e-74	271.00
IUUC-Gma-044177	Glycine max	38.44	7.00e-70	256.00
IUUC-Ggo-044564	Gorilla gorilla	40.53	5.00e-82	296.00
IUUC-Hsa-046021	Homo sapiens	40.22	7.00e-81	292.00
IUUC-Hvu-047721	Hordeum vulgare	35.44	1.00e-69	255.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	40.31	2.00e-79	287.00
IUUC-Kpa-049271	Komagataella pastoris	46.65	1.00e-103	368.00
IUUC-Lch-049974	Latimeria chalumnae	38.62	3.00e-79	287.00
IUUC-Lpe-051388	Leersia perrieri	34.03	2.00e-61	228.00
IUUC-Lma-053010	Leptosphaeria maculans	65.16	2.00e-167	580.00
IUUC-Laf-054058	Loxodonta africana	40.77	1.00e-82	298.00
IUUC-Mcc-055246	Macaca mulatta	40.44	4.00e-80	290.00
IUUC-Meu-056795	Macropus eugenii	39.25	4.00e-76	276.00
IUUC-Mor-057175	Magnaporthe oryzae	83.46	0.00e+00	800.00
IUUC-Mpo-057388	Magnaporthe poae	87.19	0.00e+00	728.00
IUUC-Mtr-057752	Medicago truncatula	36.57	6.00e-67	246.00
IUUC-Mla-058904	Melampsora laricipopulina	42.99	2.00e-86	311.00
IUUC-Mvi-060525	Microbotryum violaceum	44.14	9.00e-82	295.00
IUUC-Mmr-060905	Microcebus murinus	42.01	9.00e-82	295.00
IUUC-Mmu-063428	Mus musculus	39.48	4.00e-81	293.00
IUUC-Mac-065276	Musa acuminata	39.91	2.00e-70	258.00
IUUC-Mpu-066062	Mustela putorius furo	40.38	4.00e-81	293.00
IUUC-Mlu-068115	Myotis lucifugus	49.78	1.00e-57	214.00
IUUC-Nfi-068512	Neosartorya fischeri	65.69	4.00e-175	605.00
IUUC-Ncr-068629	Neurospora crassa	75.95	0.00e+00	689.00
IUUC-Nle-070016	Nomascus leucogenys	40.35	6.00e-80	289.00
IUUC-Ont-072230	Oreochromis niloticus	38.11	5.00e-74	270.00
IUUC-Oan-072759	Ornithorhynchus anatinus	29.95	2.00e-48	184.00
IUUC-Ocu-074511	Oryctolagus cuniculus	37.90	2.00e-75	275.00
IUUC-Oba-075093	Oryza barthii	34.63	3.00e-61	227.00
IUUC-Obr-076130	Oryza brachyantha	37.92	4.00e-71	260.00
IUUC-Ogl-077397	Oryza glaberrima	36.70	4.00e-71	260.00
IUUC-Ogu-078111	Oryza glumaepatula	35.43	7.00e-62	231.00
IUUC-Oin-079162	Oryza indica	35.09	3.00e-64	237.00
IUUC-Olo-080909	Oryza longistaminata	29.32	1.00e-43	169.00
IUUC-Ome-081768	Oryza meridionalis	35.10	2.00e-63	234.00
IUUC-Oni-082453	Oryza nivara	35.09	1.00e-63	236.00
IUUC-Opu-084133	Oryza punctata	33.81	9.00e-58	216.00
IUUC-Oru-085056	Oryza rufipogon	33.60	5.00e-50	189.00
IUUC-Osa-085735	Oryza sativa	36.47	3.00e-71	261.00
IUUC-Ola-087066	Oryzias latipes	37.79	4.00e-69	253.00
IUUC-Olu-087594	Ostreococcus lucimarinus	36.07	1.00e-65	241.00
IUUC-Oga-087974	Otolemur garnettii	40.75	3.00e-81	293.00
IUUC-Oar-089902	Ovis aries	39.06	2.00e-78	284.00
IUUC-Ptr-090469	Pan troglodytes	38.89	2.00e-76	277.00
IUUC-Pan-092858	Papio anubis	40.44	2.00e-80	291.00
IUUC-Psi-094092	Pelodiscus sinensis	36.81	3.00e-38	150.00
IUUC-Pno-094919	Phaeosphaeria nodorum	65.08	2.00e-154	536.00
IUUC-Ppa-095849	Physcomitrella patens	35.56	7.00e-74	269.00
IUUC-Pfo-096535	Poecilia formosa	39.02	1.00e-76	278.00
IUUC-Pab-098478	Pongo abelii	40.00	4.00e-80	290.00
IUUC-Pop-100032	Populus trichocarpa	38.55	2.00e-72	264.00
IUUC-Pca-100403	Procavia capensis	44.63	8.00e-64	235.00
IUUC-Ppe-101997	Prunus persica	38.27	2.00e-72	265.00
IUUC-Pva-102423	Pteropus vampyrus	40.83	2.00e-81	295.00
IUUC-Pgr-103339	Puccinia graminis	41.36	1.00e-86	312.00
IUUC-Ptt-103937	Puccinia triticina	41.04	1.00e-85	308.00
IUUC-Pte-104051	Pyrenophora teres	62.87	2.00e-155	540.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	63.87	1.00e-157	548.00
IUUC-Rno-106118	Rattus norvegicus	40.81	4.00e-79	286.00
IUUC-Sce-106330	Saccharomyces cerevisiae	45.37	8.00e-98	349.00
IUUC-Sha-106564	Sarcophilus harrisii	39.41	4.00e-63	233.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	45.13	9.00e-98	348.00
IUUC-Spo-108351	Schizosaccharomyces pombe	46.54	6.00e-105	372.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	71.33	2.00e-179	620.00
IUUC-Smo-109619	Selaginella moellendorffii	36.74	5.00e-74	270.00
IUUC-Sit-110719	Setaria italica	36.65	3.00e-68	251.00
IUUC-Sly-111245	Solanum lycopersicum	34.86	5.00e-60	223.00
IUUC-Stu-112645	Solanum tuberosum	35.17	9.00e-65	239.00
IUUC-Sar-113342	Sorex araneus	38.39	3.00e-71	260.00
IUUC-Sbi-114359	Sorghum bicolor	36.43	9.00e-69	252.00
IUUC-Sre-115098	Sporisorium reilianum	45.80	3.00e-87	314.00
IUUC-Ssc-115496	Sus scrofa	40.53	5.00e-81	293.00
IUUC-Tru-117662	Takifugu rubripes	37.73	3.00e-74	270.00
IUUC-Tni-120564	Tetraodon nigroviridis	37.53	3.00e-62	230.00
IUUC-Tca-121710	Theobroma cacao	37.61	5.00e-75	273.00
IUUC-Tre-122239	Trichoderma reesei	73.08	0.00e+00	650.00
IUUC-Tvi-122589	Trichoderma virens	73.58	0.00e+00	640.00
IUUC-Tae-124597	Triticum aestivum	36.79	5.00e-74	270.00
IUUC-Tur-126135	Triticum urartu	37.39	1.00e-57	216.00
IUUC-Tme-127073	Tuber melanosporum	48.94	2.00e-112	397.00
IUUC-Ttr-128383	Tursiops truncatus	40.44	8.00e-79	285.00
IUUC-Uma-129345	Ustilago maydis	45.62	2.00e-93	335.00
IUUC-Vda-129893	Verticillium dahliae	73.40	0.00e+00	684.00
IUUC-Vvi-131067	Vitis vinifera	37.95	6.00e-73	266.00
IUUC-Xtr-132603	Xenopus tropicalis	38.36	2.00e-78	284.00
IUUC-Xma-133149	Xiphophorus maculatus	38.80	8.00e-78	282.00
IUUC-Yli-134459	Yarrowia lipolytica	45.59	1.00e-107	381.00
IUUC-Zma-135548	Zea mays	36.55	2.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence