iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112234

Ensembl Protein ID

PGSC0003DMT400078166

UniProt Accession

M1CZI6; M1CZI6_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400030407	PGSC0003DMT400078166	PGSC0003DMT400078166
PGSC0003DMG400030407	PGSC0003DMT400078167	PGSC0003DMT400078167

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-33	114.6	256	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv+++sG+ty+rssIekwl+ g++tcP+t+q lt++ ++Pn++lr+li +wce n++
   Q: 256  IPDDFRCPISLELMKDPVIVSSGQTYERSSIEKWLEAGHSTCPKTQQVLTSNVVTPNYVLRSLIAQWCEMNGV 328
           89*******************************************************************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEEERGVLVQ KLIEVVNEIA AISDFRTWVK KEYCNLARRL KLLIPMFEEI RDIKEPLPEN 60
SMIALVSLKE ALESTKELLK FGSEGSKIYL VLEREQIMNK FHQVTTQLEQ ALGGVHYEEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTAAACGG TTACTGAAAA ACCCACCAAT AAACCTGTTT TTTTCTTCTT CTTCACAGAT 60
CCAGTTATAC CCCACACTTC AATTCACCGC CGGTAACAAT TAGCCGACAA GTACCTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102593028

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lch-050378	Latimeria chalumnae	28.57	1.00e-10	61.60
IUUC-Sly-111146	Solanum lycopersicum	96.67	0.00e+00	1308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence