iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d031263	Zm00001d031263_T001	Zm00001d031263_T001
Zm00001d031263	Zm00001d031263_T002	Zm00001d031263_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-30	106.9	271	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p +flCpI+l +M+dPv+++sG+ty+r+sI+kwl+ g++tcP+ rqpl++ +l Pn++l++li +wce+n 
   Q: 271  IPNDFLCPITLGIMTDPVIVASGQTYERRSIQKWLDGGERTCPKSRQPLAHLSLAPNYALKNLILQWCERNM 342
           799******************************************************************996 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPPPPTLPPS SPDDPAEPSS MGREMDDEDL VEELLLTVNA ARAFAEFRRT QRKECANLLR 60
WLQLVLPLLE ELRDAAPRLT DDAYRRLALL GRALAAARRL LRTCHDGSKI YLALESETVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATGCAGGGG GCACCGCACT AACTATACAT AGCAATTCTC CATTTTTTAT TTTCTTGTGC 60
CGTGTCTGGC TGGCCCAGAG CGTCGGAGCG CTTGATGCCG CCGCCACCAA CGCTGCCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

zma:103641388

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000398	Aegilops tauschii	77.48	0.00e+00	878.00
IUUC-Bdi-014851	Brachypodium distachyon	77.08	0.00e+00	862.00
IUUC-Hvu-047325	Hordeum vulgare	78.93	0.00e+00	890.00
IUUC-Lch-050378	Latimeria chalumnae	34.69	2.00e-10	61.20
IUUC-Lpe-051266	Leersia perrieri	75.44	0.00e+00	895.00
IUUC-Oba-075533	Oryza barthii	80.39	0.00e+00	916.00
IUUC-Obr-076561	Oryza brachyantha	80.16	0.00e+00	909.00
IUUC-Ogl-077209	Oryza glaberrima	80.39	0.00e+00	916.00
IUUC-Ogu-078607	Oryza glumaepatula	80.72	0.00e+00	918.00
IUUC-Oin-080162	Oryza indica	80.72	0.00e+00	918.00
IUUC-Olo-080856	Oryza longistaminata	80.39	0.00e+00	916.00
IUUC-Ome-081763	Oryza meridionalis	80.56	0.00e+00	917.00
IUUC-Oni-082893	Oryza nivara	80.72	0.00e+00	918.00
IUUC-Opu-084068	Oryza punctata	80.59	0.00e+00	919.00
IUUC-Oru-085267	Oryza rufipogon	80.72	0.00e+00	918.00
IUUC-Osa-085448	Oryza sativa	80.72	0.00e+00	918.00
IUUC-Sit-110463	Setaria italica	86.57	0.00e+00	950.00
IUUC-Sbi-114691	Sorghum bicolor	88.40	0.00e+00	1003.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence