iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019425

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01101350

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000005749.2	ENSCJAT00000011259.2	ENSCJAP00000010659.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-42	142.8	675	705
UBD/Beta-Prp	6.20e-94	315.5	35	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +++cla  ++ +++vs+s+D+++++W+
   Q: 675  GHHQEIWCLAVsPNgDYVVSSSHDKSLRLWE 705
           78899*******777***************8 PP

UBD/Beta-Prp

   S: 64   gkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnll 152
           +  +v +   +++ +wdl++g+ + +l+g +++v++l  sp+g +l++G +d  ir++ l +g+    t++gh++ ++++++++ g  l
   Q: 35   KGRYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYDDGSIRIFSLLSGEGNV-TFNGHKAGITTLKYDQLGGRL 122
           555555556677889**************************************************99.********************* PP
   S: 153  vsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs 241
           +sGs+D+ + +Wd+ +++ l++l+g h+d+++   f ++++ lv+ ++d+ vk wdl t++c +t+ gh++ v+ + + ++++rl++g+
   Q: 123  ASGSKDTDIIVWDVINESGLYRLKG-HKDAITQALFLREKNLLVTSGKDTVVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGA 210
           ***********************99.*************************************************************** PP
   S: 242  sDgsiriWdlrsgdllktlqlhn 264
           sD  +r Wd++  + +  l+ ++
   Q: 211  SDSELRAWDITYLQEIEDLEEPK 233
           ********998777666666655 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DLRKGEKILI 60
LQGLKQEVTC LCPSPDGLHL AVGYDDGSIR IFSLLSGEGN VTFNGHKAGI TTLKYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCCAATCG CCTGGGAGCC TCGTGGAAGC TGAGGTGAGT CCTGGAGGTG CACGGCTGGG 60
TCTGAGAGCC TTTCTCAGCG GTTTGGCCTT TGAAGAATCT GGCTGAGGCA TTCGTGATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	38.18	2.00e-149	523.00
IUUC-Aml-001245	Ailuropoda melanoleuca	93.33	0.00e+00	1661.00
IUUC-Atr-002700	Amborella trichopoda	40.06	2.00e-180	626.00
IUUC-Apl-004164	Anas platyrhynchos	77.92	0.00e+00	1055.00
IUUC-Aca-004765	Anolis carolinensis	74.68	0.00e+00	1370.00
IUUC-Aly-006503	Arabidopsis lyrata	38.86	3.00e-179	622.00
IUUC-Ath-006848	Arabidopsis thaliana	39.49	0.00e+00	634.00
IUUC-Ago-007909	Ashbya gossypii	35.06	3.00e-147	516.00
IUUC-Acl-008238	Aspergillus clavatus	38.78	0.00e+00	644.00
IUUC-Afl-008544	Aspergillus flavus	38.87	0.00e+00	630.00
IUUC-Afu-008868	Aspergillus fumigatus	38.57	0.00e+00	638.00
IUUC-Ani-009367	Aspergillus nidulans	38.46	6.00e-179	621.00
IUUC-Ang-009732	Aspergillus niger	39.18	0.00e+00	644.00
IUUC-Aor-010140	Aspergillus oryzae	38.94	0.00e+00	632.00
IUUC-Ate-010572	Aspergillus terreus	38.69	0.00e+00	634.00
IUUC-Ame-010956	Astyanax mexicanus	64.38	0.00e+00	1146.00
IUUC-Bgr-012296	Blumeria graminis	36.33	3.00e-174	605.00
IUUC-Bta-012716	Bos taurus	93.12	0.00e+00	1661.00
IUUC-Bci-013699	Botrytis cinerea	37.28	8.00e-171	594.00
IUUC-Bdi-014525	Brachypodium distachyon	38.30	2.00e-163	569.00
IUUC-Bol-015117	Brassica oleracea	38.93	4.00e-178	618.00
IUUC-Bra-016869	Brassica rapa	38.92	2.00e-179	622.00
IUUC-Cel-018570	Caenorhabditis elegans	34.02	1.00e-131	463.00
IUUC-Cfa-020787	Canis familiaris	91.96	0.00e+00	1664.00
IUUC-Cpo-021729	Cavia porcellus	93.26	0.00e+00	1204.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	43.58	8.00e-105	375.00
IUUC-Csa-024098	Chlorocebus sabaeus	95.66	0.00e+00	1733.00
IUUC-Cho-024495	Choloepus hoffmanni	78.34	0.00e+00	926.00
IUUC-Cin-025245	Ciona intestinalis	49.08	3.00e-169	588.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.89	2.00e-170	592.00
IUUC-Cne-026835	Cryptococcus neoformans	46.40	3.00e-130	459.00
IUUC-Cme-027162	Cyanidioschyzon merolae	25.88	2.00e-37	151.00
IUUC-Dre-027874	Danio rerio	70.92	0.00e+00	1312.00
IUUC-Dno-028905	Dasypus novemcinctus	92.49	0.00e+00	1674.00
IUUC-Dor-030383	Dipodomys ordii	88.45	0.00e+00	828.00
IUUC-Dse-031297	Dothistroma septosporum	37.63	8.00e-169	587.00
IUUC-Dme-031956	Drosophila melanogaster	41.43	0.00e+00	688.00
IUUC-Ete-032608	Echinops telfairi	83.45	0.00e+00	930.00
IUUC-Eca-034181	Equus caballus	93.02	0.00e+00	1650.00
IUUC-Eeu-034495	Erinaceus europaeus	91.61	0.00e+00	1590.00
IUUC-Fca-035994	Felis catus	92.25	0.00e+00	1555.00
IUUC-Fal-036611	Ficedula albicollis	76.73	0.00e+00	1349.00
IUUC-Fox-037807	Fusarium oxysporum	37.34	6.00e-175	608.00
IUUC-Fso-038090	Fusarium solani	37.10	3.00e-171	595.00
IUUC-Gmo-039018	Gadus morhua	64.06	0.00e+00	698.00
IUUC-Ggr-039748	Gaeumannomyces graminis	36.90	4.00e-174	605.00
IUUC-Gga-040707	Gallus gallus	78.57	0.00e+00	1366.00
IUUC-Gac-042334	Gasterosteus aculeatus	63.54	0.00e+00	681.00
IUUC-Gma-043860	Glycine max	38.20	2.00e-174	606.00
IUUC-Ggo-045334	Gorilla gorilla	95.98	0.00e+00	1695.00
IUUC-Hsa-046996	Homo sapiens	95.45	0.00e+00	1684.00
IUUC-Hvu-047381	Hordeum vulgare	34.33	2.00e-87	316.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	92.70	0.00e+00	1642.00
IUUC-Kpa-049185	Komagataella pastoris	34.38	2.00e-146	513.00
IUUC-Lch-050098	Latimeria chalumnae	67.74	0.00e+00	1178.00
IUUC-Lpe-050710	Leersia perrieri	36.76	7.00e-157	548.00
IUUC-Loc-052745	Lepisosteus oculatus	68.35	0.00e+00	1220.00
IUUC-Lma-053104	Leptosphaeria maculans	38.52	1.00e-179	624.00
IUUC-Laf-054395	Loxodonta africana	91.75	0.00e+00	1629.00
IUUC-Mcc-055077	Macaca mulatta	95.87	0.00e+00	1726.00
IUUC-Meu-056418	Macropus eugenii	82.38	0.00e+00	729.00
IUUC-Mor-057031	Magnaporthe oryzae	37.35	2.00e-159	556.00
IUUC-Mpo-057420	Magnaporthe poae	36.46	9.00e-163	567.00
IUUC-Mtr-057838	Medicago truncatula	38.24	0.00e+00	637.00
IUUC-Mla-058854	Melampsora laricipopulina	37.25	1.00e-164	574.00
IUUC-Mga-060120	Meleagris gallopavo	73.91	0.00e+00	1266.00
IUUC-Mvi-060407	Microbotryum violaceum	44.11	1.00e-140	494.00
IUUC-Mmr-060635	Microcebus murinus	92.81	0.00e+00	1634.00
IUUC-Mdo-063023	Monodelphis domestica	86.88	0.00e+00	1598.00
IUUC-Mmu-064103	Mus musculus	89.64	0.00e+00	1618.00
IUUC-Mac-065569	Musa acuminata	38.42	2.00e-174	606.00
IUUC-Mpu-066462	Mustela putorius furo	92.70	0.00e+00	1674.00
IUUC-Mlu-067894	Myotis lucifugus	93.23	0.00e+00	1691.00
IUUC-Nfi-068321	Neosartorya fischeri	38.53	0.00e+00	636.00
IUUC-Ncr-068661	Neurospora crassa	37.19	1.00e-171	597.00
IUUC-Nle-069409	Nomascus leucogenys	95.77	0.00e+00	1702.00
IUUC-Opr-070445	Ochotona princeps	82.79	0.00e+00	1503.00
IUUC-Ont-072339	Oreochromis niloticus	69.33	0.00e+00	1261.00
IUUC-Oan-073688	Ornithorhynchus anatinus	76.52	0.00e+00	1352.00
IUUC-Ocu-074227	Oryctolagus cuniculus	94.07	0.00e+00	1707.00
IUUC-Oba-075635	Oryza barthii	36.83	5.00e-152	531.00
IUUC-Obr-076897	Oryza brachyantha	37.61	5.00e-164	571.00
IUUC-Ogl-077555	Oryza glaberrima	36.73	1.00e-151	530.00
IUUC-Ogu-078724	Oryza glumaepatula	36.83	6.00e-153	535.00
IUUC-Oin-080030	Oryza indica	36.83	5.00e-152	531.00
IUUC-Olo-080687	Oryza longistaminata	34.88	2.00e-140	493.00
IUUC-Ome-081867	Oryza meridionalis	36.94	3.00e-153	536.00
IUUC-Oni-082559	Oryza nivara	36.83	6.00e-152	531.00
IUUC-Opu-083332	Oryza punctata	39.53	6.00e-143	501.00
IUUC-Oru-084455	Oryza rufipogon	36.83	3.00e-152	532.00
IUUC-Osa-085793	Oryza sativa	36.83	3.00e-152	532.00
IUUC-Ola-087395	Oryzias latipes	68.43	0.00e+00	1169.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.49	3.00e-157	549.00
IUUC-Oga-088574	Otolemur garnettii	93.76	0.00e+00	1696.00
IUUC-Oar-089453	Ovis aries	90.92	0.00e+00	1639.00
IUUC-Ptr-090694	Pan troglodytes	95.56	0.00e+00	1681.00
IUUC-Pan-092420	Papio anubis	95.87	0.00e+00	1733.00
IUUC-Psi-093683	Pelodiscus sinensis	81.46	0.00e+00	1447.00
IUUC-Pma-094197	Petromyzon marinus	56.58	2.00e-70	258.00
IUUC-Pno-094783	Phaeosphaeria nodorum	37.47	6.00e-178	618.00
IUUC-Ppa-095208	Physcomitrella patens	39.06	1.00e-173	603.00
IUUC-Pfo-096299	Poecilia formosa	68.78	0.00e+00	1273.00
IUUC-Pab-098706	Pongo abelii	95.56	0.00e+00	1694.00
IUUC-Pop-099275	Populus trichocarpa	38.77	1.00e-175	610.00
IUUC-Pca-100796	Procavia capensis	77.10	0.00e+00	1225.00
IUUC-Ppe-101861	Prunus persica	39.89	0.00e+00	638.00
IUUC-Pva-103241	Pteropus vampyrus	87.95	0.00e+00	1506.00
IUUC-Pgr-103432	Puccinia graminis	35.91	9.00e-163	567.00
IUUC-Ptt-103742	Puccinia triticina	35.11	1.00e-149	523.00
IUUC-Pte-104069	Pyrenophora teres	37.53	3.00e-168	585.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.94	3.00e-174	605.00
IUUC-Rno-105219	Rattus norvegicus	89.32	0.00e+00	1580.00
IUUC-Sce-106271	Saccharomyces cerevisiae	37.62	1.00e-160	560.00
IUUC-Sha-107550	Sarcophilus harrisii	87.24	0.00e+00	1597.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	37.59	3.00e-169	588.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.24	7.00e-172	597.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	38.00	4.00e-175	608.00
IUUC-Smo-108974	Selaginella moellendorffii	39.08	3.00e-169	588.00
IUUC-Sit-110000	Setaria italica	37.89	1.00e-155	543.00
IUUC-Sly-111595	Solanum lycopersicum	38.69	7.00e-179	620.00
IUUC-Stu-112516	Solanum tuberosum	38.55	3.00e-178	619.00
IUUC-Sar-113195	Sorex araneus	82.88	0.00e+00	1318.00
IUUC-Sbi-114465	Sorghum bicolor	36.70	3.00e-164	572.00
IUUC-Sre-115006	Sporisorium reilianum	34.68	6.00e-154	538.00
IUUC-Ssc-115929	Sus scrofa	92.17	0.00e+00	1622.00
IUUC-Tgu-117282	Taeniopygia guttata	76.95	0.00e+00	1351.00
IUUC-Tru-118406	Takifugu rubripes	68.14	0.00e+00	1212.00
IUUC-Tsy-119170	Tarsius syrichta	92.82	0.00e+00	1670.00
IUUC-Tni-119721	Tetraodon nigroviridis	66.70	0.00e+00	1188.00
IUUC-Tca-121761	Theobroma cacao	39.56	0.00e+00	641.00
IUUC-Tre-121908	Trichoderma reesei	36.49	3.00e-171	595.00
IUUC-Tvi-122547	Trichoderma virens	37.40	1.00e-173	603.00
IUUC-Tae-125496	Triticum aestivum	38.50	6.00e-161	561.00
IUUC-Tur-126811	Triticum urartu	40.02	6.00e-161	561.00
IUUC-Tme-126987	Tuber melanosporum	38.21	0.00e+00	636.00
IUUC-Tbe-127315	Tupaia belangeri	93.63	0.00e+00	867.00
IUUC-Ttr-129165	Tursiops truncatus	83.60	0.00e+00	1426.00
IUUC-Uma-129651	Ustilago maydis	35.04	3.00e-155	542.00
IUUC-Vda-129973	Verticillium dahliae	38.30	2.00e-167	583.00
IUUC-Vpa-130163	Vicugna pacos	83.37	0.00e+00	731.00
IUUC-Vvi-131402	Vitis vinifera	37.33	3.00e-179	622.00
IUUC-Xtr-132296	Xenopus tropicalis	73.71	0.00e+00	1302.00
IUUC-Xma-133028	Xiphophorus maculatus	68.78	0.00e+00	1274.00
IUUC-Yli-134484	Yarrowia lipolytica	37.94	5.00e-159	555.00
IUUC-Zma-135938	Zea mays	36.32	5.00e-162	565.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence