iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132296

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01119649

Gene Name

wdr3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000009920.3	ENSXETT00000021860.3	ENSXETP00000021860.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-38	128.5	671	701
UBD/Beta-Prp	1.50e-94	316.7	548	763

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH ++v+cla  ++ +++vs+s+D+++++W+
   Q: 671  GHHGEVWCLAVsPNgDHVVSSSHDKSLRLWE 701
           7999********777***************8 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ++v++ v +sp++++la++  d t+kv+ ++t k++ sl+gh+ +v ++++ +d  ++v g  Dr++k+w l+ g+c ++l +hedsv+
   Q: 548  EDVLC-VRYSPNGRILAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDICHDNGLFVPGFADRNVKIWGLDLGDCHRSLFAHEDSVM 635
           45565.*********************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvysl 186
            l+f p+++ + s+++dr ++ wd ++ q ++ tl+gh+g v+c++v+p+g+ +vs+s D+ +rlW   ++ l+ +  ++ + ++ y  
   Q: 636  FLQFVPKTHLFFSAGKDRKVKQWDADHFQQVQ-TLEGHHGEVWCLAVSPNGDHVVSSSHDKSLRLWERTREPLILEEeKEMQREAEYEE 723
           ********************************.**********************************9666665544377788888888 PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           s+ + ++ +v+g + g v l     +++++t+++ ++ +  ++
   Q: 724  SVAKGQQPVVAGEREGEVGLAG---KKTIETVKATERIMEAIE 763
           8999999999999999997643...334445555444444444 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MGLTKQYLRY AASAVFGLIA NQKANVAFIT LRGERGRYVA VGACEHVFIW DTRRGEKVLI 60
LQGQKQEVTR LCPSPDGLSL AVGYEDGSIR IFSLLSGESG ITFNGHKAAV TALNYDHLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCATTCTGC CCCTTTGGTA CCTACCCCCT CCCCCGCAGC CATTTTTTTA ACCCTATACT 60
GTATTGAACT GACCCCCCTA TTCTGTTTGT GTTTTTGCCC AAGGTTCCAA CTTACCCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.87	5.00e-145	508.00
IUUC-Aml-001245	Ailuropoda melanoleuca	73.17	0.00e+00	1302.00
IUUC-Atr-002700	Amborella trichopoda	39.36	8.00e-175	607.00
IUUC-Apl-004164	Anas platyrhynchos	72.40	0.00e+00	963.00
IUUC-Aca-004765	Anolis carolinensis	70.12	0.00e+00	1269.00
IUUC-Aly-006503	Arabidopsis lyrata	39.68	1.00e-171	597.00
IUUC-Ath-006848	Arabidopsis thaliana	39.64	9.00e-176	610.00
IUUC-Ago-007909	Ashbya gossypii	35.04	3.00e-151	528.00
IUUC-Acl-008238	Aspergillus clavatus	38.57	0.00e+00	632.00
IUUC-Afl-008544	Aspergillus flavus	37.68	4.00e-174	605.00
IUUC-Afu-008868	Aspergillus fumigatus	38.38	1.00e-178	620.00
IUUC-Ani-009367	Aspergillus nidulans	38.20	1.00e-175	610.00
IUUC-Ang-009732	Aspergillus niger	38.47	4.00e-178	618.00
IUUC-Aor-010140	Aspergillus oryzae	37.75	9.00e-175	607.00
IUUC-Ate-010572	Aspergillus terreus	38.62	3.00e-178	619.00
IUUC-Ame-010956	Astyanax mexicanus	72.24	0.00e+00	808.00
IUUC-Bgr-012296	Blumeria graminis	36.43	4.00e-171	595.00
IUUC-Bta-012716	Bos taurus	72.93	0.00e+00	1313.00
IUUC-Bci-013699	Botrytis cinerea	36.12	8.00e-163	567.00
IUUC-Bdi-014525	Brachypodium distachyon	37.14	3.00e-162	565.00
IUUC-Bol-015117	Brassica oleracea	39.17	1.00e-169	590.00
IUUC-Bra-016869	Brassica rapa	39.40	2.00e-171	596.00
IUUC-Cel-018570	Caenorhabditis elegans	34.55	1.00e-135	477.00
IUUC-Cja-019425	Callithrix jacchus	73.71	0.00e+00	1309.00
IUUC-Cfa-020787	Canis familiaris	73.38	0.00e+00	1303.00
IUUC-Cpo-021729	Cavia porcellus	72.78	0.00e+00	928.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.75	5.00e-101	362.00
IUUC-Csa-024098	Chlorocebus sabaeus	73.06	0.00e+00	1301.00
IUUC-Cho-024495	Choloepus hoffmanni	63.47	0.00e+00	720.00
IUUC-Cin-025245	Ciona intestinalis	47.62	4.00e-159	554.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.50	8.00e-170	590.00
IUUC-Cne-026835	Cryptococcus neoformans	45.96	5.00e-133	468.00
IUUC-Cme-027162	Cyanidioschyzon merolae	25.67	7.00e-39	155.00
IUUC-Dre-027874	Danio rerio	70.31	0.00e+00	1275.00
IUUC-Dno-028905	Dasypus novemcinctus	72.84	0.00e+00	1292.00
IUUC-Dor-030383	Dipodomys ordii	71.16	0.00e+00	647.00
IUUC-Dse-031297	Dothistroma septosporum	35.96	3.00e-162	565.00
IUUC-Dme-031956	Drosophila melanogaster	40.77	0.00e+00	663.00
IUUC-Ete-032608	Echinops telfairi	64.92	0.00e+00	702.00
IUUC-Eca-034181	Equus caballus	73.25	0.00e+00	1277.00
IUUC-Eeu-034495	Erinaceus europaeus	73.77	0.00e+00	1255.00
IUUC-Fca-035994	Felis catus	73.83	0.00e+00	1230.00
IUUC-Fal-036611	Ficedula albicollis	72.79	0.00e+00	1261.00
IUUC-Fox-037807	Fusarium oxysporum	36.10	1.00e-169	590.00
IUUC-Fso-038090	Fusarium solani	36.72	6.00e-167	581.00
IUUC-Gmo-039018	Gadus morhua	61.75	0.00e+00	660.00
IUUC-Ggr-039748	Gaeumannomyces graminis	39.38	3.00e-178	619.00
IUUC-Gga-040707	Gallus gallus	73.36	0.00e+00	1248.00
IUUC-Gac-042334	Gasterosteus aculeatus	60.78	0.00e+00	641.00
IUUC-Gma-043033	Glycine max	43.45	2.00e-126	446.00
IUUC-Ggo-045334	Gorilla gorilla	73.71	0.00e+00	1289.00
IUUC-Hsa-046996	Homo sapiens	73.49	0.00e+00	1283.00
IUUC-Hvu-047381	Hordeum vulgare	34.33	2.00e-83	303.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	72.42	0.00e+00	1270.00
IUUC-Kpa-049185	Komagataella pastoris	33.02	1.00e-146	513.00
IUUC-Lch-050098	Latimeria chalumnae	64.59	0.00e+00	1082.00
IUUC-Lpe-050710	Leersia perrieri	36.73	9.00e-161	560.00
IUUC-Loc-052745	Lepisosteus oculatus	66.74	0.00e+00	1169.00
IUUC-Lma-053104	Leptosphaeria maculans	36.74	1.00e-172	601.00
IUUC-Laf-054395	Loxodonta africana	73.60	0.00e+00	1282.00
IUUC-Mcc-055077	Macaca mulatta	73.28	0.00e+00	1296.00
IUUC-Meu-056418	Macropus eugenii	69.33	8.00e-176	610.00
IUUC-Mor-057031	Magnaporthe oryzae	37.53	4.00e-157	548.00
IUUC-Mpo-057420	Magnaporthe poae	38.50	4.00e-172	598.00
IUUC-Mtr-057838	Medicago truncatula	38.40	0.00e+00	632.00
IUUC-Mla-058854	Melampsora laricipopulina	36.42	2.00e-157	549.00
IUUC-Mga-060120	Meleagris gallopavo	69.58	0.00e+00	1141.00
IUUC-Mvi-060407	Microbotryum violaceum	44.44	1.00e-139	491.00
IUUC-Mmr-060635	Microcebus murinus	71.61	0.00e+00	1276.00
IUUC-Mdo-063023	Monodelphis domestica	73.60	0.00e+00	1308.00
IUUC-Mmu-064103	Mus musculus	72.01	0.00e+00	1294.00
IUUC-Mac-065569	Musa acuminata	37.78	8.00e-172	597.00
IUUC-Mpu-066462	Mustela putorius furo	73.57	0.00e+00	1304.00
IUUC-Mlu-067894	Myotis lucifugus	73.81	0.00e+00	1305.00
IUUC-Nfi-068321	Neosartorya fischeri	38.43	3.00e-176	612.00
IUUC-Ncr-068661	Neurospora crassa	37.36	1.00e-171	597.00
IUUC-Nle-069409	Nomascus leucogenys	73.17	0.00e+00	1286.00
IUUC-Opr-070445	Ochotona princeps	70.28	0.00e+00	788.00
IUUC-Ont-072339	Oreochromis niloticus	69.87	0.00e+00	1236.00
IUUC-Oan-073688	Ornithorhynchus anatinus	71.29	0.00e+00	1236.00
IUUC-Ocu-074227	Oryctolagus cuniculus	73.81	0.00e+00	1309.00
IUUC-Oba-075635	Oryza barthii	38.31	3.00e-154	539.00
IUUC-Obr-076897	Oryza brachyantha	38.44	2.00e-165	576.00
IUUC-Ogl-077555	Oryza glaberrima	38.20	6.00e-154	538.00
IUUC-Ogu-078724	Oryza glumaepatula	38.02	1.00e-154	540.00
IUUC-Oin-080030	Oryza indica	38.31	6.00e-154	538.00
IUUC-Olo-080687	Oryza longistaminata	36.11	2.00e-141	496.00
IUUC-Ome-081867	Oryza meridionalis	38.41	1.00e-154	540.00
IUUC-Oni-082559	Oryza nivara	38.20	6.00e-153	534.00
IUUC-Opu-083332	Oryza punctata	39.51	4.00e-148	518.00
IUUC-Oru-084455	Oryza rufipogon	38.31	6.00e-154	538.00
IUUC-Osa-085793	Oryza sativa	38.31	6.00e-154	538.00
IUUC-Ola-087395	Oryzias latipes	69.29	0.00e+00	1160.00
IUUC-Olu-087768	Ostreococcus lucimarinus	38.56	7.00e-158	550.00
IUUC-Oga-088574	Otolemur garnettii	73.60	0.00e+00	1295.00
IUUC-Oar-089453	Ovis aries	72.44	0.00e+00	1311.00
IUUC-Ptr-090694	Pan troglodytes	73.71	0.00e+00	1283.00
IUUC-Pan-092420	Papio anubis	73.17	0.00e+00	1300.00
IUUC-Psi-093683	Pelodiscus sinensis	73.51	0.00e+00	1328.00
IUUC-Pma-094197	Petromyzon marinus	57.89	5.00e-73	266.00
IUUC-Pno-094783	Phaeosphaeria nodorum	35.22	2.00e-166	579.00
IUUC-Ppa-095208	Physcomitrella patens	39.41	8.00e-176	610.00
IUUC-Pfo-096299	Poecilia formosa	70.15	0.00e+00	1268.00
IUUC-Pab-098706	Pongo abelii	73.35	0.00e+00	1286.00
IUUC-Pop-099275	Populus trichocarpa	39.83	5.00e-175	608.00
IUUC-Pca-100796	Procavia capensis	60.16	0.00e+00	938.00
IUUC-Ppe-101861	Prunus persica	39.81	2.00e-178	619.00
IUUC-Pva-103241	Pteropus vampyrus	69.35	0.00e+00	1163.00
IUUC-Pgr-103432	Puccinia graminis	42.30	7.00e-126	445.00
IUUC-Ptt-103742	Puccinia triticina	39.63	1.00e-111	397.00
IUUC-Pte-104069	Pyrenophora teres	36.15	2.00e-162	566.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	36.15	5.00e-170	591.00
IUUC-Rno-105219	Rattus norvegicus	71.95	0.00e+00	1249.00
IUUC-Sce-106271	Saccharomyces cerevisiae	37.21	3.00e-161	562.00
IUUC-Sha-107550	Sarcophilus harrisii	73.87	0.00e+00	1313.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	36.70	3.00e-161	561.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.53	2.00e-171	596.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	36.81	3.00e-168	585.00
IUUC-Smo-108974	Selaginella moellendorffii	40.06	1.00e-172	600.00
IUUC-Sit-110000	Setaria italica	36.42	9.00e-156	544.00
IUUC-Sly-111595	Solanum lycopersicum	44.95	8.00e-125	441.00
IUUC-Stu-112516	Solanum tuberosum	45.52	1.00e-124	441.00
IUUC-Sar-113195	Sorex araneus	66.02	0.00e+00	1027.00
IUUC-Sbi-114465	Sorghum bicolor	37.61	1.00e-162	566.00
IUUC-Sre-115006	Sporisorium reilianum	35.26	1.00e-156	547.00
IUUC-Ssc-115929	Sus scrofa	71.37	0.00e+00	1271.00
IUUC-Tgu-117282	Taeniopygia guttata	73.60	0.00e+00	1256.00
IUUC-Tru-118406	Takifugu rubripes	66.74	0.00e+00	1181.00
IUUC-Tsy-119170	Tarsius syrichta	72.37	0.00e+00	1278.00
IUUC-Tni-119721	Tetraodon nigroviridis	67.39	0.00e+00	1157.00
IUUC-Tca-121761	Theobroma cacao	40.58	0.00e+00	627.00
IUUC-Tre-121908	Trichoderma reesei	35.96	1.00e-167	583.00
IUUC-Tvi-122547	Trichoderma virens	36.69	6.00e-168	584.00
IUUC-Tae-125496	Triticum aestivum	38.27	5.00e-157	548.00
IUUC-Tur-126811	Triticum urartu	38.95	2.00e-156	546.00
IUUC-Tme-126987	Tuber melanosporum	37.83	2.00e-176	612.00
IUUC-Tbe-127315	Tupaia belangeri	75.88	0.00e+00	695.00
IUUC-Ttr-129165	Tursiops truncatus	65.47	0.00e+00	634.00
IUUC-Uma-129651	Ustilago maydis	34.60	1.00e-155	544.00
IUUC-Vda-129973	Verticillium dahliae	37.32	1.00e-166	580.00
IUUC-Vpa-130163	Vicugna pacos	64.32	3.00e-154	539.00
IUUC-Vvi-131402	Vitis vinifera	43.46	2.00e-126	446.00
IUUC-Xma-133028	Xiphophorus maculatus	69.61	0.00e+00	1258.00
IUUC-Yli-134484	Yarrowia lipolytica	38.58	7.00e-157	547.00
IUUC-Zma-135938	Zea mays	37.27	3.00e-162	565.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence