iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-023000

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Flagellar associated protein

Genbank Nucleotide ID

DS496108

Gene Name

FAP187; CHLREDRAFT_189917

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_189917	EDP09337	EDP09337

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-38	128.9	455	489
UBD/Beta-Prp	6.70e-56	189.2	170	386

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           H++++++la+  ++ll+s+s D+t+++WDl+t ++
   Q: 455  HEGRISGLALlKGNLLASSSFDKTLRIWDLTTMKP 489
           99*******98669****************99765 PP

UBD/Beta-Prp

   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls.... 187
            +++s+ +  ++ k+++G+ d+ i +++ ++ ++ +e    + + h++++ +++++ ++n + +Gs D+ +++W+l  g+ll+++++ ++++v        
   Q: 170  TDIVSCMIITETGKIITGGYDKCICMYEFDKLEKPKEafqrIRKCHTAAIVSMAYDTFTNSILTGSIDGSMKVWSL-EGRLLDKFESINDQPVAVAYvpst 269
           467888888889****************9999988888999*********************************99.8*******9977777777665455 PP
   S: 188  ...fdsng..........................................kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs............ 231
              +                                                l+ +s+ +++++w++ +    rt++ h+d+v  v +             
   Q: 270  nmyW---AsgrfgrlvaydprapanvtqyvqessgldrfnveymyapmgtDMLLGASKQKQLIMWQYNHMGAYRTFRKHEDWVEGVIVVtpskeqpddede 367
           5551...055566666666677888888888889999999999999999889999999**********999***********9999887555555443332 PP
   S: 232  .pnderlvsgssDgsiriW 249
               + + s+++Dg +  W
   Q: 368  eAPPDEIFSCGADGKVLRW 386
           2222345555566666666 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MAMEVIKVVD EAHESPISSI AYNRVLKELY SSADGDKVWD AKTGTMVRMQ KGHKGAVTCL 60
AYSSTSKLLF SSSIDSTIGI WTDKGILLQM APSDVGPVHS LAWDSKHRYL AVGGNAVMLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTATGG AAGTGATTAA AGTGGTGGAC GAGGCGCACG AAAGTCCCAT CTCCAGCATA 60
GCTTACAACC GAGTGCTGAA GGAGCTCTAC TCCAGCGCAG ATGGCGACAA AGTTATCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0181--Complete proteome
KW-0282--Flagellum
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0031514--C:motile cilium

KEGG

cre:CHLREDRAFT_189917

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025220	Ciona intestinalis	31.25	7.00e-17	80.10
IUUC-Csv-026008	Ciona savignyi	31.19	3.00e-16	76.30
IUUC-Lch-050228	Latimeria chalumnae	35.78	3.00e-18	85.50
IUUC-Loc-051996	Lepisosteus oculatus	22.67	3.00e-19	88.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence