iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-054512

UUCD1 version

UUC-LoA-00478

Ensembl Protein ID

ENSLAFP00000011702.2

UniProt Accession

G3TCC5; G3TCC5_LOXAF

Protein Name

Uncharacterized protein

Gene Name

SNRNP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000013976.2	ENSLAFT00000013977.2	ENSLAFP00000011702.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-46	154.5	147	181
UBD/Beta-Prp	6.90e-80	268.7	60	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 147  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 181
           8*******9659955588999***********876 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 60   LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 147
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 148  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 234
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++r+Wd+r
   Q: 235  SVTGLSLSSEGSYLLSNAMDNTVRVWDVR 263
           ***************************98 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MIEQQKRKGP ELPLVPVKRQ RHDLLLGAAG SGPGAGQQQG ALLQAGPPRC SSLQAPIMLL 60
SGHEGEVYCC KFHPNGSTLA SAGFDRLILL WNVYGDCDNY ATLKGHSGAV MELHYNTDGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAGAAC AGCAGAAGCG AAAGGGCCCA GAGTTACCCC TGGTTCCAGT CAAGCGGCAG 60
CGGCATGACT TGCTGTTGGG AGCGGCGGGG TCGGGCCCCG GAGCTGGACA GCAGCAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding

KEGG

lav:100662588

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	58.04	1.00e-119	422.00
IUUC-Aml-001428	Ailuropoda melanoleuca	94.43	3.00e-180	624.00
IUUC-Atr-003164	Amborella trichopoda	58.99	9.00e-122	429.00
IUUC-Apl-003447	Anas platyrhynchos	97.21	3.00e-162	563.00
IUUC-Aca-004270	Anolis carolinensis	91.26	4.00e-169	587.00
IUUC-Aly-005659	Arabidopsis lyrata	62.46	4.00e-124	437.00
IUUC-Ath-006764	Arabidopsis thaliana	61.81	8.00e-124	436.00
IUUC-Acl-008324	Aspergillus clavatus	48.08	2.00e-96	345.00
IUUC-Afl-008607	Aspergillus flavus	49.66	1.00e-89	322.00
IUUC-Afu-008998	Aspergillus fumigatus	47.79	3.00e-96	344.00
IUUC-Ani-009363	Aspergillus nidulans	47.49	2.00e-97	348.00
IUUC-Ang-009513	Aspergillus niger	45.95	7.00e-87	313.00
IUUC-Aor-010237	Aspergillus oryzae	48.67	9.00e-98	350.00
IUUC-Ate-010374	Aspergillus terreus	44.71	3.00e-84	304.00
IUUC-Ame-010728	Astyanax mexicanus	83.47	2.00e-171	594.00
IUUC-Bgr-012297	Blumeria graminis	46.15	2.00e-70	258.00
IUUC-Bta-012433	Bos taurus	96.65	0.00e+00	648.00
IUUC-Bci-013763	Botrytis cinerea	50.79	3.00e-95	341.00
IUUC-Bdi-014490	Brachypodium distachyon	58.92	2.00e-119	421.00
IUUC-Bol-016479	Brassica oleracea	61.86	3.00e-124	437.00
IUUC-Bra-017219	Brassica rapa	62.14	3.00e-124	437.00
IUUC-Cel-018512	Caenorhabditis elegans	56.60	4.00e-113	400.00
IUUC-Cja-019308	Callithrix jacchus	96.09	0.00e+00	652.00
IUUC-Cfa-020998	Canis familiaris	97.21	0.00e+00	655.00
IUUC-Cpo-021580	Cavia porcellus	95.25	0.00e+00	649.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	54.78	9.00e-108	383.00
IUUC-Csa-023456	Chlorocebus sabaeus	94.40	0.00e+00	654.00
IUUC-Cho-024644	Choloepus hoffmanni	99.68	2.00e-179	621.00
IUUC-Cin-025463	Ciona intestinalis	59.36	2.00e-127	448.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	47.65	2.00e-94	338.00
IUUC-Cne-026780	Cryptococcus neoformans	41.46	1.00e-67	250.00
IUUC-Dre-027671	Danio rerio	82.07	1.00e-176	611.00
IUUC-Dno-029769	Dasypus novemcinctus	97.21	0.00e+00	658.00
IUUC-Dor-030776	Dipodomys ordii	92.70	2.00e-84	305.00
IUUC-Dse-031316	Dothistroma septosporum	43.20	4.00e-86	311.00
IUUC-Dme-031756	Drosophila melanogaster	58.58	4.00e-125	440.00
IUUC-Ete-032753	Echinops telfairi	93.24	1.00e-166	578.00
IUUC-Eca-033979	Equus caballus	96.37	0.00e+00	648.00
IUUC-Eeu-034862	Erinaceus europaeus	100.00	2.00e-72	265.00
IUUC-Fca-036110	Felis catus	96.75	2.00e-158	551.00
IUUC-Fal-037648	Ficedula albicollis	97.10	1.00e-176	612.00
IUUC-Fox-037861	Fusarium oxysporum	46.28	9.00e-92	330.00
IUUC-Fso-038405	Fusarium solani	46.28	2.00e-91	328.00
IUUC-Gmo-039383	Gadus morhua	83.19	3.00e-172	597.00
IUUC-Ggr-040082	Gaeumannomyces graminis	42.54	6.00e-84	303.00
IUUC-Gga-040785	Gallus gallus	92.22	0.00e+00	625.00
IUUC-Gac-041645	Gasterosteus aculeatus	83.47	8.00e-170	589.00
IUUC-Gma-044329	Glycine max	61.17	4.00e-122	431.00
IUUC-Ggo-044800	Gorilla gorilla	86.26	5.00e-158	550.00
IUUC-Hsa-045918	Homo sapiens	94.40	0.00e+00	654.00
IUUC-Hvu-047342	Hordeum vulgare	58.04	2.00e-119	421.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	95.43	3.00e-111	393.00
IUUC-Kpa-049149	Komagataella pastoris	34.30	1.00e-36	146.00
IUUC-Lch-050395	Latimeria chalumnae	87.08	0.00e+00	650.00
IUUC-Lpe-051275	Leersia perrieri	59.24	2.00e-120	425.00
IUUC-Loc-052666	Lepisosteus oculatus	86.07	7.00e-173	599.00
IUUC-Lma-053129	Leptosphaeria maculans	44.28	1.00e-88	319.00
IUUC-Mcc-055819	Macaca mulatta	94.40	0.00e+00	654.00
IUUC-Meu-056350	Macropus eugenii	83.38	1.00e-158	552.00
IUUC-Mor-057063	Magnaporthe oryzae	47.96	7.00e-92	330.00
IUUC-Mpo-057369	Magnaporthe poae	43.38	1.00e-84	306.00
IUUC-Mtr-058228	Medicago truncatula	60.19	9.00e-122	429.00
IUUC-Mla-059093	Melampsora laricipopulina	42.25	2.00e-69	256.00
IUUC-Mga-059719	Meleagris gallopavo	96.82	2.00e-178	617.00
IUUC-Mvi-060285	Microbotryum violaceum	40.00	1.00e-63	236.00
IUUC-Mmr-061685	Microcebus murinus	90.50	6.00e-170	589.00
IUUC-Mdo-062121	Monodelphis domestica	92.24	0.00e+00	634.00
IUUC-Mmu-063216	Mus musculus	96.65	0.00e+00	660.00
IUUC-Mac-065463	Musa acuminata	56.13	2.00e-109	388.00
IUUC-Mpu-066390	Mustela putorius furo	98.04	0.00e+00	664.00
IUUC-Mlu-066932	Myotis lucifugus	95.91	2.00e-179	621.00
IUUC-Nfi-068509	Neosartorya fischeri	47.79	5.00e-96	343.00
IUUC-Ncr-068870	Neurospora crassa	47.95	8.00e-93	333.00
IUUC-Nle-069539	Nomascus leucogenys	94.40	0.00e+00	654.00
IUUC-Opr-070555	Ochotona princeps	83.80	2.00e-166	577.00
IUUC-Ont-071490	Oreochromis niloticus	82.68	1.00e-169	588.00
IUUC-Oan-073044	Ornithorhynchus anatinus	79.06	3.00e-154	537.00
IUUC-Ocu-073764	Oryctolagus cuniculus	97.77	0.00e+00	666.00
IUUC-Oba-075704	Oryza barthii	59.24	3.00e-120	424.00
IUUC-Obr-076455	Oryza brachyantha	59.55	6.00e-120	424.00
IUUC-Ogl-077382	Oryza glaberrima	59.55	2.00e-120	425.00
IUUC-Ogu-078739	Oryza glumaepatula	59.24	3.00e-120	424.00
IUUC-Oin-079072	Oryza indica	59.24	3.00e-120	424.00
IUUC-Olo-080809	Oryza longistaminata	59.24	3.00e-120	424.00
IUUC-Ome-081677	Oryza meridionalis	59.24	7.00e-120	423.00
IUUC-Oni-082937	Oryza nivara	59.24	3.00e-120	424.00
IUUC-Opu-083510	Oryza punctata	59.24	3.00e-120	424.00
IUUC-Oru-084360	Oryza rufipogon	59.24	3.00e-120	424.00
IUUC-Osa-085640	Oryza sativa	59.24	3.00e-120	424.00
IUUC-Ola-086504	Oryzias latipes	82.91	1.00e-172	598.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.64	3.00e-63	235.00
IUUC-Oga-088773	Otolemur garnettii	96.65	0.00e+00	653.00
IUUC-Oar-089677	Ovis aries	95.84	0.00e+00	643.00
IUUC-Ptr-090724	Pan troglodytes	94.15	2.00e-180	624.00
IUUC-Pan-092683	Papio anubis	94.40	0.00e+00	654.00
IUUC-Psi-093415	Pelodiscus sinensis	98.05	4.00e-176	610.00
IUUC-Pma-094562	Petromyzon marinus	76.40	4.00e-167	580.00
IUUC-Pno-095014	Phaeosphaeria nodorum	48.84	3.00e-89	322.00
IUUC-Ppa-095822	Physcomitrella patens	58.36	1.00e-121	429.00
IUUC-Pfo-096579	Poecilia formosa	82.82	1.00e-168	585.00
IUUC-Pab-098313	Pongo abelii	94.40	0.00e+00	654.00
IUUC-Pop-099747	Populus trichocarpa	61.49	3.00e-123	434.00
IUUC-Pca-100871	Procavia capensis	85.36	4.00e-130	457.00
IUUC-Ppe-101389	Prunus persica	62.14	4.00e-124	437.00
IUUC-Pva-102468	Pteropus vampyrus	82.40	8.00e-149	519.00
IUUC-Pgr-103523	Puccinia graminis	41.64	4.00e-73	268.00
IUUC-Ptt-103930	Puccinia triticina	41.69	1.00e-72	266.00
IUUC-Pte-104299	Pyrenophora teres	46.33	4.00e-94	337.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	46.92	4.00e-94	338.00
IUUC-Rno-105796	Rattus norvegicus	96.65	0.00e+00	652.00
IUUC-Sha-107191	Sarcophilus harrisii	91.97	0.00e+00	634.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	38.78	8.00e-64	237.00
IUUC-Spo-108249	Schizosaccharomyces pombe	43.67	2.00e-80	292.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	49.69	1.00e-94	339.00
IUUC-Sit-110805	Setaria italica	58.28	3.00e-119	421.00
IUUC-Sly-111567	Solanum lycopersicum	62.46	5.00e-125	440.00
IUUC-Stu-112562	Solanum tuberosum	62.46	8.00e-126	442.00
IUUC-Sar-112991	Sorex araneus	98.63	2.00e-120	424.00
IUUC-Sbi-114010	Sorghum bicolor	58.39	7.00e-119	419.00
IUUC-Sre-114947	Sporisorium reilianum	42.99	4.00e-74	271.00
IUUC-Ssc-115371	Sus scrofa	96.65	0.00e+00	648.00
IUUC-Tgu-117429	Taeniopygia guttata	90.83	9.00e-175	605.00
IUUC-Tru-118081	Takifugu rubripes	83.06	5.00e-171	593.00
IUUC-Tsy-119101	Tarsius syrichta	84.64	3.00e-158	550.00
IUUC-Tni-120532	Tetraodon nigroviridis	83.47	1.00e-169	588.00
IUUC-Tca-121373	Theobroma cacao	62.14	8.00e-125	439.00
IUUC-Tre-122050	Trichoderma reesei	45.63	2.00e-90	325.00
IUUC-Tvi-122394	Trichoderma virens	44.82	9.00e-85	306.00
IUUC-Tae-124661	Triticum aestivum	58.18	7.00e-119	419.00
IUUC-Tme-126998	Tuber melanosporum	51.46	3.00e-94	338.00
IUUC-Tbe-128032	Tupaia belangeri	96.37	0.00e+00	654.00
IUUC-Ttr-129102	Tursiops truncatus	86.03	2.00e-158	551.00
IUUC-Uma-129363	Ustilago maydis	40.85	1.00e-77	283.00
IUUC-Vda-129891	Verticillium dahliae	49.06	2.00e-93	335.00
IUUC-Vpa-130827	Vicugna pacos	95.81	0.00e+00	645.00
IUUC-Vvi-131202	Vitis vinifera	60.84	5.00e-123	433.00
IUUC-Xtr-132769	Xenopus tropicalis	83.84	9.00e-169	585.00
IUUC-Xma-133147	Xiphophorus maculatus	82.82	4.00e-168	583.00
IUUC-Yli-134352	Yarrowia lipolytica	34.11	2.00e-36	145.00
IUUC-Zma-135294	Zea mays	58.39	1.00e-118	419.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence