iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116383

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU469118

Gene Name

USP50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000004638.2	ENSSSCT00000005123.2	ENSSSCP00000004998.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.40e-87	293.6	47	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           tGl+NlgNtCYmN++LQcL +i++l e++l+ k+  +l     +++  e++++++ +++ +w ++++ vsp+ + +al+++ + + +  
   Q: 47   TGLRNLGNTCYMNAILQCLCSISPLVEYFLSgKYITAL-----QKDCSEVATAFAYVMTDMWLGDSECVSPEIFRSALGNLYPALMKKT 130
           7******************************4333333.....45678***************************************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvp 177
           qqDaqEfl ++l++l+e+l     k++++ ++ ++++ ++   +k   +++s+i++lF+gql+ +i+cl+c+n + ++e f+ l+lp+p
   Q: 131  QQDAQEFLIYVLNELHEAL-----KKYHRRRSYENRSIPR-CCRKMIASESSIITRLFEGQLSYSIICLKCENCTYKNEVFTVLPLPIP 213
           *******************.....4466666666555555.5689999***************************************** PP
   S: 178  gkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfc 265
           ++ e+   slqdcL+ f+++++l+ +n+++c+ c+ kqe+  + +++k P+++++hLkRf  +  + +++k+ + +++pl+ Ldl+p+ 
   Q: 214  SEYEC---SLQDCLQCFFQQDTLTWNNQIHCSFCETKQETAVRASISKAPKIIVFHLKRF--DILGTMKRKLRTDIHYPLTnLDLTPYI 297
           *****...****************************************************..55668999******************* PP
   S: 266  tspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYk 336
           +   +k   + kY+L+avv+H G l++GHY+a++kn+  + W+ fdD++V+e++ ++v++   +taY+lfY 
   Q: 298  CPIFRK---HPKYNLCAVVNHFGDLDGGHYTAFCKNSVTQaWYSFDDTRVSEIPDTSVQT---ATAYLLFYS 363
           **7765...79*************************98888*******************...********6 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

FTKMASQLPF PADDFGIYYV LSECTDHYDP FPVNEADENQ PHFQGVTGLR NLGNTCYMNA 60
ILQCLCSISP LVEYFLSGKY ITALQKDCSE VATAFAYVMT DMWLGDSECV SPEIFRSALG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCAAAGTA AAAGGCTCGG AGAAATGAAG TTAAAAGGAA TAGAAGTAGC TCCTGAATAG 60
AAGTGAAAGA CCAAAGTGGT TTCACTAAAA TGGCTTCACA GCTGCCTTTT CCTGCAGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002089	Ailuropoda melanoleuca	91.22	0.00e+00	725.00
IUUC-Aca-005256	Anolis carolinensis	50.38	7.00e-105	373.00
IUUC-Bta-012753	Bos taurus	88.30	0.00e+00	692.00
IUUC-Cfa-020054	Canis familiaris	87.72	2.00e-177	614.00
IUUC-Cpo-021375	Cavia porcellus	77.90	1.00e-167	582.00
IUUC-Csa-023902	Chlorocebus sabaeus	83.64	2.00e-107	381.00
IUUC-Cho-024755	Choloepus hoffmanni	76.04	4.00e-150	523.00
IUUC-Dor-030311	Dipodomys ordii	88.65	3.00e-96	344.00
IUUC-Ete-032570	Echinops telfairi	64.04	3.00e-105	374.00
IUUC-Eca-034343	Equus caballus	90.69	0.00e+00	717.00
IUUC-Eeu-034510	Erinaceus europaeus	90.28	7.00e-175	605.00
IUUC-Fca-035920	Felis catus	90.62	0.00e+00	711.00
IUUC-Fal-036903	Ficedula albicollis	57.89	2.00e-105	375.00
IUUC-Gac-042261	Gasterosteus aculeatus	43.32	2.00e-72	265.00
IUUC-Hsa-046665	Homo sapiens	82.22	2.00e-166	577.00
IUUC-Itr-048167	Ictidomys tridecemlineatus	91.44	0.00e+00	727.00
IUUC-Lch-049925	Latimeria chalumnae	53.57	6.00e-106	376.00
IUUC-Loc-051880	Lepisosteus oculatus	48.70	5.00e-80	292.00
IUUC-Laf-054494	Loxodonta africana	90.49	0.00e+00	704.00
IUUC-Mcc-055507	Macaca mulatta	88.00	0.00e+00	646.00
IUUC-Meu-055906	Macropus eugenii	75.08	4.00e-152	530.00
IUUC-Mmr-061564	Microcebus murinus	65.09	9.00e-114	402.00
IUUC-Mdo-061800	Monodelphis domestica	77.96	1.00e-177	615.00
IUUC-Mmu-063618	Mus musculus	83.51	0.00e+00	652.00
IUUC-Mpu-066699	Mustela putorius furo	91.76	0.00e+00	727.00
IUUC-Mlu-067672	Myotis lucifugus	88.77	0.00e+00	704.00
IUUC-Opr-070949	Ochotona princeps	84.42	3.00e-157	546.00
IUUC-Oan-073725	Ornithorhynchus anatinus	65.33	6.00e-143	499.00
IUUC-Ocu-074021	Oryctolagus cuniculus	91.40	0.00e+00	723.00
IUUC-Oga-088258	Otolemur garnettii	91.14	1.00e-175	608.00
IUUC-Oar-089881	Ovis aries	90.69	0.00e+00	720.00
IUUC-Ptr-090988	Pan troglodytes	82.69	4.00e-162	563.00
IUUC-Pan-091773	Papio anubis	88.17	0.00e+00	683.00
IUUC-Psi-093243	Pelodiscus sinensis	72.96	8.00e-141	492.00
IUUC-Pab-097713	Pongo abelii	84.14	1.00e-178	618.00
IUUC-Pca-100226	Procavia capensis	69.82	2.00e-136	478.00
IUUC-Pva-103172	Pteropus vampyrus	91.12	0.00e+00	651.00
IUUC-Rno-105950	Rattus norvegicus	85.79	0.00e+00	665.00
IUUC-Sha-107026	Sarcophilus harrisii	78.69	1.00e-171	595.00
IUUC-Tgu-116511	Taeniopygia guttata	55.49	2.00e-99	355.00
IUUC-Tbe-127808	Tupaia belangeri	83.94	5.00e-64	237.00
IUUC-Ttr-129046	Tursiops truncatus	90.83	0.00e+00	636.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence