iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099956

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

BRCT domain-containing family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_550126; POPTR_0001s36840g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s36840	POPTR_0001s36840.1	POPTR_0001s36840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.00e-06	27.6	42	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ +++  ++l C+Hvf+ +C+ + +      +s+++ CP+C+
   Q: 42   CPICLSLLDT-AVSLTCNHVFCNSCIvKSM------KSGSD-CPVCK 80
           ********99.999***********93333......77777.****6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIRSAVSESS SHYQISIQRE RRASCKMGDP THLEKMGREL KCPICLSLLD TAVSLTCNHV 60
FCNSCIVKSM KSGSDCPVCK VPYRRREVRA APHMDNLVSI YKSMEIASGF NIFVTQNPPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAAGGA GCGCCGTCAG TGAGTCTTCT TCTCATTATC AAATTTCAAT CCAGAGAGAA 60
AGGCGAGCGA GTTGCAAAAT GGGAGATCCA ACTCACCTCG AGAAAATGGG CAGAGAGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR031099--BRCA1-associated
IPR001357--BRCT_dom
IPR034732--EPHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50172--BRCT
PS51805--EPHD
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00533--BRCT

SMART

SM00292--BRCT
SM00184--RING

Gene Ontology

GO:0070531--C:BRCA1-A complex
GO:0031436--C:BRCA1-BARD1 complex
GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0045717--P:negative regulation of fatty acid biosynthetic process
GO:0035067--P:negative regulation of histone acetylation
GO:0071158--P:positive regulation of cell cycle arrest
GO:0035066--P:positive regulation of histone acetylation
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0042127--P:regulation of cell proliferation

KEGG

pop:POPTR_0001s36840g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000225	Aegilops tauschii	52.75	6.00e-122	431.00
IUUC-Aml-002346	Ailuropoda melanoleuca	37.16	6.00e-22	99.00
IUUC-Atr-002625	Amborella trichopoda	42.79	2.00e-130	459.00
IUUC-Apl-004108	Anas platyrhynchos	31.91	4.00e-17	82.80
IUUC-Aca-005387	Anolis carolinensis	34.67	1.00e-19	91.30
IUUC-Ath-006986	Arabidopsis thaliana	54.64	3.00e-123	435.00
IUUC-Ame-011720	Astyanax mexicanus	24.12	5.00e-16	80.10
IUUC-Bgr-012178	Blumeria graminis	24.74	2.00e-06	46.20
IUUC-Bta-013417	Bos taurus	37.84	5.00e-22	99.40
IUUC-Bdi-014760	Brachypodium distachyon	53.30	6.00e-127	447.00
IUUC-Bol-016476	Brassica oleracea	54.62	6.00e-118	418.00
IUUC-Bra-017176	Brassica rapa	54.87	1.00e-119	423.00
IUUC-Cja-019415	Callithrix jacchus	37.16	9.00e-22	98.60
IUUC-Cfa-020351	Canis familiaris	37.16	7.00e-22	98.60
IUUC-Cpo-021746	Cavia porcellus	37.84	4.00e-22	99.40
IUUC-Cre-022955	Chlamydomonas reinhardtii	29.20	6.00e-11	63.20
IUUC-Csa-023450	Chlorocebus sabaeus	37.16	1.00e-21	97.80
IUUC-Cho-024530	Choloepus hoffmanni	33.93	5.00e-12	67.40
IUUC-Csv-025987	Ciona savignyi	32.00	5.00e-13	68.60
IUUC-Dre-028366	Danio rerio	28.28	3.00e-09	56.20
IUUC-Dno-029038	Dasypus novemcinctus	38.51	3.00e-22	99.80
IUUC-Dor-030826	Dipodomys ordii	38.14	1.00e-16	81.30
IUUC-Ete-033061	Echinops telfairi	36.49	2.00e-21	97.40
IUUC-Eca-033446	Equus caballus	26.11	1.00e-14	75.90
IUUC-Eeu-034858	Erinaceus europaeus	38.20	1.00e-11	65.90
IUUC-Fca-035414	Felis catus	37.84	5.00e-22	99.40
IUUC-Fal-037357	Ficedula albicollis	30.07	5.00e-18	85.90
IUUC-Gmo-038782	Gadus morhua	31.06	6.00e-15	76.30
IUUC-Gga-040255	Gallus gallus	36.72	3.00e-18	86.70
IUUC-Gac-042296	Gasterosteus aculeatus	28.95	1.00e-20	95.90
IUUC-Gma-044372	Glycine max	63.62	1.00e-155	544.00
IUUC-Ggo-045300	Gorilla gorilla	37.84	1.00e-22	101.00
IUUC-Hsa-045826	Homo sapiens	37.84	3.00e-22	99.80
IUUC-Itr-048456	Ictidomys tridecemlineatus	36.49	6.00e-20	92.40
IUUC-Lch-050674	Latimeria chalumnae	34.45	2.00e-16	80.50
IUUC-Lpe-050895	Leersia perrieri	52.30	1.00e-127	450.00
IUUC-Loc-051952	Lepisosteus oculatus	26.34	5.00e-18	86.70
IUUC-Laf-054591	Loxodonta africana	37.16	6.00e-22	99.00
IUUC-Mcc-055017	Macaca mulatta	37.16	1.00e-21	97.80
IUUC-Mor-057034	Magnaporthe oryzae	45.00	9.00e-07	47.80
IUUC-Mtr-058400	Medicago truncatula	45.28	0.00e+00	803.00
IUUC-Mga-059484	Meleagris gallopavo	36.72	2.00e-18	87.00
IUUC-Mmr-061544	Microcebus murinus	37.84	5.00e-22	99.40
IUUC-Mdo-062408	Monodelphis domestica	35.33	1.00e-18	88.20
IUUC-Mmu-064203	Mus musculus	33.11	2.00e-19	90.50
IUUC-Mac-065131	Musa acuminata	40.50	0.00e+00	666.00
IUUC-Mpu-066899	Mustela putorius furo	37.16	1.00e-21	97.80
IUUC-Mlu-067781	Myotis lucifugus	39.86	7.00e-24	105.00
IUUC-Nle-069031	Nomascus leucogenys	37.16	1.00e-21	98.20
IUUC-Opr-071057	Ochotona princeps	40.24	1.00e-12	67.00
IUUC-Ont-072380	Oreochromis niloticus	27.19	8.00e-18	86.30
IUUC-Oan-073243	Ornithorhynchus anatinus	39.08	1.00e-11	61.60
IUUC-Ocu-074785	Oryctolagus cuniculus	35.81	1.00e-21	97.80
IUUC-Oba-075676	Oryza barthii	51.59	1.00e-110	393.00
IUUC-Obr-076308	Oryza brachyantha	54.91	1.00e-123	437.00
IUUC-Ogl-077654	Oryza glaberrima	51.59	1.00e-110	393.00
IUUC-Ogu-078659	Oryza glumaepatula	53.32	1.00e-110	394.00
IUUC-Oin-079086	Oryza indica	53.32	1.00e-110	394.00
IUUC-Olo-080264	Oryza longistaminata	55.73	4.00e-104	372.00
IUUC-Ome-081445	Oryza meridionalis	53.81	8.00e-115	407.00
IUUC-Oni-082502	Oryza nivara	53.32	1.00e-110	394.00
IUUC-Opu-083700	Oryza punctata	39.06	0.00e+00	640.00
IUUC-Oru-085093	Oryza rufipogon	53.32	1.00e-110	394.00
IUUC-Osa-086087	Oryza sativa	53.32	1.00e-110	394.00
IUUC-Ola-086863	Oryzias latipes	27.03	1.00e-17	85.50
IUUC-Oga-088383	Otolemur garnettii	38.98	1.00e-17	84.70
IUUC-Oar-089357	Ovis aries	37.84	6.00e-22	99.00
IUUC-Ptr-090959	Pan troglodytes	37.84	2.00e-22	100.00
IUUC-Pan-092160	Papio anubis	37.16	1.00e-21	98.20
IUUC-Psi-093036	Pelodiscus sinensis	32.43	2.00e-17	83.60
IUUC-Pfo-096328	Poecilia formosa	26.99	2.00e-18	88.20
IUUC-Pab-098198	Pongo abelii	37.84	4.00e-22	99.40
IUUC-Pca-100698	Procavia capensis	28.44	6.00e-17	83.60
IUUC-Ppe-101676	Prunus persica	51.36	0.00e+00	920.00
IUUC-Pva-102243	Pteropus vampyrus	37.84	2.00e-19	90.90
IUUC-Rno-104832	Rattus norvegicus	36.72	1.00e-17	84.30
IUUC-Sit-110609	Setaria italica	54.22	8.00e-127	447.00
IUUC-Sly-111863	Solanum lycopersicum	55.42	2.00e-136	479.00
IUUC-Stu-112154	Solanum tuberosum	44.90	0.00e+00	738.00
IUUC-Sar-112984	Sorex araneus	31.65	2.00e-10	59.30
IUUC-Sbi-114470	Sorghum bicolor	51.90	2.00e-127	449.00
IUUC-Ssc-115611	Sus scrofa	39.19	1.00e-23	104.00
IUUC-Tgu-116812	Taeniopygia guttata	29.73	2.00e-17	84.30
IUUC-Tru-117895	Takifugu rubripes	27.56	7.00e-19	89.70
IUUC-Tsy-119446	Tarsius syrichta	37.12	7.00e-18	85.50
IUUC-Tni-120842	Tetraodon nigroviridis	29.33	2.00e-14	73.90
IUUC-Tca-121417	Theobroma cacao	51.90	0.00e+00	979.00
IUUC-Tae-124838	Triticum aestivum	51.50	5.00e-127	448.00
IUUC-Tur-126725	Triticum urartu	51.50	2.00e-127	449.00
IUUC-Tbe-127550	Tupaia belangeri	37.84	4.00e-21	96.30
IUUC-Ttr-128364	Tursiops truncatus	41.74	5.00e-16	79.30
IUUC-Vda-129938	Verticillium dahliae	34.29	2.00e-07	50.10
IUUC-Vpa-130659	Vicugna pacos	37.16	6.00e-22	99.00
IUUC-Vvi-131586	Vitis vinifera	50.70	0.00e+00	894.00
IUUC-Xtr-131846	Xenopus tropicalis	33.33	6.00e-18	85.90
IUUC-Xma-133651	Xiphophorus maculatus	31.08	9.00e-12	65.90
IUUC-Zma-135107	Zea mays	44.07	3.00e-102	365.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence