iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076168

Ensembl Protein ID

OB11G26490.1

UniProt Accession

J3NA13; J3NA13_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB11G26490	OB11G26490.1	OB11G26490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-26	91.5	212	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtl.lvsGsdDgtikvWDlrtg 33
           gH+++v +++  +d++ +++Gs D t+++WD+ t 
   Q: 212  GHASWVLSIDVsPDGMaVATGSSDRTVRLWDINTR 246
           8***********99553899***********8765 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MFCCILLVHS VLFVVLSLYT DGNLYNIWNT STACQTVMDI FSYHILKKTV HGLACFTSSL 60
TLSFWVVFTQ SVTDIISSTK CFPSQGNALA AAGGGSGSVK LWDTEKWKPI TSLSVPRPEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTTGCT GCATACTGCT TGTACATTCA GTACTTTTTG TTGTGCTGTC ACTATATACA 60
GATGGTAATT TGTATAATAT TTGGAATACC AGTACAGCGT GTCAAACTGT AATGGACATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016593--C:Cdc73/Paf1 complex
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0010452--P:histone H3-K36 methylation
GO:0051568--P:histone H3-K4 methylation
GO:0009910--P:negative regulation of flower development
GO:0016441--P:posttranscriptional gene silencing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	92.67	1.00e-104	371.00
IUUC-Aml-002245	Ailuropoda melanoleuca	47.20	4.00e-33	134.00
IUUC-Atr-003142	Amborella trichopoda	68.34	2.00e-80	290.00
IUUC-Apl-003179	Anas platyrhynchos	47.20	1.00e-35	142.00
IUUC-Aca-004880	Anolis carolinensis	47.20	2.00e-39	155.00
IUUC-Aly-005956	Arabidopsis lyrata	63.35	2.00e-85	307.00
IUUC-Ath-007230	Arabidopsis thaliana	71.23	2.00e-85	308.00
IUUC-Ame-011511	Astyanax mexicanus	47.24	5.00e-35	140.00
IUUC-Bta-012936	Bos taurus	47.20	3.00e-33	134.00
IUUC-Bci-013896	Botrytis cinerea	46.15	3.00e-28	120.00
IUUC-Bdi-015020	Brachypodium distachyon	93.72	3.00e-106	377.00
IUUC-Bol-016345	Brassica oleracea	64.54	2.00e-86	311.00
IUUC-Bra-017323	Brassica rapa	64.54	1.00e-86	311.00
IUUC-Cja-019961	Callithrix jacchus	47.20	3.00e-33	134.00
IUUC-Cfa-020862	Canis familiaris	47.20	4.00e-33	134.00
IUUC-Cpo-021356	Cavia porcellus	47.20	3.00e-33	134.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	49.42	3.00e-34	137.00
IUUC-Csa-024067	Chlorocebus sabaeus	47.20	5.00e-33	134.00
IUUC-Cho-024421	Choloepus hoffmanni	43.80	6.00e-19	86.30
IUUC-Cin-025261	Ciona intestinalis	44.72	5.00e-37	147.00
IUUC-Cne-026846	Cryptococcus neoformans	37.36	7.00e-23	100.00
IUUC-Dno-029084	Dasypus novemcinctus	47.20	3.00e-33	134.00
IUUC-Dor-030353	Dipodomys ordii	40.31	5.00e-23	100.00
IUUC-Dme-031836	Drosophila melanogaster	40.56	1.00e-36	145.00
IUUC-Ete-032261	Echinops telfairi	45.96	1.00e-32	132.00
IUUC-Eca-034231	Equus caballus	42.86	5.00e-25	107.00
IUUC-Eeu-034828	Erinaceus europaeus	46.58	8.00e-31	126.00
IUUC-Fca-036569	Felis catus	47.20	3.00e-33	134.00
IUUC-Fal-037469	Ficedula albicollis	46.58	5.00e-35	140.00
IUUC-Gmo-039579	Gadus morhua	48.45	3.00e-36	144.00
IUUC-Gga-040808	Gallus gallus	46.58	9.00e-35	139.00
IUUC-Gac-042100	Gasterosteus aculeatus	47.20	3.00e-35	140.00
IUUC-Gma-044408	Glycine max	66.01	7.00e-88	316.00
IUUC-Ggo-045227	Gorilla gorilla	47.20	3.00e-33	134.00
IUUC-Hsa-045839	Homo sapiens	47.20	3.00e-33	134.00
IUUC-Hvu-047591	Hordeum vulgare	91.24	5.00e-105	372.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	47.20	3.00e-33	134.00
IUUC-Lch-049549	Latimeria chalumnae	40.99	1.00e-29	122.00
IUUC-Lpe-050746	Leersia perrieri	97.42	6.00e-111	392.00
IUUC-Loc-052540	Lepisosteus oculatus	46.58	3.00e-31	127.00
IUUC-Laf-053907	Loxodonta africana	47.20	3.00e-33	134.00
IUUC-Mcc-055828	Macaca mulatta	47.20	3.00e-33	134.00
IUUC-Meu-056075	Macropus eugenii	47.20	6.00e-36	143.00
IUUC-Mor-056971	Magnaporthe oryzae	33.53	6.00e-17	80.50
IUUC-Mtr-057728	Medicago truncatula	63.64	1.00e-79	288.00
IUUC-Mga-059872	Meleagris gallopavo	46.58	4.00e-35	140.00
IUUC-Mmr-060985	Microcebus murinus	47.20	4.00e-33	134.00
IUUC-Mdo-062758	Monodelphis domestica	48.45	1.00e-35	142.00
IUUC-Mmu-063580	Mus musculus	46.58	6.00e-33	133.00
IUUC-Mac-064880	Musa acuminata	77.25	2.00e-92	331.00
IUUC-Mpu-066577	Mustela putorius furo	47.20	4.00e-33	134.00
IUUC-Nle-069573	Nomascus leucogenys	47.20	3.00e-33	134.00
IUUC-Opr-070216	Ochotona princeps	47.83	3.00e-33	134.00
IUUC-Ont-071981	Oreochromis niloticus	47.20	9.00e-36	142.00
IUUC-Oan-073223	Ornithorhynchus anatinus	54.17	3.00e-26	110.00
IUUC-Ocu-074199	Oryctolagus cuniculus	41.89	3.00e-23	101.00
IUUC-Oba-075255	Oryza barthii	97.94	1.00e-111	394.00
IUUC-Ogl-077777	Oryza glaberrima	97.94	3.00e-111	394.00
IUUC-Ogu-078780	Oryza glumaepatula	97.94	3.00e-111	394.00
IUUC-Oin-079228	Oryza indica	97.94	2.00e-111	394.00
IUUC-Olo-080617	Oryza longistaminata	98.61	1.00e-81	293.00
IUUC-Ome-081421	Oryza meridionalis	97.94	1.00e-111	394.00
IUUC-Oni-082997	Oryza nivara	97.94	2.00e-111	394.00
IUUC-Opu-083931	Oryza punctata	96.68	2.00e-112	397.00
IUUC-Oru-084645	Oryza rufipogon	97.94	3.00e-111	394.00
IUUC-Osa-085842	Oryza sativa	97.94	2.00e-111	394.00
IUUC-Ola-086696	Oryzias latipes	45.96	3.00e-32	130.00
IUUC-Olu-087643	Ostreococcus lucimarinus	46.91	3.00e-43	167.00
IUUC-Oga-088272	Otolemur garnettii	47.20	3.00e-33	134.00
IUUC-Oar-089416	Ovis aries	47.20	3.00e-33	134.00
IUUC-Ptr-090944	Pan troglodytes	47.20	3.00e-33	134.00
IUUC-Pan-091861	Papio anubis	47.20	3.00e-33	134.00
IUUC-Psi-093750	Pelodiscus sinensis	46.58	1.00e-34	139.00
IUUC-Pma-094608	Petromyzon marinus	44.58	2.00e-32	131.00
IUUC-Ppa-095737	Physcomitrella patens	63.26	5.00e-72	263.00
IUUC-Pfo-096479	Poecilia formosa	47.83	1.00e-35	142.00
IUUC-Pab-098179	Pongo abelii	47.20	3.00e-33	134.00
IUUC-Pop-099532	Populus trichocarpa	70.65	1.00e-71	261.00
IUUC-Ppe-102056	Prunus persica	65.83	2.00e-82	297.00
IUUC-Pva-102859	Pteropus vampyrus	46.58	5.00e-32	130.00
IUUC-Rno-105826	Rattus norvegicus	46.58	6.00e-33	133.00
IUUC-Sha-106660	Sarcophilus harrisii	47.20	7.00e-36	143.00
IUUC-Spo-108244	Schizosaccharomyces pombe	30.94	1.00e-17	82.80
IUUC-Smo-109234	Selaginella moellendorffii	60.19	3.00e-64	237.00
IUUC-Sit-110048	Setaria italica	91.94	8.00e-100	355.00
IUUC-Sly-111249	Solanum lycopersicum	57.44	2.00e-72	265.00
IUUC-Stu-112659	Solanum tuberosum	58.68	3.00e-72	264.00
IUUC-Sbi-114309	Sorghum bicolor	91.47	1.00e-99	355.00
IUUC-Ssc-115560	Sus scrofa	47.20	3.00e-33	134.00
IUUC-Tgu-117300	Taeniopygia guttata	46.58	4.00e-35	140.00
IUUC-Tru-117933	Takifugu rubripes	46.58	2.00e-35	141.00
IUUC-Tsy-119574	Tarsius syrichta	35.40	1.00e-16	79.70
IUUC-Tni-120191	Tetraodon nigroviridis	46.58	2.00e-35	141.00
IUUC-Tca-120983	Theobroma cacao	70.00	1.00e-74	272.00
IUUC-Tae-124056	Triticum aestivum	92.67	1.00e-104	371.00
IUUC-Tur-126711	Triticum urartu	90.62	6.00e-101	359.00
IUUC-Tbe-127802	Tupaia belangeri	47.20	3.00e-33	134.00
IUUC-Vpa-130618	Vicugna pacos	54.17	4.00e-26	110.00
IUUC-Vvi-130981	Vitis vinifera	66.14	4.00e-78	283.00
IUUC-Xtr-132460	Xenopus tropicalis	45.96	5.00e-32	130.00
IUUC-Xma-134154	Xiphophorus maculatus	47.83	1.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence