iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129713

Ensembl Protein ID

EGY15678

UniProt Accession

G2X9L0; G2X9L0_VERDV

Genbank Protein ID

EGY15678.1

Protein Name

RNA polymerase II transcription factor B subunit 3

Genbank Nucleotide ID

DS572708

Gene Name

VDAG_06842

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_06842	EGY15678	EGY15678

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	43.64	4.00e-17	86.70	IUUC-Hsa-045876
E3 activity/RING/RING	32.74	5.00e-35	143.00	IUUC-Sce-106405

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MASRKGNPPS PSTDVCPVCK TMRYLNRDLE FLINPECYHP MCANCVARLF ADGPAQCPYA 60
GCTKTLRKKA FKAAWFGDLT VEREVDVRRR VHAVFNKEEP DFESLEDYNA YLEQVESLTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCGC GAAAGGGCAA CCCCCCCTCT CCAAGCACCG ACGTGTGTCC TGTCTGCAAG 60
ACAATGCGAT ACCTCAACCG CGATCTCGAG TTTCTGATCA ACCCCGAATG CTACCATCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015877--Cdk-activating_kinase_MAT1_cen
IPR004575--MAT1/Tfb3
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF06391--MAT1
PF17121--zf-C3HC4_5

Gene Ontology

GO:0005634--C:nucleus
GO:0061575--F:cyclin-dependent protein serine/threonine kinase activator activity
GO:0008270--F:zinc ion binding
GO:0007049--P:cell cycle

KEGG

vda:VDAG_06842

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000744	Aegilops tauschii	39.22	7.00e-04	38.50
IUUC-Aml-002414	Ailuropoda melanoleuca	43.64	5.00e-24	103.00
IUUC-Atr-002627	Amborella trichopoda	46.94	3.00e-10	56.20
IUUC-Apl-003312	Anas platyrhynchos	40.48	6.00e-16	75.90
IUUC-Aca-004731	Anolis carolinensis	27.12	2.00e-23	101.00
IUUC-Aly-006244	Arabidopsis lyrata	53.49	5.00e-11	58.50
IUUC-Ath-007136	Arabidopsis thaliana	51.16	1.00e-10	57.40
IUUC-Ago-007788	Ashbya gossypii	35.56	1.00e-47	181.00
IUUC-Acl-008179	Aspergillus clavatus	38.76	2.00e-55	207.00
IUUC-Afl-008465	Aspergillus flavus	38.29	2.00e-57	214.00
IUUC-Afu-009056	Aspergillus fumigatus	37.60	3.00e-54	203.00
IUUC-Ani-009235	Aspergillus nidulans	32.16	6.00e-20	89.40
IUUC-Ang-009677	Aspergillus niger	38.11	2.00e-55	207.00
IUUC-Aor-010017	Aspergillus oryzae	38.40	3.00e-57	213.00
IUUC-Ate-010259	Aspergillus terreus	37.64	1.00e-52	198.00
IUUC-Ame-010934	Astyanax mexicanus	34.55	2.00e-17	81.30
IUUC-Bgr-012074	Blumeria graminis	44.69	4.00e-68	249.00
IUUC-Bta-013329	Bos taurus	43.64	3.00e-24	103.00
IUUC-Bci-013704	Botrytis cinerea	49.17	3.00e-78	283.00
IUUC-Bdi-014672	Brachypodium distachyon	37.65	2.00e-09	53.50
IUUC-Bra-017894	Brassica rapa	55.81	6.00e-12	61.60
IUUC-Cel-018428	Caenorhabditis elegans	33.09	3.00e-21	94.00
IUUC-Cja-019720	Callithrix jacchus	43.64	3.00e-24	103.00
IUUC-Cfa-020319	Canis familiaris	43.64	5.00e-24	103.00
IUUC-Cpo-021652	Cavia porcellus	36.50	1.00e-23	102.00
IUUC-Cre-022749	Chlamydomonas reinhardtii	33.78	1.00e-08	50.80
IUUC-Csa-023560	Chlorocebus sabaeus	43.64	3.00e-24	103.00
IUUC-Cin-025502	Ciona intestinalis	29.25	5.00e-28	116.00
IUUC-Csv-026302	Ciona savignyi	28.08	3.00e-25	107.00
IUUC-Cgl-026541	Colletotrichum gloeosporioides	52.32	9.00e-34	134.00
IUUC-Cne-027055	Cryptococcus neoformans	45.83	2.00e-31	128.00
IUUC-Cme-027128	Cyanidioschyzon merolae	51.61	5.00e-04	36.20
IUUC-Dre-027714	Danio rerio	42.73	8.00e-24	102.00
IUUC-Dno-029232	Dasypus novemcinctus	43.64	4.00e-24	102.00
IUUC-Dor-030996	Dipodomys ordii	40.26	2.00e-11	61.20
IUUC-Dse-031359	Dothistroma septosporum	39.07	6.00e-57	212.00
IUUC-Dme-031992	Drosophila melanogaster	43.64	2.00e-23	100.00
IUUC-Ete-032973	Echinops telfairi	51.61	9.00e-05	38.90
IUUC-Eca-034116	Equus caballus	43.64	3.00e-24	103.00
IUUC-Eeu-035143	Erinaceus europaeus	38.16	3.00e-11	60.50
IUUC-Fca-035960	Felis catus	43.64	4.00e-24	103.00
IUUC-Fal-037039	Ficedula albicollis	33.33	3.00e-16	76.60
IUUC-Fox-037882	Fusarium oxysporum	53.31	1.00e-93	334.00
IUUC-Fso-038318	Fusarium solani	55.87	2.00e-103	367.00
IUUC-Gmo-038905	Gadus morhua	34.53	2.00e-21	94.40
IUUC-Ggr-039857	Gaeumannomyces graminis	43.99	3.00e-52	196.00
IUUC-Gga-041216	Gallus gallus	35.77	1.00e-22	98.60
IUUC-Gac-041987	Gasterosteus aculeatus	36.50	3.00e-23	100.00
IUUC-Gma-044312	Glycine max	53.49	8.00e-11	58.20
IUUC-Ggo-044930	Gorilla gorilla	42.11	8.00e-14	68.90
IUUC-Hsa-045876	Homo sapiens	43.64	3.00e-24	103.00
IUUC-Hvu-047088	Hordeum vulgare	48.84	3.00e-09	52.80
IUUC-Itr-048476	Ictidomys tridecemlineatus	37.07	8.00e-20	88.20
IUUC-Kpa-049202	Komagataella pastoris	32.40	1.00e-38	151.00
IUUC-Lch-049886	Latimeria chalumnae	41.82	8.00e-22	95.50
IUUC-Lpe-051199	Leersia perrieri	53.49	3.00e-10	56.20
IUUC-Loc-052556	Lepisosteus oculatus	41.82	2.00e-23	100.00
IUUC-Lma-053002	Leptosphaeria maculans	34.01	8.00e-48	182.00
IUUC-Laf-054516	Loxodonta africana	27.33	1.00e-23	102.00
IUUC-Mcc-054761	Macaca mulatta	43.64	3.00e-24	103.00
IUUC-Mor-057048	Magnaporthe oryzae	47.15	8.00e-68	248.00
IUUC-Mpo-057598	Magnaporthe poae	53.27	1.00e-22	97.40
IUUC-Mtr-058131	Medicago truncatula	39.39	1.00e-10	57.80
IUUC-Mla-059009	Melampsora laricipopulina	45.86	1.00e-32	130.00
IUUC-Mga-060199	Meleagris gallopavo	34.23	3.00e-16	76.60
IUUC-Mvi-060382	Microbotryum violaceum	44.85	6.00e-30	123.00
IUUC-Mmr-061671	Microcebus murinus	43.64	6.00e-24	102.00
IUUC-Mdo-062228	Monodelphis domestica	28.71	5.00e-24	103.00
IUUC-Mmu-064416	Mus musculus	29.49	2.00e-24	104.00
IUUC-Mac-064807	Musa acuminata	40.91	7.00e-10	55.10
IUUC-Mpu-066455	Mustela putorius furo	27.65	4.00e-24	103.00
IUUC-Mlu-067325	Myotis lucifugus	43.82	1.00e-19	87.40
IUUC-Nfi-068566	Neosartorya fischeri	37.68	8.00e-55	205.00
IUUC-Ncr-068687	Neurospora crassa	47.12	1.00e-73	268.00
IUUC-Nle-069937	Nomascus leucogenys	43.64	3.00e-24	103.00
IUUC-Opr-070321	Ochotona princeps	34.95	5.00e-15	73.20
IUUC-Ont-072636	Oreochromis niloticus	43.64	2.00e-24	104.00
IUUC-Oan-072915	Ornithorhynchus anatinus	35.71	2.00e-12	64.30
IUUC-Ocu-074547	Oryctolagus cuniculus	43.64	5.00e-24	102.00
IUUC-Oba-075269	Oryza barthii	51.16	4.00e-10	55.80
IUUC-Obr-076081	Oryza brachyantha	51.16	8.00e-10	55.10
IUUC-Ogl-077011	Oryza glaberrima	51.16	4.00e-10	55.80
IUUC-Ogu-078667	Oryza glumaepatula	51.16	4.00e-10	55.80
IUUC-Oin-079153	Oryza indica	51.16	4.00e-10	55.80
IUUC-Olo-080344	Oryza longistaminata	37.31	5.00e-07	45.80
IUUC-Ome-081805	Oryza meridionalis	48.84	2.00e-09	54.30
IUUC-Oni-082783	Oryza nivara	48.84	2.00e-09	53.50
IUUC-Opu-083247	Oryza punctata	48.84	7.00e-10	55.10
IUUC-Oru-085262	Oryza rufipogon	51.16	4.00e-10	55.80
IUUC-Osa-086250	Oryza sativa	51.16	3.00e-10	56.20
IUUC-Ola-086780	Oryzias latipes	44.55	1.00e-25	108.00
IUUC-Olu-087653	Ostreococcus lucimarinus	51.16	2.00e-07	46.60
IUUC-Oga-088012	Otolemur garnettii	43.64	1.00e-23	101.00
IUUC-Oar-090274	Ovis aries	35.45	4.00e-16	76.60
IUUC-Ptr-090780	Pan troglodytes	43.64	3.00e-24	103.00
IUUC-Pan-091815	Papio anubis	37.61	1.00e-17	80.90
IUUC-Psi-093883	Pelodiscus sinensis	36.50	1.00e-23	102.00
IUUC-Pma-094717	Petromyzon marinus	46.34	5.00e-07	46.20
IUUC-Pno-094958	Phaeosphaeria nodorum	35.69	2.00e-52	197.00
IUUC-Ppa-095445	Physcomitrella patens	44.44	1.00e-08	51.20
IUUC-Pfo-096051	Poecilia formosa	45.45	9.00e-26	108.00
IUUC-Pab-097609	Pongo abelii	42.73	8.00e-24	102.00
IUUC-Pop-099460	Populus trichocarpa	55.81	2.00e-10	57.40
IUUC-Pca-101094	Procavia capensis	26.76	1.00e-17	82.00
IUUC-Ppe-101481	Prunus persica	53.49	9.00e-11	58.20
IUUC-Pva-103219	Pteropus vampyrus	43.64	4.00e-24	103.00
IUUC-Pgr-103557	Puccinia graminis	44.20	3.00e-32	130.00
IUUC-Ptt-103719	Puccinia triticina	45.14	8.00e-34	135.00
IUUC-Pte-104301	Pyrenophora teres	52.59	2.00e-37	147.00
IUUC-Pyt-104486	Pyrenophora triticirepentis	57.14	4.00e-37	146.00
IUUC-Rno-105846	Rattus norvegicus	37.23	3.00e-24	103.00
IUUC-Sce-106405	Saccharomyces cerevisiae	34.46	4.00e-42	163.00
IUUC-Sha-107594	Sarcophilus harrisii	42.86	7.00e-17	78.20
IUUC-Sja-107951	Schizosaccharomyces japonicus	30.48	2.00e-33	134.00
IUUC-Spo-108137	Schizosaccharomyces pombe	56.48	7.00e-37	145.00
IUUC-Ssl-108503	Sclerotinia sclerotiorum	50.14	3.00e-79	286.00
IUUC-Smo-109621	Selaginella moellendorffii	38.24	9.00e-10	54.70
IUUC-Sit-110672	Setaria italica	46.51	3.00e-09	53.10
IUUC-Sly-111744	Solanum lycopersicum	44.19	2.00e-08	50.40
IUUC-Stu-112343	Solanum tuberosum	44.19	2.00e-08	50.10
IUUC-Sar-113298	Sorex araneus	42.73	2.00e-23	100.00
IUUC-Sbi-113918	Sorghum bicolor	48.84	5.00e-10	55.80
IUUC-Sre-114991	Sporisorium reilianum	43.56	7.00e-26	109.00
IUUC-Ssc-116152	Sus scrofa	44.05	8.00e-18	81.60
IUUC-Tgu-116452	Taeniopygia guttata	35.04	1.00e-22	98.60
IUUC-Tru-118621	Takifugu rubripes	40.18	1.00e-21	95.10
IUUC-Tsy-119500	Tarsius syrichta	44.55	1.00e-24	105.00
IUUC-Tni-120454	Tetraodon nigroviridis	38.24	3.00e-13	67.40
IUUC-Tca-121192	Theobroma cacao	53.49	5.00e-11	58.90
IUUC-Tre-122011	Trichoderma reesei	52.15	6.00e-93	332.00
IUUC-Tvi-122317	Trichoderma virens	54.31	5.00e-102	362.00
IUUC-Tae-123854	Triticum aestivum	51.16	1.00e-09	54.30
IUUC-Tur-126556	Triticum urartu	51.16	1.00e-09	54.30
IUUC-Tme-127135	Tuber melanosporum	38.99	2.00e-46	177.00
IUUC-Tbe-127287	Tupaia belangeri	42.86	1.00e-14	72.00
IUUC-Ttr-128864	Tursiops truncatus	43.64	4.00e-24	103.00
IUUC-Uma-129539	Ustilago maydis	49.18	2.00e-28	117.00
IUUC-Vpa-130462	Vicugna pacos	25.96	6.00e-17	79.30
IUUC-Vvi-130988	Vitis vinifera	50.00	2.00e-10	57.00
IUUC-Xtr-131830	Xenopus tropicalis	40.00	2.00e-23	100.00
IUUC-Xma-133952	Xiphophorus maculatus	45.45	6.00e-26	108.00
IUUC-Yli-134433	Yarrowia lipolytica	36.28	8.00e-51	192.00
IUUC-Zma-134867	Zea mays	48.84	9.00e-10	54.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence