iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle++++     l++ C+H fh +Clq+w           +CP+Cr
   Q: 263  CTVCLERMDESvngILTTLCNHSFHSQCLQRW--------DDTTCPVCR 303
           9*******77333366777*************........8889****8 PP

UBD/ZnF/ZnF_UBP

   S: 2    kcsvcdktenlWlcLtcgsvgCGRyvegHalkHyeetqhplvlslstlsvycYacddyvhr 62
           kc +c+ +enlW+cL+cg++gCGRyv+ Ha kH+eetqh ++++l + +v++Ya+d+yvhr
   Q: 315  KCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHR 375
           8**********************************************************96 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSVSLVVIRL ELAGHSPVPA DFGFSAAAGE MSNEEIKKKT LASAAACLEG KSPGEKAAII 60
HQHLGRREMT DVIIETMKAS ADEFRDTSEE KTSSAAPSSA QRSREQSESV NTVPDSPSKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTGTGT CACTGGTGGT CATCCGACTG GAGCTCGCGG GTCACTCGCC GGTCCCCGCC 60
GATTTCGGCT TCAGCGCTGC CGGTGAGTCC GCGGCCTCGC GCAGGGTCGG CGAGTCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR011422--BRAP2
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50089--ZF_RING_2
PS50271--ZF_UBP

Pfam

PF07576--BRAP2
PF13639--zf-RING_2
PF02148--zf-UBP

SMART

SM00184--RING
SM00290--ZnF_UBP

Gene Ontology

GO:0005829--C:cytosol
GO:0031965--C:nuclear membrane
GO:0000151--C:ubiquitin ligase complex
GO:0008139--F:nuclear localization sequence binding
GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0000165--P:MAPK cascade
GO:0009968--P:negative regulation of signal transduction
GO:0007265--P:Ras protein signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000519	Aegilops tauschii	35.29	3.00e-49	189.00
IUUC-Aml-002229	Ailuropoda melanoleuca	78.37	0.00e+00	888.00
IUUC-Atr-002785	Amborella trichopoda	44.83	2.00e-75	276.00
IUUC-Apl-004048	Anas platyrhynchos	75.46	0.00e+00	736.00
IUUC-Aca-005133	Anolis carolinensis	72.73	0.00e+00	771.00
IUUC-Aly-005646	Arabidopsis lyrata	43.39	3.00e-71	262.00
IUUC-Ath-007604	Arabidopsis thaliana	43.58	4.00e-70	258.00
IUUC-Ago-007905	Ashbya gossypii	36.36	2.00e-60	226.00
IUUC-Acl-008310	Aspergillus clavatus	37.31	1.00e-56	214.00
IUUC-Afl-008497	Aspergillus flavus	43.72	2.00e-43	170.00
IUUC-Afu-008830	Aspergillus fumigatus	35.48	4.00e-56	212.00
IUUC-Ani-009485	Aspergillus nidulans	36.31	6.00e-56	211.00
IUUC-Ang-009603	Aspergillus niger	39.86	1.00e-55	211.00
IUUC-Aor-009935	Aspergillus oryzae	43.72	1.00e-43	171.00
IUUC-Ate-010485	Aspergillus terreus	35.96	2.00e-57	216.00
IUUC-Ame-011516	Astyanax mexicanus	68.43	6.00e-170	590.00
IUUC-Bgr-011985	Blumeria graminis	28.35	6.00e-37	149.00
IUUC-Bta-013203	Bos taurus	79.12	0.00e+00	905.00
IUUC-Bci-013788	Botrytis cinerea	30.70	2.00e-45	177.00
IUUC-Bdi-014763	Brachypodium distachyon	44.60	2.00e-72	266.00
IUUC-Bol-015518	Brassica oleracea	42.81	3.00e-68	253.00
IUUC-Bra-017435	Brassica rapa	42.21	6.00e-69	254.00
IUUC-Cel-018194	Caenorhabditis elegans	35.93	2.00e-86	313.00
IUUC-Cja-018948	Callithrix jacchus	78.06	0.00e+00	856.00
IUUC-Cfa-020377	Canis familiaris	77.50	0.00e+00	909.00
IUUC-Cpo-021930	Cavia porcellus	79.26	0.00e+00	883.00
IUUC-Cre-022571	Chlamydomonas reinhardtii	42.35	6.00e-57	213.00
IUUC-Csa-023554	Chlorocebus sabaeus	83.19	0.00e+00	812.00
IUUC-Cho-025045	Choloepus hoffmanni	87.55	4.00e-127	448.00
IUUC-Cin-025326	Ciona intestinalis	38.59	1.00e-87	317.00
IUUC-Csv-026232	Ciona savignyi	50.69	3.00e-89	322.00
IUUC-Cgl-026587	Colletotrichum gloeosporioides	30.40	1.00e-46	181.00
IUUC-Cne-026980	Cryptococcus neoformans	29.08	3.00e-49	190.00
IUUC-Cme-027262	Cyanidioschyzon merolae	39.85	3.00e-55	209.00
IUUC-Dre-028521	Danio rerio	65.37	0.00e+00	746.00
IUUC-Dno-029291	Dasypus novemcinctus	76.18	0.00e+00	870.00
IUUC-Dor-030231	Dipodomys ordii	73.23	0.00e+00	820.00
IUUC-Dse-031234	Dothistroma septosporum	35.53	1.00e-45	177.00
IUUC-Dme-032095	Drosophila melanogaster	49.53	2.00e-93	336.00
IUUC-Ete-032227	Echinops telfairi	81.35	8.00e-179	620.00
IUUC-Eca-034404	Equus caballus	79.82	0.00e+00	912.00
IUUC-Eeu-035030	Erinaceus europaeus	73.24	3.00e-123	435.00
IUUC-Fca-035428	Felis catus	79.08	0.00e+00	903.00
IUUC-Fal-037435	Ficedula albicollis	75.34	0.00e+00	783.00
IUUC-Fox-037733	Fusarium oxysporum	33.24	3.00e-52	199.00
IUUC-Fso-038427	Fusarium solani	32.95	8.00e-52	198.00
IUUC-Gmo-038817	Gadus morhua	63.57	0.00e+00	701.00
IUUC-Ggr-039949	Gaeumannomyces graminis	35.59	6.00e-49	189.00
IUUC-Gga-040929	Gallus gallus	75.00	0.00e+00	793.00
IUUC-Gac-041893	Gasterosteus aculeatus	65.60	0.00e+00	722.00
IUUC-Gma-043119	Glycine max	47.49	8.00e-73	267.00
IUUC-Ggo-045106	Gorilla gorilla	87.39	0.00e+00	800.00
IUUC-Hsa-045685	Homo sapiens	76.65	0.00e+00	902.00
IUUC-Hvu-047475	Hordeum vulgare	48.60	2.00e-27	115.00
IUUC-Itr-048406	Ictidomys tridecemlineatus	80.00	0.00e+00	893.00
IUUC-Kpa-049175	Komagataella pastoris	38.93	1.00e-59	224.00
IUUC-Lch-050408	Latimeria chalumnae	68.77	0.00e+00	808.00
IUUC-Lpe-050777	Leersia perrieri	40.16	5.00e-57	215.00
IUUC-Loc-052160	Lepisosteus oculatus	55.61	1.00e-167	583.00
IUUC-Lma-053095	Leptosphaeria maculans	35.41	6.00e-60	225.00
IUUC-Laf-053497	Loxodonta africana	78.62	0.00e+00	895.00
IUUC-Mcc-055381	Macaca mulatta	78.58	0.00e+00	904.00
IUUC-Meu-056402	Macropus eugenii	53.76	2.00e-133	469.00
IUUC-Mor-057002	Magnaporthe oryzae	32.95	9.00e-51	195.00
IUUC-Mpo-057508	Magnaporthe poae	32.62	5.00e-48	186.00
IUUC-Mtr-058619	Medicago truncatula	42.86	2.00e-61	229.00
IUUC-Mla-058901	Melampsora laricipopulina	39.30	2.00e-58	220.00
IUUC-Mga-059667	Meleagris gallopavo	73.36	0.00e+00	728.00
IUUC-Mvi-060229	Microbotryum violaceum	34.97	6.00e-55	209.00
IUUC-Mmr-060881	Microcebus murinus	71.45	0.00e+00	765.00
IUUC-Mdo-062573	Monodelphis domestica	75.44	0.00e+00	806.00
IUUC-Mmu-063656	Mus musculus	82.37	0.00e+00	961.00
IUUC-Mac-065512	Musa acuminata	45.96	4.00e-74	272.00
IUUC-Mpu-065816	Mustela putorius furo	78.94	0.00e+00	902.00
IUUC-Mlu-067225	Myotis lucifugus	76.91	0.00e+00	897.00
IUUC-Nfi-068534	Neosartorya fischeri	35.48	3.00e-56	213.00
IUUC-Ncr-068801	Neurospora crassa	32.61	2.00e-51	197.00
IUUC-Nle-069258	Nomascus leucogenys	79.58	0.00e+00	844.00
IUUC-Opr-070877	Ochotona princeps	66.19	0.00e+00	702.00
IUUC-Ont-072141	Oreochromis niloticus	65.78	0.00e+00	733.00
IUUC-Oan-072961	Ornithorhynchus anatinus	73.11	0.00e+00	806.00
IUUC-Ocu-074020	Oryctolagus cuniculus	83.16	0.00e+00	810.00
IUUC-Oba-075084	Oryza barthii	36.03	2.00e-57	216.00
IUUC-Obr-076840	Oryza brachyantha	45.76	1.00e-69	257.00
IUUC-Ogl-077880	Oryza glaberrima	47.94	3.00e-71	262.00
IUUC-Ogu-078968	Oryza glumaepatula	36.03	2.00e-57	216.00
IUUC-Oin-079200	Oryza indica	47.94	3.00e-71	262.00
IUUC-Olo-080753	Oryza longistaminata	42.93	1.00e-50	193.00
IUUC-Ome-081756	Oryza meridionalis	36.03	5.00e-57	215.00
IUUC-Oni-082434	Oryza nivara	36.03	2.00e-57	216.00
IUUC-Opu-083262	Oryza punctata	35.66	1.00e-56	214.00
IUUC-Oru-084381	Oryza rufipogon	36.03	2.00e-57	216.00
IUUC-Osa-085760	Oryza sativa	47.94	2.00e-70	258.00
IUUC-Ola-087390	Oryzias latipes	63.22	0.00e+00	679.00
IUUC-Olu-087694	Ostreococcus lucimarinus	35.16	2.00e-45	176.00
IUUC-Oga-088612	Otolemur garnettii	79.29	0.00e+00	888.00
IUUC-Oar-089988	Ovis aries	78.72	0.00e+00	891.00
IUUC-Ptr-090637	Pan troglodytes	76.82	0.00e+00	904.00
IUUC-Pan-092506	Papio anubis	78.58	0.00e+00	903.00
IUUC-Psi-093026	Pelodiscus sinensis	73.01	0.00e+00	768.00
IUUC-Pno-094779	Phaeosphaeria nodorum	32.06	4.00e-39	155.00
IUUC-Ppa-095731	Physcomitrella patens	47.62	9.00e-77	281.00
IUUC-Pfo-096725	Poecilia formosa	65.60	0.00e+00	722.00
IUUC-Pab-098413	Pongo abelii	72.37	2.00e-155	541.00
IUUC-Pop-099538	Populus trichocarpa	47.33	1.00e-73	270.00
IUUC-Pca-100130	Procavia capensis	65.84	0.00e+00	725.00
IUUC-Ppe-101843	Prunus persica	44.53	9.00e-72	264.00
IUUC-Pva-102752	Pteropus vampyrus	73.10	0.00e+00	823.00
IUUC-Pgr-103478	Puccinia graminis	38.46	3.00e-59	223.00
IUUC-Ptt-103921	Puccinia triticina	42.98	2.00e-58	220.00
IUUC-Pte-104032	Pyrenophora teres	35.71	6.00e-60	225.00
IUUC-Pyt-104480	Pyrenophora triticirepentis	35.42	6.00e-60	225.00
IUUC-Sce-106310	Saccharomyces cerevisiae	37.85	4.00e-54	205.00
IUUC-Sha-106752	Sarcophilus harrisii	72.79	0.00e+00	830.00
IUUC-Sja-107665	Schizosaccharomyces japonicus	42.45	5.00e-66	245.00
IUUC-Spo-108042	Schizosaccharomyces pombe	38.13	2.00e-59	223.00
IUUC-Ssl-108504	Sclerotinia sclerotiorum	32.97	1.00e-44	175.00
IUUC-Smo-109657	Selaginella moellendorffii	44.07	9.00e-77	280.00
IUUC-Sit-110251	Setaria italica	47.62	6.00e-76	278.00
IUUC-Sly-111563	Solanum lycopersicum	46.30	5.00e-70	258.00
IUUC-Stu-112294	Solanum tuberosum	45.02	2.00e-69	256.00
IUUC-Sar-113080	Sorex araneus	77.71	5.00e-144	503.00
IUUC-Sbi-113915	Sorghum bicolor	48.18	8.00e-77	280.00
IUUC-Sre-114897	Sporisorium reilianum	35.99	3.00e-57	216.00
IUUC-Ssc-115369	Sus scrofa	87.71	1.00e-95	342.00
IUUC-Tgu-116710	Taeniopygia guttata	73.45	0.00e+00	827.00
IUUC-Tru-117941	Takifugu rubripes	65.73	0.00e+00	720.00
IUUC-Tsy-118902	Tarsius syrichta	65.60	1.00e-77	283.00
IUUC-Tni-120587	Tetraodon nigroviridis	66.08	0.00e+00	750.00
IUUC-Tca-121425	Theobroma cacao	46.00	1.00e-77	283.00
IUUC-Tre-121874	Trichoderma reesei	33.05	9.00e-51	195.00
IUUC-Tvi-122266	Trichoderma virens	33.33	1.00e-52	201.00
IUUC-Tae-122790	Triticum aestivum	44.57	1.00e-69	256.00
IUUC-Tur-126467	Triticum urartu	41.85	2.00e-45	176.00
IUUC-Tme-127096	Tuber melanosporum	47.27	1.00e-43	171.00
IUUC-Tbe-128012	Tupaia belangeri	74.90	0.00e+00	726.00
IUUC-Ttr-128388	Tursiops truncatus	79.47	0.00e+00	911.00
IUUC-Uma-129610	Ustilago maydis	33.33	7.00e-55	208.00
IUUC-Vda-129830	Verticillium dahliae	31.94	4.00e-43	169.00
IUUC-Vpa-130171	Vicugna pacos	77.83	0.00e+00	905.00
IUUC-Vvi-131063	Vitis vinifera	47.37	2.00e-75	276.00
IUUC-Xtr-132313	Xenopus tropicalis	69.32	0.00e+00	808.00
IUUC-Xma-133303	Xiphophorus maculatus	64.91	0.00e+00	717.00
IUUC-Yli-134669	Yarrowia lipolytica	37.50	3.00e-50	192.00
IUUC-Zma-135783	Zea mays	47.45	5.00e-75	275.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence