iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001948

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01026437

Gene Name

LRWD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000015465.1	ENSAMET00000016997.1	ENSAMEP00000016321.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-07	29.8	498	529

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           H+  +  l+f  +  t+l ++s+D+ i +WDl
   Q: 498  HKKAIATLCFspTHeTHLFTASYDKRIILWDL 529
           88889999***6447****************7 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

ATGLLAMGPL SARLLMQRGR PKSDRLGKIR SLDLSGLKLL SEHLDPKLLS RLTQLQELDL 60
SNNQLETLPA NLGLAHLRIL RCANNQLGDV TALCQFPQLE ELSLEGNPFL TVSDNLKVSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTACCGGCC TTCTCGCTAT GGGCCCCCTC TCGGCGCGGC TGCTCATGCA GCGAGGGCGT 60
CCCAAGAGCG ACCGGCTGGG GAAGATCCGG AGCCTGGAGT AAGAGGCGGG CTGGGGGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR025875--Leu-rich_rpt_4
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51450--LRR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12799--LRR_4

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000776--C:kinetochore
GO:0005664--C:nuclear origin of replication recognition complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005721--C:pericentric heterochromatin
GO:0031933--C:telomeric heterochromatin
GO:0003682--F:chromatin binding
GO:0008327--F:methyl-CpG binding
GO:0006325--P:chromatin organization
GO:0071169--P:establishment of protein localization to chromatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-012858	Bos taurus	80.00	0.00e+00	659.00
IUUC-Cja-019702	Callithrix jacchus	84.30	0.00e+00	665.00
IUUC-Cfa-020910	Canis familiaris	87.96	0.00e+00	696.00
IUUC-Cpo-022523	Cavia porcellus	80.32	0.00e+00	681.00
IUUC-Csa-023359	Chlorocebus sabaeus	84.99	0.00e+00	678.00
IUUC-Dno-029426	Dasypus novemcinctus	85.45	0.00e+00	692.00
IUUC-Dor-030654	Dipodomys ordii	81.75	0.00e+00	644.00
IUUC-Eca-034035	Equus caballus	85.19	0.00e+00	678.00
IUUC-Eeu-034711	Erinaceus europaeus	74.88	8.00e-166	577.00
IUUC-Gmo-039096	Gadus morhua	39.27	6.00e-78	285.00
IUUC-Ggo-044714	Gorilla gorilla	84.53	0.00e+00	677.00
IUUC-Hsa-046826	Homo sapiens	84.76	0.00e+00	679.00
IUUC-Laf-054449	Loxodonta africana	59.10	0.00e+00	689.00
IUUC-Mcc-055193	Macaca mulatta	85.68	0.00e+00	681.00
IUUC-Mmr-061572	Microcebus murinus	85.51	0.00e+00	719.00
IUUC-Mmu-063240	Mus musculus	76.74	0.00e+00	659.00
IUUC-Mpu-066295	Mustela putorius furo	88.68	0.00e+00	701.00
IUUC-Mlu-067766	Myotis lucifugus	83.60	0.00e+00	709.00
IUUC-Nle-069200	Nomascus leucogenys	80.62	0.00e+00	638.00
IUUC-Ola-086965	Oryzias latipes	35.86	8.00e-122	431.00
IUUC-Oga-088411	Otolemur garnettii	76.10	0.00e+00	1057.00
IUUC-Oar-089415	Ovis aries	80.92	0.00e+00	659.00
IUUC-Ptr-090663	Pan troglodytes	84.53	0.00e+00	677.00
IUUC-Pan-092467	Papio anubis	85.75	0.00e+00	685.00
IUUC-Pab-098479	Pongo abelii	84.06	0.00e+00	674.00
IUUC-Pca-101023	Procavia capensis	77.75	2.00e-163	568.00
IUUC-Pva-102812	Pteropus vampyrus	76.68	0.00e+00	633.00
IUUC-Rno-105469	Rattus norvegicus	77.67	0.00e+00	650.00
IUUC-Ssc-115884	Sus scrofa	84.14	0.00e+00	681.00
IUUC-Tbe-127247	Tupaia belangeri	87.12	1.00e-119	423.00
IUUC-Ttr-128723	Tursiops truncatus	82.96	0.00e+00	672.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence