iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-38	129.6	105	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllk 37
           Ht +v+++++    d  l+vsGs+D t+kvWD++ g++l+
   Q: 105  HTQEVYSVDWsqtRDeQLVVSGSWDQTVKVWDPTVGNSLC 144
           9**********9977799***************9999886 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSAARTLRVP GRHGYAVEFS PYLPGRLACA AAQHYGIAGC GTLLVLDQNE SGLQIFRSFD 60
WNDGLFDVTW SENNEHVLVT CSGDGSLQLW DTAKATGPLQ VYKEHTQEVY SVDWSQTRDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAAAAGAA AAATGGTCTT CCCGGAGTCC TCTTCCTTTT CTATGTGGAC CAATCAAAAT 60
CTAGGATTCC GCGGGTCGGC GTCGTCACTT CCGCCCGGCC TTCCCTAAGT TCTCTCAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005782--C:peroxisomal matrix
GO:0005053--F:peroxisome matrix targeting signal-2 binding
GO:0001958--P:endochondral ossification
GO:0008611--P:ether lipid biosynthetic process
GO:0006635--P:fatty acid beta-oxidation
GO:0001764--P:neuron migration
GO:0016558--P:protein import into peroxisome matrix

KEGG

rno:308718

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001966	Ailuropoda melanoleuca	93.16	4.00e-176	610.00
IUUC-Atr-003127	Amborella trichopoda	45.97	2.00e-79	288.00
IUUC-Apl-004050	Anas platyrhynchos	80.63	5.00e-141	493.00
IUUC-Aca-004489	Anolis carolinensis	81.99	3.00e-159	553.00
IUUC-Aly-006031	Arabidopsis lyrata	43.05	7.00e-71	260.00
IUUC-Ath-007361	Arabidopsis thaliana	44.04	7.00e-72	263.00
IUUC-Ago-007708	Ashbya gossypii	33.15	9.00e-47	180.00
IUUC-Acl-008039	Aspergillus clavatus	32.38	1.00e-45	177.00
IUUC-Afl-008394	Aspergillus flavus	33.33	1.00e-48	186.00
IUUC-Afu-008754	Aspergillus fumigatus	33.81	2.00e-46	179.00
IUUC-Ani-009421	Aspergillus nidulans	33.91	2.00e-49	189.00
IUUC-Ang-009727	Aspergillus niger	38.56	1.00e-53	203.00
IUUC-Aor-010236	Aspergillus oryzae	33.33	1.00e-48	186.00
IUUC-Ate-010324	Aspergillus terreus	33.91	2.00e-49	189.00
IUUC-Ame-011226	Astyanax mexicanus	71.70	3.00e-138	484.00
IUUC-Bgr-012081	Blumeria graminis	35.65	3.00e-47	182.00
IUUC-Bta-013366	Bos taurus	92.68	6.00e-179	619.00
IUUC-Bci-013909	Botrytis cinerea	34.34	2.00e-43	169.00
IUUC-Bdi-014172	Brachypodium distachyon	43.56	4.00e-73	268.00
IUUC-Bol-015677	Brassica oleracea	44.04	7.00e-73	267.00
IUUC-Bra-017284	Brassica rapa	43.71	9.00e-73	266.00
IUUC-Cja-019975	Callithrix jacchus	92.41	2.00e-179	621.00
IUUC-Cfa-020059	Canis familiaris	94.30	0.00e+00	634.00
IUUC-Cpo-021881	Cavia porcellus	93.35	1.00e-180	625.00
IUUC-Cre-022741	Chlamydomonas reinhardtii	42.30	3.00e-69	254.00
IUUC-Csa-024220	Chlorocebus sabaeus	91.34	1.00e-153	535.00
IUUC-Cho-024382	Choloepus hoffmanni	82.80	8.00e-139	486.00
IUUC-Cin-025606	Ciona intestinalis	47.25	1.00e-44	172.00
IUUC-Csv-026072	Ciona savignyi	47.17	1.00e-86	313.00
IUUC-Cne-027080	Cryptococcus neoformans	35.17	1.00e-50	193.00
IUUC-Dre-028830	Danio rerio	70.10	6.00e-136	476.00
IUUC-Dno-029570	Dasypus novemcinctus	92.48	4.00e-179	620.00
IUUC-Dor-030458	Dipodomys ordii	68.67	4.00e-118	417.00
IUUC-Dse-031399	Dothistroma septosporum	34.52	1.00e-51	196.00
IUUC-Dme-031641	Drosophila melanogaster	41.98	7.00e-70	257.00
IUUC-Ete-032339	Echinops telfairi	91.77	1.00e-177	615.00
IUUC-Eca-034154	Equus caballus	92.50	2.00e-159	554.00
IUUC-Eeu-034764	Erinaceus europaeus	88.36	1.00e-170	592.00
IUUC-Fca-036310	Felis catus	90.65	4.00e-152	530.00
IUUC-Fal-036714	Ficedula albicollis	84.17	4.00e-144	503.00
IUUC-Fox-037723	Fusarium oxysporum	35.76	2.00e-52	199.00
IUUC-Fso-038438	Fusarium solani	34.10	1.00e-46	180.00
IUUC-Gmo-038852	Gadus morhua	57.48	7.00e-92	330.00
IUUC-Ggr-040004	Gaeumannomyces graminis	34.71	1.00e-45	177.00
IUUC-Gga-040465	Gallus gallus	84.19	4.00e-160	556.00
IUUC-Gac-042212	Gasterosteus aculeatus	67.41	4.00e-123	434.00
IUUC-Gma-042686	Glycine max	43.89	1.00e-72	266.00
IUUC-Ggo-045510	Gorilla gorilla	87.97	5.00e-171	593.00
IUUC-Hsa-046391	Homo sapiens	91.14	1.00e-177	615.00
IUUC-Hvu-047261	Hordeum vulgare	44.88	2.00e-73	268.00
IUUC-Itr-048170	Ictidomys tridecemlineatus	95.45	1.00e-98	351.00
IUUC-Kpa-049116	Komagataella pastoris	32.33	7.00e-43	167.00
IUUC-Lch-050018	Latimeria chalumnae	79.26	1.00e-61	228.00
IUUC-Lpe-051285	Leersia perrieri	44.22	5.00e-74	271.00
IUUC-Loc-051817	Lepisosteus oculatus	73.73	9.00e-97	345.00
IUUC-Lma-053274	Leptosphaeria maculans	33.43	2.00e-43	169.00
IUUC-Laf-053781	Loxodonta africana	93.06	2.00e-180	624.00
IUUC-Mcc-054938	Macaca mulatta	91.86	9.00e-173	598.00
IUUC-Meu-056863	Macropus eugenii	83.27	4.00e-138	483.00
IUUC-Mor-057017	Magnaporthe oryzae	36.23	1.00e-51	196.00
IUUC-Mpo-057357	Magnaporthe poae	32.82	2.00e-38	152.00
IUUC-Mtr-058152	Medicago truncatula	44.55	3.00e-73	268.00
IUUC-Mga-059292	Meleagris gallopavo	84.10	2.00e-145	508.00
IUUC-Mvi-060494	Microbotryum violaceum	35.81	4.00e-59	221.00
IUUC-Mmr-060856	Microcebus murinus	93.35	3.00e-179	620.00
IUUC-Mdo-062810	Monodelphis domestica	89.21	7.00e-174	602.00
IUUC-Mmu-063693	Mus musculus	97.48	0.00e+00	647.00
IUUC-Mac-065170	Musa acuminata	45.21	1.00e-74	273.00
IUUC-Mpu-066229	Mustela putorius furo	93.99	0.00e+00	631.00
IUUC-Mlu-067861	Myotis lucifugus	91.45	2.00e-147	514.00
IUUC-Nfi-068268	Neosartorya fischeri	33.52	4.00e-46	178.00
IUUC-Ncr-068756	Neurospora crassa	34.16	2.00e-47	182.00
IUUC-Nle-070047	Nomascus leucogenys	89.87	3.00e-174	604.00
IUUC-Opr-070256	Ochotona princeps	75.66	4.00e-133	467.00
IUUC-Ont-071850	Oreochromis niloticus	70.16	2.00e-136	478.00
IUUC-Oan-073642	Ornithorhynchus anatinus	87.77	1.00e-121	429.00
IUUC-Ocu-074437	Oryctolagus cuniculus	93.35	0.00e+00	627.00
IUUC-Oba-075964	Oryza barthii	44.26	3.00e-73	268.00
IUUC-Obr-076872	Oryza brachyantha	43.75	3.00e-73	268.00
IUUC-Ogl-077459	Oryza glaberrima	43.93	3.00e-73	268.00
IUUC-Ogu-078461	Oryza glumaepatula	44.34	6.00e-74	270.00
IUUC-Oin-079865	Oryza indica	44.26	1.00e-73	269.00
IUUC-Olo-081022	Oryza longistaminata	48.41	1.00e-42	165.00
IUUC-Ome-081607	Oryza meridionalis	44.26	1.00e-73	269.00
IUUC-Oni-082386	Oryza nivara	44.26	1.00e-73	269.00
IUUC-Opu-083636	Oryza punctata	43.69	6.00e-73	267.00
IUUC-Oru-084504	Oryza rufipogon	43.97	2.00e-73	268.00
IUUC-Osa-086268	Oryza sativa	44.26	1.00e-73	269.00
IUUC-Ola-086475	Oryzias latipes	71.29	2.00e-136	478.00
IUUC-Olu-087686	Ostreococcus lucimarinus	41.99	3.00e-71	261.00
IUUC-Oga-088529	Otolemur garnettii	95.04	2.00e-149	521.00
IUUC-Oar-089862	Ovis aries	92.45	4.00e-157	546.00
IUUC-Ptr-090607	Pan troglodytes	90.82	8.00e-177	612.00
IUUC-Pan-092393	Papio anubis	90.00	2.00e-172	598.00
IUUC-Psi-093958	Pelodiscus sinensis	86.07	7.00e-149	519.00
IUUC-Pma-094611	Petromyzon marinus	69.33	1.00e-129	455.00
IUUC-Pno-094866	Phaeosphaeria nodorum	33.14	7.00e-44	171.00
IUUC-Ppa-095768	Physcomitrella patens	46.67	9.00e-80	290.00
IUUC-Pab-097924	Pongo abelii	91.77	2.00e-178	618.00
IUUC-Pop-100046	Populus trichocarpa	42.90	2.00e-70	259.00
IUUC-Pca-100754	Procavia capensis	77.92	4.00e-144	503.00
IUUC-Ppe-102047	Prunus persica	41.75	5.00e-71	261.00
IUUC-Pva-102614	Pteropus vampyrus	93.35	0.00e+00	629.00
IUUC-Pgr-103662	Puccinia graminis	39.01	1.00e-60	226.00
IUUC-Ptt-103891	Puccinia triticina	34.67	2.00e-49	189.00
IUUC-Pte-104317	Pyrenophora teres	33.91	1.00e-41	163.00
IUUC-Pyt-104463	Pyrenophora triticirepentis	34.28	5.00e-43	168.00
IUUC-Sce-106373	Saccharomyces cerevisiae	30.16	3.00e-42	166.00
IUUC-Sha-106887	Sarcophilus harrisii	87.66	1.00e-171	595.00
IUUC-Sja-107795	Schizosaccharomyces japonicus	31.31	2.00e-43	169.00
IUUC-Spo-108216	Schizosaccharomyces pombe	33.33	2.00e-45	176.00
IUUC-Ssl-108661	Sclerotinia sclerotiorum	35.24	4.00e-44	171.00
IUUC-Smo-109680	Selaginella moellendorffii	48.01	1.00e-78	286.00
IUUC-Sit-110327	Setaria italica	42.90	2.00e-70	259.00
IUUC-Sly-111794	Solanum lycopersicum	43.67	9.00e-74	270.00
IUUC-Stu-112137	Solanum tuberosum	43.67	4.00e-74	271.00
IUUC-Sar-113164	Sorex araneus	87.94	3.00e-168	583.00
IUUC-Sbi-114484	Sorghum bicolor	43.28	3.00e-73	268.00
IUUC-Sre-114949	Sporisorium reilianum	35.19	6.00e-54	204.00
IUUC-Ssc-116090	Sus scrofa	93.56	6.00e-168	582.00
IUUC-Tgu-116617	Taeniopygia guttata	83.83	5.00e-158	550.00
IUUC-Tru-118094	Takifugu rubripes	58.86	2.00e-108	385.00
IUUC-Tsy-118792	Tarsius syrichta	91.77	7.00e-179	619.00
IUUC-Tca-121170	Theobroma cacao	45.51	1.00e-70	259.00
IUUC-Tre-122029	Trichoderma reesei	34.96	3.00e-53	202.00
IUUC-Tvi-122286	Trichoderma virens	34.67	2.00e-54	206.00
IUUC-Tae-123206	Triticum aestivum	45.33	2.00e-76	278.00
IUUC-Tme-127139	Tuber melanosporum	38.68	4.00e-52	198.00
IUUC-Tbe-127809	Tupaia belangeri	71.68	3.00e-108	384.00
IUUC-Ttr-128258	Tursiops truncatus	89.12	4.00e-156	543.00
IUUC-Uma-129560	Ustilago maydis	34.01	5.00e-53	201.00
IUUC-Vda-129997	Verticillium dahliae	35.19	2.00e-51	196.00
IUUC-Vpa-130088	Vicugna pacos	88.92	4.00e-171	593.00
IUUC-Vvi-131333	Vitis vinifera	45.18	9.00e-76	277.00
IUUC-Xtr-132344	Xenopus tropicalis	74.39	1.00e-73	268.00
IUUC-Xma-133170	Xiphophorus maculatus	69.31	6.00e-86	309.00
IUUC-Yli-134347	Yarrowia lipolytica	32.29	1.00e-48	187.00
IUUC-Zma-135332	Zea mays	43.89	6.00e-74	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence