iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026392

Ensembl Protein ID

ELA23729

UniProt Accession

L2FBG4; L2FBG4_COLGN

Genbank Protein ID

ELA23729.1

Protein Name

Transcription initiation factor tfiid

Genbank Nucleotide ID

KB021354

Gene Name

CGGC5_14618

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_14618	ELA23729	ELA23729

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-31	106.6	561	601
UBD/Beta-Prp	3.90e-56	190.0	487	680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGs..dDgtikvWDlrtgvllk 37
           gH +s++++a+ ++ t++ ++s   D+++++W++ tg +++
   Q: 561  GHDSSISAVAWhPNgTYVFTASdeTDKSVRMWSVVTGQCVR 601
           8***********777*******8899************986 PP

UBD/Beta-Prp

   S: 60   fspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGs..lD 158
           ++ ++k+l+++s D+t+++w+l+   cv ++kgh+  vl  s+sp g+++++G++d+t+r+w  ++ +  + +l ghd++++ v++hp+g +++++s  +D
   Q: 487  IETSSKLLLSSSADGTVRIWSLDIWACVCVFKGHDGPVLRASWSPHGHYFLTGGWDKTARIWMQDHASAQR-ILVGHDSSISAVAWHPNGTYVFTASdeTD 586
           556778********************************************************666666666.************************95569 PP
   S: 159  rtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlr 252
           + vr+W++ tg+++r ++g htd++ sl+  +ngk l+s+++ g + +wd+q+g  +++ +gh    ++s+ fs +++ lvsg++Dgs+r+Wd++
   Q: 587  KSVRMWSVVTGQCVRVFSG-HTDYISSLECAPNGKILASADNSGNIFFWDIQKGARIKRSRGHGkGGIWSMSFSVESNVLVSGGQDGSVRVWDVE 680
           ******************9.******************************************96479**************************87 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MSANAGQTGA GAPPGGAPNA GGAPGTYQQP ASTTPGAAAP PVSTTPIPPP ATTPAPAPAP 60
AAAPMSNQNL NQIVTDYLLK RGYTRTETIF RQESSHLGPD GRPIHNKVDD LGPKKYLKAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCCA ATGCCGGTCA GACGGGAGCA GGAGCCCCTC CAGGAGGAGC TCCAAACGCT 60
GGAGGCGCGC CGGGTACCTA CCAGCAACCT GCATCTACAA CACCAGGCGC CGCAGCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR002469--Peptidase_S9B_N
IPR007582--TFIID_NTD2
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000124--C:SAGA complex
GO:0046695--C:SLIK (SAGA-like) complex
GO:0005669--C:transcription factor TFIID complex
GO:0003682--F:chromatin binding
GO:0003743--F:translation initiation factor activity
GO:0016573--P:histone acetylation
GO:0006366--P:transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	39.18	2.00e-41	162.00
IUUC-Aml-001607	Ailuropoda melanoleuca	28.89	4.00e-73	267.00
IUUC-Atr-003136	Amborella trichopoda	31.35	2.00e-55	208.00
IUUC-Apl-004193	Anas platyrhynchos	28.15	6.00e-70	256.00
IUUC-Aca-004522	Anolis carolinensis	27.65	6.00e-72	263.00
IUUC-Aly-006476	Arabidopsis lyrata	28.63	5.00e-69	253.00
IUUC-Ath-006587	Arabidopsis thaliana	28.10	3.00e-67	248.00
IUUC-Ago-007736	Ashbya gossypii	41.33	2.00e-87	315.00
IUUC-Acl-008092	Aspergillus clavatus	50.07	0.00e+00	673.00
IUUC-Afl-008659	Aspergillus flavus	50.69	0.00e+00	685.00
IUUC-Afu-008902	Aspergillus fumigatus	50.21	0.00e+00	667.00
IUUC-Ani-009462	Aspergillus nidulans	48.50	6.00e-160	555.00
IUUC-Aor-010083	Aspergillus oryzae	50.56	0.00e+00	683.00
IUUC-Ate-010271	Aspergillus terreus	50.35	0.00e+00	672.00
IUUC-Ame-010721	Astyanax mexicanus	29.26	2.00e-72	265.00
IUUC-Bgr-012257	Blumeria graminis	52.42	0.00e+00	718.00
IUUC-Bta-013539	Bos taurus	28.89	7.00e-73	266.00
IUUC-Bci-013737	Botrytis cinerea	55.52	0.00e+00	810.00
IUUC-Bdi-015041	Brachypodium distachyon	34.98	5.00e-46	177.00
IUUC-Bol-015483	Brassica oleracea	28.19	2.00e-67	248.00
IUUC-Bra-017147	Brassica rapa	28.06	2.00e-67	248.00
IUUC-Cel-018451	Caenorhabditis elegans	22.15	6.00e-38	150.00
IUUC-Cja-018881	Callithrix jacchus	28.89	8.00e-73	266.00
IUUC-Cfa-020056	Canis familiaris	28.59	4.00e-73	267.00
IUUC-Cpo-021454	Cavia porcellus	28.59	2.00e-74	271.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	28.92	3.00e-32	130.00
IUUC-Csa-023045	Chlorocebus sabaeus	28.87	6.00e-72	263.00
IUUC-Cho-024284	Choloepus hoffmanni	33.99	2.00e-45	175.00
IUUC-Cin-025457	Ciona intestinalis	33.85	3.00e-45	173.00
IUUC-Csv-025882	Ciona savignyi	30.92	6.00e-56	210.00
IUUC-Cne-026876	Cryptococcus neoformans	30.07	8.00e-75	273.00
IUUC-Cme-027302	Cyanidioschyzon merolae	28.93	1.00e-44	172.00
IUUC-Dre-027980	Danio rerio	28.92	3.00e-71	261.00
IUUC-Dno-028863	Dasypus novemcinctus	28.89	6.00e-73	267.00
IUUC-Dor-030561	Dipodomys ordii	28.89	7.00e-73	266.00
IUUC-Dse-031547	Dothistroma septosporum	42.70	2.00e-159	554.00
IUUC-Dme-031917	Drosophila melanogaster	28.92	2.00e-48	185.00
IUUC-Ete-032712	Echinops telfairi	32.14	2.00e-38	152.00
IUUC-Eca-033927	Equus caballus	28.74	5.00e-74	270.00
IUUC-Eeu-034449	Erinaceus europaeus	34.28	2.00e-56	211.00
IUUC-Fca-036325	Felis catus	28.89	5.00e-73	267.00
IUUC-Fal-036604	Ficedula albicollis	27.65	2.00e-70	258.00
IUUC-Fox-038049	Fusarium oxysporum	66.06	0.00e+00	934.00
IUUC-Fso-038302	Fusarium solani	70.50	0.00e+00	990.00
IUUC-Gmo-038832	Gadus morhua	27.74	3.00e-70	258.00
IUUC-Ggr-039878	Gaeumannomyces graminis	66.09	0.00e+00	1009.00
IUUC-Gga-041147	Gallus gallus	28.49	1.00e-71	262.00
IUUC-Gac-041373	Gasterosteus aculeatus	32.14	1.00e-62	232.00
IUUC-Gma-043817	Glycine max	27.98	4.00e-66	244.00
IUUC-Ggo-044568	Gorilla gorilla	31.56	5.00e-39	154.00
IUUC-Hsa-045971	Homo sapiens	28.89	8.00e-73	266.00
IUUC-Hvu-047695	Hordeum vulgare	30.81	5.00e-47	180.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	28.59	6.00e-73	266.00
IUUC-Kpa-049402	Komagataella pastoris	33.02	1.00e-106	379.00
IUUC-Lch-049526	Latimeria chalumnae	27.70	2.00e-64	238.00
IUUC-Lpe-051560	Leersia perrieri	34.17	8.00e-51	193.00
IUUC-Loc-052882	Lepisosteus oculatus	29.02	4.00e-72	264.00
IUUC-Lma-053212	Leptosphaeria maculans	45.59	9.00e-148	515.00
IUUC-Laf-053859	Loxodonta africana	28.59	5.00e-73	267.00
IUUC-Mcc-054957	Macaca mulatta	31.71	2.00e-61	228.00
IUUC-Meu-056182	Macropus eugenii	31.97	4.00e-38	150.00
IUUC-Mor-057024	Magnaporthe oryzae	67.76	0.00e+00	979.00
IUUC-Mpo-057520	Magnaporthe poae	66.81	0.00e+00	952.00
IUUC-Mtr-058754	Medicago truncatula	27.96	9.00e-72	263.00
IUUC-Mla-058881	Melampsora laricipopulina	32.68	9.00e-61	226.00
IUUC-Mga-059776	Meleagris gallopavo	28.49	2.00e-72	265.00
IUUC-Mvi-060208	Microbotryum violaceum	30.36	8.00e-73	266.00
IUUC-Mmr-061783	Microcebus murinus	31.71	2.00e-61	228.00
IUUC-Mdo-062856	Monodelphis domestica	28.74	1.00e-72	266.00
IUUC-Mmu-064218	Mus musculus	28.59	5.00e-73	267.00
IUUC-Mac-064886	Musa acuminata	34.75	9.00e-43	166.00
IUUC-Mpu-065735	Mustela putorius furo	28.59	6.00e-73	266.00
IUUC-Mlu-067544	Myotis lucifugus	28.84	2.00e-71	261.00
IUUC-Nfi-068502	Neosartorya fischeri	50.21	0.00e+00	667.00
IUUC-Ncr-068891	Neurospora crassa	72.96	0.00e+00	965.00
IUUC-Nle-069389	Nomascus leucogenys	28.89	6.00e-73	267.00
IUUC-Opr-071042	Ochotona princeps	35.38	4.00e-49	187.00
IUUC-Ont-071455	Oreochromis niloticus	32.29	5.00e-63	234.00
IUUC-Oan-073181	Ornithorhynchus anatinus	29.03	8.00e-72	263.00
IUUC-Ocu-073758	Oryctolagus cuniculus	28.74	2.00e-74	271.00
IUUC-Oba-075739	Oryza barthii	33.74	3.00e-45	174.00
IUUC-Obr-076111	Oryza brachyantha	31.64	7.00e-55	206.00
IUUC-Ogl-077914	Oryza glaberrima	32.01	1.00e-44	172.00
IUUC-Ogu-078190	Oryza glumaepatula	34.59	3.00e-47	181.00
IUUC-Oin-079473	Oryza indica	33.14	3.00e-47	181.00
IUUC-Olo-080557	Oryza longistaminata	33.46	1.00e-42	166.00
IUUC-Ome-081831	Oryza meridionalis	41.57	2.00e-40	158.00
IUUC-Oni-082441	Oryza nivara	41.57	3.00e-40	158.00
IUUC-Opu-083239	Oryza punctata	38.52	1.00e-40	159.00
IUUC-Oru-085154	Oryza rufipogon	34.59	8.00e-47	179.00
IUUC-Osa-086189	Oryza sativa	33.14	3.00e-47	181.00
IUUC-Ola-086574	Oryzias latipes	28.53	7.00e-72	263.00
IUUC-Olu-087616	Ostreococcus lucimarinus	34.02	7.00e-54	203.00
IUUC-Oga-088827	Otolemur garnettii	28.59	5.00e-73	267.00
IUUC-Oar-089648	Ovis aries	28.89	7.00e-73	266.00
IUUC-Ptr-091195	Pan troglodytes	28.89	6.00e-73	266.00
IUUC-Pan-091978	Papio anubis	28.89	7.00e-73	266.00
IUUC-Psi-093598	Pelodiscus sinensis	28.06	4.00e-64	237.00
IUUC-Pma-094593	Petromyzon marinus	32.25	2.00e-34	138.00
IUUC-Pno-094823	Phaeosphaeria nodorum	45.47	7.00e-150	522.00
IUUC-Ppa-095455	Physcomitrella patens	28.21	2.00e-66	245.00
IUUC-Pfo-097120	Poecilia formosa	32.37	1.00e-62	233.00
IUUC-Pab-098771	Pongo abelii	28.89	6.00e-73	266.00
IUUC-Pop-099542	Populus trichocarpa	29.51	6.00e-70	256.00
IUUC-Pca-100727	Procavia capensis	31.67	2.00e-40	158.00
IUUC-Ppe-101686	Prunus persica	27.84	3.00e-66	244.00
IUUC-Pva-102414	Pteropus vampyrus	26.85	1.00e-56	213.00
IUUC-Pgr-103603	Puccinia graminis	28.16	7.00e-70	256.00
IUUC-Ptt-103995	Puccinia triticina	32.51	1.00e-51	196.00
IUUC-Pte-104359	Pyrenophora teres	45.39	2.00e-159	554.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	46.01	3.00e-157	547.00
IUUC-Rno-105064	Rattus norvegicus	28.59	3.00e-73	268.00
IUUC-Sce-106186	Saccharomyces cerevisiae	31.64	5.00e-106	377.00
IUUC-Sha-106582	Sarcophilus harrisii	29.18	5.00e-73	267.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	34.46	4.00e-112	397.00
IUUC-Spo-108142	Schizosaccharomyces pombe	34.51	5.00e-112	396.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	56.03	0.00e+00	791.00
IUUC-Smo-109111	Selaginella moellendorffii	36.96	7.00e-55	206.00
IUUC-Sit-109804	Setaria italica	30.11	3.00e-48	184.00
IUUC-Sly-111693	Solanum lycopersicum	28.23	1.00e-64	239.00
IUUC-Sar-113381	Sorex araneus	32.15	3.00e-42	164.00
IUUC-Sbi-114849	Sorghum bicolor	34.59	2.00e-46	179.00
IUUC-Sre-114945	Sporisorium reilianum	31.92	2.00e-58	219.00
IUUC-Ssc-115582	Sus scrofa	31.15	3.00e-56	211.00
IUUC-Tgu-116899	Taeniopygia guttata	27.79	1.00e-70	259.00
IUUC-Tru-118011	Takifugu rubripes	31.40	9.00e-61	226.00
IUUC-Tsy-119622	Tarsius syrichta	25.81	1.00e-24	106.00
IUUC-Tni-120598	Tetraodon nigroviridis	31.94	1.00e-61	229.00
IUUC-Tca-121247	Theobroma cacao	31.69	4.00e-54	204.00
IUUC-Tre-121949	Trichoderma reesei	66.25	0.00e+00	930.00
IUUC-Tvi-122626	Trichoderma virens	67.09	0.00e+00	976.00
IUUC-Tae-123335	Triticum aestivum	30.56	6.00e-49	187.00
IUUC-Tur-126005	Triticum urartu	27.89	1.00e-43	169.00
IUUC-Tme-126904	Tuber melanosporum	37.74	4.00e-123	433.00
IUUC-Tbe-127254	Tupaia belangeri	26.42	2.00e-56	212.00
IUUC-Ttr-128544	Tursiops truncatus	28.89	7.00e-73	266.00
IUUC-Uma-129379	Ustilago maydis	31.65	7.00e-60	224.00
IUUC-Vda-129761	Verticillium dahliae	74.23	0.00e+00	1045.00
IUUC-Vpa-130485	Vicugna pacos	28.89	5.00e-73	267.00
IUUC-Vvi-131171	Vitis vinifera	27.24	5.00e-67	247.00
IUUC-Xtr-132762	Xenopus tropicalis	24.20	1.00e-41	163.00
IUUC-Xma-133583	Xiphophorus maculatus	32.14	4.00e-62	231.00
IUUC-Yli-134446	Yarrowia lipolytica	37.18	1.00e-113	402.00
IUUC-Zma-135722	Zea mays	34.30	2.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence