iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132006

Ensembl Protein ID

ENSXETP00000047258.3

UniProt Accession

F6TWJ4; F6TWJ4_XENTR

Genbank Protein ID

ENSXETP00000047258

Protein Name

DDB1 and CUL4-associated factor 4

Genbank Nucleotide ID

AAMC01063548

Gene Name

dcaf4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000021849.3	ENSXETT00000047258.3	ENSXETP00000047258.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-07	30.4	310	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           ++ +t+l++ +d ++l ++   g+ik+WD+r ++++k
   Q: 310  NSAITSLRLlQDeNYLMVADMSGQIKLWDVRMQKSVK 346
           788*****99888*****************9988776 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

PELPGFYFDP EKNRYFRMLP GHNNCNPLTR EGIQQKEMEC KRLQLLEEEK NRKKSGPGLN 60
SALLLRKRQL GLVPFTTYCR RIHEMKVSCM QRKVVHINSP EREGGRARRF EFIMADSAYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAGAGCTTC CAGGGTTTTA CTTTGACCCA GAAAAAAATC GCTACTTTCG CATGCTCCCA 60
GGACACAACA ATTGCAACCC TCTGACACGG GAAGGCATAC AACAAAAGGA AATGGAGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	44.74	3.00e-12	65.10
IUUC-Aml-001929	Ailuropoda melanoleuca	49.77	2.00e-115	408.00
IUUC-Atr-002556	Amborella trichopoda	41.46	5.00e-11	62.40
IUUC-Apl-003177	Anas platyrhynchos	55.00	2.00e-133	469.00
IUUC-Aca-004610	Anolis carolinensis	54.34	9.00e-136	476.00
IUUC-Aly-005883	Arabidopsis lyrata	26.54	3.00e-12	66.20
IUUC-Ath-006668	Arabidopsis thaliana	25.81	4.00e-13	69.70
IUUC-Ame-010690	Astyanax mexicanus	51.72	3.00e-117	415.00
IUUC-Bta-012668	Bos taurus	47.26	3.00e-102	365.00
IUUC-Bdi-014848	Brachypodium distachyon	46.15	5.00e-11	62.40
IUUC-Bol-016035	Brassica oleracea	26.17	2.00e-13	70.10
IUUC-Bra-016687	Brassica rapa	27.10	9.00e-13	68.20
IUUC-Cja-019560	Callithrix jacchus	56.10	2.00e-50	191.00
IUUC-Cfa-020441	Canis familiaris	49.32	2.00e-112	399.00
IUUC-Cpo-021299	Cavia porcellus	50.57	9.00e-123	433.00
IUUC-Csa-023185	Chlorocebus sabaeus	50.34	9.00e-123	433.00
IUUC-Cho-024353	Choloepus hoffmanni	50.00	2.00e-121	429.00
IUUC-Dno-029890	Dasypus novemcinctus	49.54	1.00e-120	426.00
IUUC-Dor-030618	Dipodomys ordii	54.14	1.00e-45	177.00
IUUC-Ete-032557	Echinops telfairi	38.29	1.00e-56	213.00
IUUC-Eca-033466	Equus caballus	49.09	2.00e-117	416.00
IUUC-Eeu-034995	Erinaceus europaeus	39.83	2.00e-67	248.00
IUUC-Fca-036199	Felis catus	48.40	5.00e-110	390.00
IUUC-Fal-036717	Ficedula albicollis	55.48	7.00e-133	467.00
IUUC-Gmo-039201	Gadus morhua	52.28	3.00e-123	435.00
IUUC-Gga-040398	Gallus gallus	54.46	7.00e-123	433.00
IUUC-Gac-042391	Gasterosteus aculeatus	51.71	1.00e-126	446.00
IUUC-Gma-042906	Glycine max	25.14	2.00e-10	60.50
IUUC-Ggo-045348	Gorilla gorilla	51.03	1.00e-124	439.00
IUUC-Hsa-046746	Homo sapiens	51.03	1.00e-124	439.00
IUUC-Hvu-047825	Hordeum vulgare	44.74	6.00e-12	65.10
IUUC-Itr-048472	Ictidomys tridecemlineatus	48.05	8.00e-114	403.00
IUUC-Lch-050272	Latimeria chalumnae	48.17	5.00e-108	384.00
IUUC-Lpe-051618	Leersia perrieri	31.85	9.00e-11	61.60
IUUC-Loc-051772	Lepisosteus oculatus	51.61	2.00e-127	449.00
IUUC-Laf-054577	Loxodonta africana	39.95	6.00e-88	317.00
IUUC-Mcc-055284	Macaca mulatta	43.25	2.00e-89	322.00
IUUC-Meu-056721	Macropus eugenii	49.80	2.00e-60	226.00
IUUC-Mtr-058472	Medicago truncatula	30.22	5.00e-13	68.90
IUUC-Mga-059238	Meleagris gallopavo	54.55	6.00e-124	437.00
IUUC-Mmr-061642	Microcebus murinus	45.38	3.00e-94	338.00
IUUC-Mdo-062030	Monodelphis domestica	55.48	9.00e-128	450.00
IUUC-Mmu-063420	Mus musculus	51.47	2.00e-128	452.00
IUUC-Mac-065231	Musa acuminata	29.55	6.00e-16	78.60
IUUC-Mpu-065692	Mustela putorius furo	49.20	8.00e-113	400.00
IUUC-Mlu-067428	Myotis lucifugus	50.11	6.00e-123	434.00
IUUC-Nle-070145	Nomascus leucogenys	50.34	4.00e-123	434.00
IUUC-Opr-071081	Ochotona princeps	49.54	1.00e-107	383.00
IUUC-Ont-071302	Oreochromis niloticus	52.51	1.00e-122	433.00
IUUC-Oan-073494	Ornithorhynchus anatinus	46.19	2.00e-85	309.00
IUUC-Ocu-073925	Oryctolagus cuniculus	49.43	3.00e-116	412.00
IUUC-Oba-075797	Oryza barthii	34.07	4.00e-10	59.30
IUUC-Obr-076014	Oryza brachyantha	34.07	4.00e-11	62.80
IUUC-Ogl-077201	Oryza glaberrima	34.07	5.00e-10	58.90
IUUC-Ogu-078056	Oryza glumaepatula	34.07	4.00e-10	59.30
IUUC-Oin-080062	Oryza indica	32.59	4.00e-10	59.70
IUUC-Olo-080869	Oryza longistaminata	34.07	1.00e-09	58.90
IUUC-Ome-081820	Oryza meridionalis	32.59	2.00e-10	60.10
IUUC-Oni-082497	Oryza nivara	34.07	4.00e-10	59.30
IUUC-Opu-083780	Oryza punctata	32.09	4.00e-11	63.90
IUUC-Oru-085091	Oryza rufipogon	32.59	4.00e-10	59.70
IUUC-Osa-085725	Oryza sativa	32.59	4.00e-10	59.70
IUUC-Ola-087033	Oryzias latipes	52.39	5.00e-114	404.00
IUUC-Oga-088861	Otolemur garnettii	48.40	2.00e-114	405.00
IUUC-Oar-090048	Ovis aries	48.17	4.00e-108	384.00
IUUC-Ptr-091658	Pan troglodytes	50.80	9.00e-124	436.00
IUUC-Pan-092873	Papio anubis	49.89	5.00e-122	431.00
IUUC-Psi-093421	Pelodiscus sinensis	54.85	7.00e-125	440.00
IUUC-Pma-094216	Petromyzon marinus	40.68	3.00e-74	272.00
IUUC-Ppa-095186	Physcomitrella patens	47.95	5.00e-11	62.40
IUUC-Pfo-096178	Poecilia formosa	51.60	2.00e-112	399.00
IUUC-Pab-098037	Pongo abelii	42.50	2.00e-80	292.00
IUUC-Pop-099334	Populus trichocarpa	41.46	1.00e-11	62.80
IUUC-Pca-100845	Procavia capensis	43.45	7.00e-104	370.00
IUUC-Pva-103203	Pteropus vampyrus	49.32	2.00e-119	422.00
IUUC-Rno-105675	Rattus norvegicus	49.32	8.00e-115	407.00
IUUC-Sha-107389	Sarcophilus harrisii	55.84	3.00e-133	468.00
IUUC-Sja-107847	Schizosaccharomyces japonicus	22.69	4.00e-10	58.90
IUUC-Sit-110421	Setaria italica	41.86	3.00e-13	69.30
IUUC-Sly-110888	Solanum lycopersicum	21.90	2.00e-08	53.90
IUUC-Sar-113185	Sorex araneus	37.70	6.00e-79	287.00
IUUC-Sbi-114182	Sorghum bicolor	42.11	7.00e-13	66.60
IUUC-Ssc-116005	Sus scrofa	50.46	1.00e-123	436.00
IUUC-Tgu-117023	Taeniopygia guttata	54.11	5.00e-129	454.00
IUUC-Tru-118221	Takifugu rubripes	51.94	5.00e-121	427.00
IUUC-Tsy-118784	Tarsius syrichta	42.75	1.00e-88	319.00
IUUC-Tni-120072	Tetraodon nigroviridis	51.71	4.00e-120	424.00
IUUC-Tca-121267	Theobroma cacao	21.86	1.00e-13	70.90
IUUC-Tae-124900	Triticum aestivum	44.74	5.00e-12	64.70
IUUC-Tur-126655	Triticum urartu	44.74	5.00e-12	65.10
IUUC-Tbe-127243	Tupaia belangeri	45.56	8.00e-100	357.00
IUUC-Ttr-129237	Tursiops truncatus	45.00	1.00e-91	330.00
IUUC-Vvi-131184	Vitis vinifera	22.01	6.00e-09	55.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence