iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112531

Ensembl Protein ID

PGSC0003DMT400073081

UniProt Accession

M1CRH8; M1CRH8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400028425	PGSC0003DMT400073081	PGSC0003DMT400073081

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-14	54.9	286	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDl 30
           gHt+ v+c+ f    +  ++++sG++D ++kvWD+
   Q: 286  GHTAAVSCVTFstfgDKgKFIISGGNDRQVKVWDW 320
           8**********999633799**************7 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEEPRKLKGH KASTTCCIAS QNRPGLIATA DEDGCVCWFD LRCKDKIFTM DVGNGNPVSS 60
ICFKPGNEDV VYVSLGSEVK CFDVNMVTAS KLLHSYNYNK DEINQIACSS KSSFLAAADD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTACTGGT AGAGTCAAGA GCGAGCAGAG TAGAATGGAG GAACCAAGAA AACTCAAAGG 60
TCACAAAGCC AGCACCACTT GCTGTATCGC CTCTCAAAAC CGCCCTGGTC TTATTGCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	52.69	6.00e-96	343.00
IUUC-Aml-001203	Ailuropoda melanoleuca	25.44	4.00e-27	114.00
IUUC-Atr-002680	Amborella trichopoda	56.45	1.00e-95	342.00
IUUC-Apl-003656	Anas platyrhynchos	26.45	1.00e-21	95.90
IUUC-Aca-004987	Anolis carolinensis	27.30	2.00e-25	108.00
IUUC-Aly-006254	Arabidopsis lyrata	60.00	2.00e-125	440.00
IUUC-Ath-006632	Arabidopsis thaliana	59.20	4.00e-125	439.00
IUUC-Ame-011032	Astyanax mexicanus	27.49	2.00e-27	115.00
IUUC-Bta-012588	Bos taurus	25.99	5.00e-26	110.00
IUUC-Bdi-014532	Brachypodium distachyon	54.76	5.00e-105	373.00
IUUC-Bol-015542	Brassica oleracea	55.26	9.00e-110	390.00
IUUC-Bra-017046	Brassica rapa	59.39	8.00e-120	423.00
IUUC-Cja-019365	Callithrix jacchus	25.00	2.00e-25	108.00
IUUC-Cfa-021090	Canis familiaris	25.69	6.00e-28	117.00
IUUC-Cpo-021517	Cavia porcellus	23.56	7.00e-22	97.10
IUUC-Csa-023041	Chlorocebus sabaeus	24.44	9.00e-26	109.00
IUUC-Cho-024801	Choloepus hoffmanni	24.81	7.00e-26	110.00
IUUC-Dre-028437	Danio rerio	25.91	1.00e-18	85.90
IUUC-Dno-029267	Dasypus novemcinctus	25.00	2.00e-25	108.00
IUUC-Eca-033621	Equus caballus	25.50	1.00e-26	112.00
IUUC-Eeu-034461	Erinaceus europaeus	26.55	8.00e-25	106.00
IUUC-Fca-036410	Felis catus	25.56	9.00e-26	109.00
IUUC-Fal-036676	Ficedula albicollis	25.06	9.00e-23	99.80
IUUC-Gac-041905	Gasterosteus aculeatus	25.91	2.00e-26	111.00
IUUC-Gma-044017	Glycine max	59.51	1.00e-109	388.00
IUUC-Ggo-044881	Gorilla gorilla	25.00	4.00e-25	107.00
IUUC-Hsa-046836	Homo sapiens	24.50	5.00e-25	107.00
IUUC-Hvu-047651	Hordeum vulgare	55.99	1.00e-110	392.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	24.94	3.00e-26	111.00
IUUC-Lch-050406	Latimeria chalumnae	25.80	4.00e-19	87.40
IUUC-Lpe-051023	Leersia perrieri	48.04	1.00e-90	325.00
IUUC-Loc-052878	Lepisosteus oculatus	27.27	1.00e-27	116.00
IUUC-Laf-053547	Loxodonta africana	25.06	5.00e-25	107.00
IUUC-Mcc-054646	Macaca mulatta	24.44	3.00e-25	107.00
IUUC-Meu-056381	Macropus eugenii	26.90	4.00e-24	103.00
IUUC-Mtr-058656	Medicago truncatula	57.33	3.00e-111	393.00
IUUC-Mmr-061601	Microcebus murinus	25.19	6.00e-27	113.00
IUUC-Mdo-062305	Monodelphis domestica	25.56	2.00e-25	108.00
IUUC-Mmu-063213	Mus musculus	24.94	8.00e-25	106.00
IUUC-Mac-064940	Musa acuminata	57.67	4.00e-123	433.00
IUUC-Mpu-066629	Mustela putorius furo	24.75	4.00e-26	110.00
IUUC-Nle-069860	Nomascus leucogenys	24.38	7.00e-25	106.00
IUUC-Opr-071180	Ochotona princeps	25.84	6.00e-15	73.90
IUUC-Ont-071912	Oreochromis niloticus	25.94	2.00e-24	105.00
IUUC-Ocu-074874	Oryctolagus cuniculus	23.94	3.00e-24	104.00
IUUC-Oba-075815	Oryza barthii	50.53	3.00e-87	313.00
IUUC-Obr-076835	Oryza brachyantha	56.88	4.00e-83	300.00
IUUC-Ogu-077977	Oryza glumaepatula	49.21	2.00e-85	308.00
IUUC-Oin-079206	Oryza indica	56.30	2.00e-110	390.00
IUUC-Olo-080621	Oryza longistaminata	51.34	7.00e-91	326.00
IUUC-Ome-081261	Oryza meridionalis	50.13	1.00e-85	308.00
IUUC-Oni-082280	Oryza nivara	41.24	2.00e-37	148.00
IUUC-Opu-083256	Oryza punctata	48.45	2.00e-86	311.00
IUUC-Oru-084531	Oryza rufipogon	47.99	2.00e-78	284.00
IUUC-Osa-085892	Oryza sativa	56.30	2.00e-110	390.00
IUUC-Ola-086701	Oryzias latipes	27.16	2.00e-25	108.00
IUUC-Olu-087593	Ostreococcus lucimarinus	27.53	4.00e-13	67.80
IUUC-Oga-088152	Otolemur garnettii	25.00	6.00e-26	110.00
IUUC-Oar-089681	Ovis aries	25.37	2.00e-27	115.00
IUUC-Ptr-091142	Pan troglodytes	24.50	8.00e-25	106.00
IUUC-Pan-092435	Papio anubis	24.23	3.00e-24	104.00
IUUC-Psi-093255	Pelodiscus sinensis	30.09	2.00e-24	105.00
IUUC-Ppa-095829	Physcomitrella patens	43.77	5.00e-74	270.00
IUUC-Pfo-097339	Poecilia formosa	28.40	1.00e-24	105.00
IUUC-Pab-098274	Pongo abelii	24.75	2.00e-24	105.00
IUUC-Pop-099705	Populus trichocarpa	58.31	1.00e-118	418.00
IUUC-Pca-100451	Procavia capensis	25.06	1.00e-23	102.00
IUUC-Ppe-101220	Prunus persica	61.80	2.00e-136	477.00
IUUC-Pva-102385	Pteropus vampyrus	24.50	3.00e-25	108.00
IUUC-Rno-105765	Rattus norvegicus	25.44	1.00e-24	105.00
IUUC-Sha-106533	Sarcophilus harrisii	25.62	8.00e-25	106.00
IUUC-Smo-109248	Selaginella moellendorffii	40.37	2.00e-71	261.00
IUUC-Sit-110297	Setaria italica	57.82	7.00e-80	289.00
IUUC-Sly-111617	Solanum lycopersicum	97.86	0.00e+00	667.00
IUUC-Sar-113647	Sorex araneus	24.81	3.00e-25	107.00
IUUC-Sbi-114621	Sorghum bicolor	57.87	1.00e-120	425.00
IUUC-Tgu-116482	Taeniopygia guttata	26.50	2.00e-17	82.00
IUUC-Tru-118622	Takifugu rubripes	25.37	2.00e-21	95.10
IUUC-Tsy-119474	Tarsius syrichta	24.75	1.00e-24	105.00
IUUC-Tni-120250	Tetraodon nigroviridis	24.32	1.00e-13	69.70
IUUC-Tca-121583	Theobroma cacao	60.48	5.00e-131	459.00
IUUC-Tae-123764	Triticum aestivum	56.77	8.00e-113	399.00
IUUC-Tur-126076	Triticum urartu	48.73	1.00e-88	318.00
IUUC-Tbe-127545	Tupaia belangeri	25.19	2.00e-26	111.00
IUUC-Ttr-128497	Tursiops truncatus	25.19	2.00e-27	115.00
IUUC-Vpa-130772	Vicugna pacos	24.44	1.00e-25	109.00
IUUC-Vvi-131632	Vitis vinifera	68.27	3.00e-145	506.00
IUUC-Xma-133432	Xiphophorus maculatus	26.65	7.00e-27	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence