iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007562

UUCD1 version

UUC-ArT-00025

Ensembl Protein ID

AT2G17310.1

UniProt Accession

Q8LL17; SON1_ARATH

Genbank Protein ID

AAM89220.1; AEC06612.1; AT2G17310.1

Protein Name

Protein SUPPRESSOR OF NIM1 1

Genbank Nucleotide ID

AF472589; CP002685; BX821299

Gene Name

SON1; At2g17310; F5J6.7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G17310	AT2G17310.1	AT2G17310.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	17220175

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	0.1	13.5	2	41

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 105  rlpeeilveilklldkeellraarvcrrwqelasqkalwk 144
            lp+e+   il++l++ +l+r++ v+++w+ l ++k++++
   Q: 2    ALPWELEEDILSRLPPISLVRFRTVSKHWNSLFNDKTFIN 41
           69****************************9998776665 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Regulates negatively a plant defense signaling pathway which is independent of salicylic acid (SA) and systemic acquired resistance (SAR). Confers sensitivity to P.syringae and P.parasitica.

Protein Sequence
(Fasta)

MALPWELEED ILSRLPPISL VRFRTVSKHW NSLFNDKTFI NNHLSRSRPE FIILTNSKIY 60
SVDIIDHNNI DPTIRLHEIP TYDIHSRGTD LNRTIINTCD EFLFYNYRYW DNMTALWNPW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAGAACAG AAAACCTCAT GGCTCTTCCG TGGGAGTTGG AGGAAGACAT ACTCTCTCGT 60
CTGCCACCTA TATCTCTTGT TCGATTCAGA ACCGTGTCTA AACACTGGAA CTCTCTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0611--Plant defense
KW-1185--Reference proteome

Interpro

IPR006527--F-box-assoc_dom_typ1
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom
IPR011043--Gal_Oxase/kelch_b-propeller

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF07734--FBA_1

SMART

SM00256--FBOX

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006952--P:defense response
GO:0016567--P:protein ubiquitination
GO:0009617--P:response to bacterium
GO:0009620--P:response to fungus
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G17310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005893	Arabidopsis lyrata	86.60	0.00e+00	644.00
IUUC-Ame-011938	Astyanax mexicanus	21.60	9.00e-03	33.50
IUUC-Bol-016010	Brassica oleracea	53.69	2.00e-106	378.00
IUUC-Bra-016666	Brassica rapa	37.35	3.00e-47	181.00
IUUC-Cgl-026462	Colletotrichum gloeosporioides	36.84	1.10e-01	30.80
IUUC-Laf-054379	Loxodonta africana	28.57	1.30e-02	32.70
IUUC-Opr-070811	Ochotona princeps	37.50	1.30e-02	32.70
IUUC-Ptr-090547	Pan troglodytes	26.88	8.30e-02	30.80
IUUC-Psi-093649	Pelodiscus sinensis	28.95	4.90e-02	30.40
IUUC-Pfo-096928	Poecilia formosa	25.97	1.50e-02	32.70
IUUC-Pte-104157	Pyrenophora teres	30.14	5.30e-02	32.00
IUUC-Pyt-104664	Pyrenophora triticirepentis	50.00	1.10e-01	30.00
IUUC-Sha-106479	Sarcophilus harrisii	37.78	3.10e-02	30.80
IUUC-Tae-124863	Triticum aestivum	26.45	6.00e-12	64.30
IUUC-Xtr-132365	Xenopus tropicalis	23.94	4.70e-02	31.20

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence