iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050035

Ensembl Protein ID

ENSLACP00000010796.1

UniProt Accession

H3AMC5; H3AMC5_LATCH

Genbank Protein ID

ENSLACP00000010796

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01184117

Gene Name

NUP43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000009506.1	ENSLACT00000010876.1	ENSLACP00000010796.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-18	65.9	214	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd..tllvsGsdDgtikvWDlrtgvl 35
            +c++  ++  +++++G+ Dgt+ +WD+r g  
   Q: 214  LYCVDRhPNqqHIIATGGQDGTLSIWDVRHGSM 246
           56776564445789**************98865 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MEQNYAKFVS QKISKTCWRP VSATTLQQPD VFATGSWDNE ENKVSLWTIG DYGSSGMEED 60
YEGDPQLLCE IVHVGDVMDL QFLDQERIIS ASSTGTVTIF RHNQNNQRFS INQQWKRAHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGATTGG CGGGCATTTC AGCAAAGCAT GCCGGGAAGA ATCGGTTGTT GTGTTTCTCC 60
GGCACTTTAA TTGGACGGAA AGACTGACTT TTGTTTTATT ATTATTATTA AAGCAGTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

lcm:102347747

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	69.58	2.00e-155	541.00
IUUC-Atr-002526	Amborella trichopoda	27.44	4.00e-10	58.50
IUUC-Apl-003533	Anas platyrhynchos	71.39	3.00e-136	477.00
IUUC-Aca-004965	Anolis carolinensis	67.65	1.00e-152	532.00
IUUC-Aly-006431	Arabidopsis lyrata	29.41	9.00e-13	67.40
IUUC-Ath-007253	Arabidopsis thaliana	29.59	1.00e-12	67.00
IUUC-Ame-011694	Astyanax mexicanus	66.56	4.00e-129	453.00
IUUC-Bta-013161	Bos taurus	71.96	3.00e-163	567.00
IUUC-Bdi-014758	Brachypodium distachyon	26.92	1.00e-11	63.50
IUUC-Bra-017838	Brassica rapa	26.39	3.00e-07	49.30
IUUC-Cel-018567	Caenorhabditis elegans	26.95	3.00e-09	56.20
IUUC-Cja-020000	Callithrix jacchus	60.00	5.00e-128	450.00
IUUC-Cfa-021112	Canis familiaris	71.96	2.00e-162	564.00
IUUC-Cpo-022095	Cavia porcellus	70.03	4.00e-158	550.00
IUUC-Csa-023460	Chlorocebus sabaeus	70.90	2.00e-159	555.00
IUUC-Cho-024279	Choloepus hoffmanni	71.30	3.00e-136	477.00
IUUC-Cin-025360	Ciona intestinalis	34.44	4.00e-59	221.00
IUUC-Csv-026301	Ciona savignyi	34.81	2.00e-53	201.00
IUUC-Dre-028097	Danio rerio	63.37	6.00e-144	503.00
IUUC-Dno-029131	Dasypus novemcinctus	71.96	1.00e-161	561.00
IUUC-Dor-030496	Dipodomys ordii	59.63	3.00e-129	454.00
IUUC-Dme-031834	Drosophila melanogaster	28.07	5.00e-45	174.00
IUUC-Ete-032448	Echinops telfairi	75.00	3.00e-136	477.00
IUUC-Eca-034409	Equus caballus	72.49	2.00e-165	574.00
IUUC-Eeu-035343	Erinaceus europaeus	72.38	8.00e-91	327.00
IUUC-Fca-036177	Felis catus	71.16	1.00e-160	558.00
IUUC-Fal-037657	Ficedula albicollis	67.02	1.00e-147	515.00
IUUC-Gmo-038946	Gadus morhua	68.18	1.00e-150	525.00
IUUC-Gga-041070	Gallus gallus	70.29	6.00e-152	530.00
IUUC-Gac-042442	Gasterosteus aculeatus	68.98	1.00e-154	539.00
IUUC-Gma-043812	Glycine max	25.66	6.00e-11	61.60
IUUC-Ggo-045223	Gorilla gorilla	71.16	2.00e-161	561.00
IUUC-Hsa-045956	Homo sapiens	70.90	2.00e-161	561.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	70.98	2.00e-160	558.00
IUUC-Laf-053404	Loxodonta africana	70.63	5.00e-158	550.00
IUUC-Mcc-055813	Macaca mulatta	71.16	5.00e-160	556.00
IUUC-Meu-056388	Macropus eugenii	73.33	3.00e-91	328.00
IUUC-Mga-060193	Meleagris gallopavo	68.97	9.00e-161	559.00
IUUC-Mmr-060818	Microcebus murinus	71.69	1.00e-161	562.00
IUUC-Mdo-062822	Monodelphis domestica	70.63	1.00e-159	555.00
IUUC-Mmu-064182	Mus musculus	70.90	1.00e-160	558.00
IUUC-Mpu-066865	Mustela putorius furo	71.30	5.00e-144	503.00
IUUC-Mlu-067329	Myotis lucifugus	69.31	9.00e-153	532.00
IUUC-Nle-069093	Nomascus leucogenys	71.69	7.00e-162	563.00
IUUC-Opr-070481	Ochotona princeps	66.84	1.00e-145	509.00
IUUC-Ont-072445	Oreochromis niloticus	69.52	9.00e-157	546.00
IUUC-Oan-073029	Ornithorhynchus anatinus	65.78	2.00e-146	511.00
IUUC-Ocu-074275	Oryctolagus cuniculus	71.16	2.00e-160	558.00
IUUC-Ola-086862	Oryzias latipes	64.71	3.00e-141	494.00
IUUC-Oga-088952	Otolemur garnettii	72.49	3.00e-163	567.00
IUUC-Oar-089300	Ovis aries	72.49	1.00e-164	572.00
IUUC-Ptr-091389	Pan troglodytes	71.16	1.00e-161	562.00
IUUC-Pan-092174	Papio anubis	71.16	9.00e-160	556.00
IUUC-Psi-093326	Pelodiscus sinensis	72.57	4.00e-149	520.00
IUUC-Pfo-096331	Poecilia formosa	70.19	5.00e-158	550.00
IUUC-Pab-098306	Pongo abelii	71.16	2.00e-161	561.00
IUUC-Pca-100455	Procavia capensis	67.33	1.00e-55	209.00
IUUC-Ppe-101380	Prunus persica	27.53	3.00e-11	62.80
IUUC-Pva-102578	Pteropus vampyrus	70.11	2.00e-156	545.00
IUUC-Rno-105146	Rattus norvegicus	69.84	3.00e-153	534.00
IUUC-Sha-107640	Sarcophilus harrisii	70.98	2.00e-159	555.00
IUUC-Sar-113681	Sorex araneus	73.20	9.00e-84	303.00
IUUC-Sbi-113809	Sorghum bicolor	27.45	3.00e-05	42.40
IUUC-Ssc-116129	Sus scrofa	70.37	2.00e-158	551.00
IUUC-Tgu-117456	Taeniopygia guttata	68.87	1.00e-80	292.00
IUUC-Tru-117630	Takifugu rubripes	68.67	6.00e-101	359.00
IUUC-Tsy-119331	Tarsius syrichta	71.43	1.00e-163	568.00
IUUC-Tni-120077	Tetraodon nigroviridis	66.31	4.00e-143	500.00
IUUC-Tca-121814	Theobroma cacao	28.32	1.00e-08	53.90
IUUC-Tae-123605	Triticum aestivum	26.92	6.00e-11	61.60
IUUC-Tbe-127359	Tupaia belangeri	63.64	7.00e-136	476.00
IUUC-Ttr-128461	Tursiops truncatus	71.96	3.00e-158	551.00
IUUC-Vpa-130162	Vicugna pacos	70.11	4.00e-157	547.00
IUUC-Vvi-131114	Vitis vinifera	28.50	2.00e-10	59.70
IUUC-Xtr-132446	Xenopus tropicalis	70.19	5.00e-162	563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence