iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012784

Ensembl Protein ID

ENSBTAP00000024164.3

UniProt Accession

E1BJT7; E1BJT7_BOVIN

Genbank Protein ID

ENSBTAP00000024164

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02031593

Gene Name

IFT172

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000018157.3	ENSBTAT00000024164.3	ENSBTAP00000024164.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.70e-06	25.9	18	44

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtllvsGsdDgtikvWD 29
           +vtc+a+  ++  +++++ D ++ ++D
   Q: 18   KVTCMAWsqNNAKFAVCTVDRVVLLYD 44
           79*****9655779************9 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MQLKHLRTLL SPQDGAAKVT CMAWSQNNAK FAVCTVDRVV LLYDEHGERR DKFSTKPADM 60
KYGRKSYMVK GMAFSPDSTK IAIGQTDNII YVYKIGEDWG DKKVICNKFI QTSAVTCLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGTTGA AGCACCTGAG GACGCTGCTG AGCCCTCAGG TGAGGAGTCG CGTGCCTCTT 60
CGCTCCCTCG CCCGCCTTAG TGTTCCAAGG AAAGTGGGGG ATTGAAGTTT GGAAACGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016024--ARM-type_fold
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0036064--C:ciliary basal body
GO:1903561--C:extracellular vesicle
GO:0030992--C:intraciliary transport particle B
GO:0097598--C:sperm cytoplasmic droplet
GO:0097225--C:sperm midpiece
GO:0097228--C:sperm principal piece
GO:0060348--P:bone development
GO:0007420--P:brain development
GO:0060271--P:cilium assembly
GO:0031122--P:cytoplasmic microtubule organization
GO:0009953--P:dorsal/ventral pattern formation
GO:0008544--P:epidermis development
GO:0001947--P:heart looping
GO:0061525--P:hindgut development
GO:0070986--P:left/right axis specification
GO:0060173--P:limb development
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0007219--P:Notch signaling pathway
GO:0060021--P:palate development
GO:0045880--P:positive regulation of smoothened signaling pathway
GO:0016485--P:protein processing
GO:0007224--P:smoothened signaling pathway
GO:0021522--P:spinal cord motor neuron differentiation

KEGG

bta:100848219

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001775	Ailuropoda melanoleuca	97.60	0.00e+00	3403.00
IUUC-Apl-004180	Anas platyrhynchos	81.07	0.00e+00	2991.00
IUUC-Cfa-020359	Canis familiaris	96.91	0.00e+00	3412.00
IUUC-Cho-024397	Choloepus hoffmanni	87.04	0.00e+00	1014.00
IUUC-Cin-025243	Ciona intestinalis	74.95	0.00e+00	793.00
IUUC-Csv-025964	Ciona savignyi	66.67	0.00e+00	1608.00
IUUC-Dno-029782	Dasypus novemcinctus	96.60	0.00e+00	2299.00
IUUC-Eca-033288	Equus caballus	98.23	0.00e+00	3437.00
IUUC-Fca-036387	Felis catus	97.26	0.00e+00	3449.00
IUUC-Hsa-046333	Homo sapiens	95.87	0.00e+00	1033.00
IUUC-Loc-052126	Lepisosteus oculatus	76.17	0.00e+00	2849.00
IUUC-Laf-054242	Loxodonta africana	98.06	0.00e+00	3436.00
IUUC-Mcc-055460	Macaca mulatta	91.34	0.00e+00	3229.00
IUUC-Meu-056864	Macropus eugenii	94.92	0.00e+00	3303.00
IUUC-Mmr-060951	Microcebus murinus	94.23	0.00e+00	3267.00
IUUC-Mdo-062290	Monodelphis domestica	96.63	0.00e+00	3378.00
IUUC-Mlu-067149	Myotis lucifugus	95.54	0.00e+00	3404.00
IUUC-Nle-069497	Nomascus leucogenys	90.74	0.00e+00	3253.00
IUUC-Opr-070642	Ochotona princeps	96.44	0.00e+00	3382.00
IUUC-Ocu-074484	Oryctolagus cuniculus	96.80	0.00e+00	3430.00
IUUC-Ola-086935	Oryzias latipes	65.87	0.00e+00	2369.00
IUUC-Ptr-090769	Pan troglodytes	94.85	0.00e+00	3413.00
IUUC-Psi-093021	Pelodiscus sinensis	89.64	0.00e+00	972.00
IUUC-Pva-102604	Pteropus vampyrus	95.71	0.00e+00	3330.00
IUUC-Rno-104875	Rattus norvegicus	92.57	0.00e+00	955.00
IUUC-Tgu-116577	Taeniopygia guttata	85.46	0.00e+00	955.00
IUUC-Tru-117611	Takifugu rubripes	69.18	0.00e+00	2594.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence