iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091601

Ensembl Protein ID

ENSPTRP00000057559.2

UniProt Accession

H2RCM9; H2RCM9_PANTR

Genbank Protein ID

ENSPTRP00000057559

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03002220

Gene Name

RBBP5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000001894.5	ENSPTRT00000065984.2	ENSPTRP00000057559.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-12	44.7	65	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H  +v++l++  d + lvs+s D+ +  WD+ +g++ +
   Q: 65   HIHPVCSLCWsRDgHKLVSASTDNIVSQWDVLSGDCDQ 102
           889********88799*******************976 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MNLELLESFG QNYPEEADGT LDCISMALTC TFNRWGTLLA VGCNDGRIVI WDFLTRGIAK 60
IISAHIHPVC SLCWSRDGHK LVSASTDNIV SQWDVLSGDC DQRFRFPSPI LKVQYHPRDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACCTCG AGTTGCTGGG TGAGAAGGGC TATGGCTGCG TTTTAGAGAA GCGTTGGGTA 60
CTGGAAAGGA GGGAACCCAG GCGGGAGGGG AGTCAGGCTG CAATCTTAGG GACACTGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071339--C:MLL1 complex
GO:0044666--C:MLL3/4 complex
GO:0005730--C:nucleolus
GO:0048188--C:Set1C/COMPASS complex
GO:0042800--F:histone methyltransferase activity (H3-K4 specific)
GO:0044212--F:transcription regulatory region DNA binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0043627--P:response to estrogen

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	35.67	4.00e-64	239.00
IUUC-Aml-002118	Ailuropoda melanoleuca	99.62	0.00e+00	1014.00
IUUC-Atr-002777	Amborella trichopoda	36.19	2.00e-61	229.00
IUUC-Apl-004056	Anas platyrhynchos	97.15	0.00e+00	992.00
IUUC-Aca-004999	Anolis carolinensis	96.75	0.00e+00	964.00
IUUC-Aly-006092	Arabidopsis lyrata	35.22	1.00e-56	213.00
IUUC-Ath-006947	Arabidopsis thaliana	33.09	1.00e-58	221.00
IUUC-Ago-007753	Ashbya gossypii	31.47	7.00e-39	154.00
IUUC-Acl-008105	Aspergillus clavatus	32.89	2.00e-47	183.00
IUUC-Afl-008633	Aspergillus flavus	32.72	1.00e-46	180.00
IUUC-Afu-009075	Aspergillus fumigatus	35.98	1.00e-30	127.00
IUUC-Ani-009233	Aspergillus nidulans	33.78	1.00e-56	214.00
IUUC-Ang-009695	Aspergillus niger	33.49	8.00e-47	181.00
IUUC-Aor-009988	Aspergillus oryzae	32.72	1.00e-46	180.00
IUUC-Ate-010313	Aspergillus terreus	31.99	4.00e-46	179.00
IUUC-Ame-011134	Astyanax mexicanus	80.04	0.00e+00	796.00
IUUC-Bgr-012302	Blumeria graminis	32.48	3.00e-47	182.00
IUUC-Bta-012946	Bos taurus	100.00	0.00e+00	1030.00
IUUC-Bci-013968	Botrytis cinerea	35.21	1.00e-54	207.00
IUUC-Bdi-014387	Brachypodium distachyon	36.78	3.00e-71	262.00
IUUC-Bra-017414	Brassica rapa	36.75	1.00e-58	221.00
IUUC-Cel-018610	Caenorhabditis elegans	42.13	5.00e-83	301.00
IUUC-Cja-019938	Callithrix jacchus	100.00	0.00e+00	1015.00
IUUC-Cfa-020726	Canis familiaris	99.24	0.00e+00	1022.00
IUUC-Cpo-021560	Cavia porcellus	100.00	0.00e+00	646.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	50.43	3.00e-29	122.00
IUUC-Csa-024192	Chlorocebus sabaeus	100.00	0.00e+00	1030.00
IUUC-Cho-024355	Choloepus hoffmanni	100.00	0.00e+00	902.00
IUUC-Cin-025285	Ciona intestinalis	67.28	0.00e+00	632.00
IUUC-Csv-026366	Ciona savignyi	66.32	3.00e-173	600.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	30.95	7.00e-43	168.00
IUUC-Cne-027092	Cryptococcus neoformans	31.27	2.00e-47	183.00
IUUC-Cme-027137	Cyanidioschyzon merolae	31.32	4.00e-26	112.00
IUUC-Dre-027374	Danio rerio	90.41	0.00e+00	862.00
IUUC-Dno-030003	Dasypus novemcinctus	93.87	0.00e+00	944.00
IUUC-Dor-030355	Dipodomys ordii	98.86	0.00e+00	1017.00
IUUC-Dse-031442	Dothistroma septosporum	33.16	5.00e-50	191.00
IUUC-Dme-031932	Drosophila melanogaster	67.14	0.00e+00	682.00
IUUC-Ete-032858	Echinops telfairi	92.65	0.00e+00	768.00
IUUC-Eca-034217	Equus caballus	99.43	0.00e+00	1026.00
IUUC-Eeu-035024	Erinaceus europaeus	96.79	0.00e+00	990.00
IUUC-Fca-035370	Felis catus	100.00	0.00e+00	1017.00
IUUC-Fal-036628	Ficedula albicollis	91.81	0.00e+00	812.00
IUUC-Fox-037739	Fusarium oxysporum	31.47	5.00e-46	178.00
IUUC-Fso-038094	Fusarium solani	31.65	2.00e-44	172.00
IUUC-Gmo-039088	Gadus morhua	89.13	0.00e+00	862.00
IUUC-Ggr-040063	Gaeumannomyces graminis	33.16	3.00e-54	206.00
IUUC-Gga-041160	Gallus gallus	97.36	0.00e+00	983.00
IUUC-Gac-041333	Gasterosteus aculeatus	90.55	0.00e+00	879.00
IUUC-Gma-043909	Glycine max	36.62	6.00e-65	241.00
IUUC-Ggo-044657	Gorilla gorilla	100.00	0.00e+00	1030.00
IUUC-Hsa-045894	Homo sapiens	100.00	0.00e+00	1030.00
IUUC-Hvu-047662	Hordeum vulgare	34.71	1.00e-64	240.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	99.40	0.00e+00	972.00
IUUC-Kpa-049095	Komagataella pastoris	29.58	3.00e-37	149.00
IUUC-Lch-049495	Latimeria chalumnae	69.19	4.00e-179	620.00
IUUC-Lpe-051038	Leersia perrieri	34.21	2.00e-60	226.00
IUUC-Loc-052680	Lepisosteus oculatus	91.78	0.00e+00	948.00
IUUC-Laf-053717	Loxodonta africana	99.62	0.00e+00	1016.00
IUUC-Mcc-055007	Macaca mulatta	97.14	0.00e+00	981.00
IUUC-Meu-056494	Macropus eugenii	96.76	1.00e-132	466.00
IUUC-Mor-057173	Magnaporthe oryzae	33.43	4.00e-54	205.00
IUUC-Mpo-057622	Magnaporthe poae	32.01	3.00e-54	205.00
IUUC-Mtr-057672	Medicago truncatula	37.82	1.00e-70	260.00
IUUC-Mla-059057	Melampsora laricipopulina	34.45	1.00e-47	184.00
IUUC-Mga-060037	Meleagris gallopavo	96.79	0.00e+00	991.00
IUUC-Mvi-060321	Microbotryum violaceum	33.50	3.00e-51	196.00
IUUC-Mmr-060755	Microcebus murinus	98.86	0.00e+00	1004.00
IUUC-Mdo-061859	Monodelphis domestica	98.49	0.00e+00	1002.00
IUUC-Mmu-063755	Mus musculus	99.05	0.00e+00	1019.00
IUUC-Mac-065292	Musa acuminata	35.19	9.00e-73	268.00
IUUC-Mpu-065896	Mustela putorius furo	99.80	0.00e+00	954.00
IUUC-Mlu-067927	Myotis lucifugus	99.43	0.00e+00	1016.00
IUUC-Nfi-068429	Neosartorya fischeri	32.66	2.00e-48	186.00
IUUC-Ncr-068738	Neurospora crassa	32.06	4.00e-48	185.00
IUUC-Nle-069608	Nomascus leucogenys	100.00	0.00e+00	1030.00
IUUC-Opr-070319	Ochotona princeps	99.04	0.00e+00	1006.00
IUUC-Ont-071451	Oreochromis niloticus	91.39	0.00e+00	902.00
IUUC-Oan-073445	Ornithorhynchus anatinus	97.83	0.00e+00	852.00
IUUC-Ocu-074341	Oryctolagus cuniculus	100.00	0.00e+00	1027.00
IUUC-Oba-075664	Oryza barthii	34.80	4.00e-65	242.00
IUUC-Obr-076630	Oryza brachyantha	34.15	2.00e-61	230.00
IUUC-Ogl-077847	Oryza glaberrima	34.68	6.00e-65	241.00
IUUC-Ogu-077970	Oryza glumaepatula	36.02	3.00e-63	236.00
IUUC-Oin-079374	Oryza indica	34.62	4.00e-65	242.00
IUUC-Olo-080992	Oryza longistaminata	34.62	8.00e-65	241.00
IUUC-Ome-081683	Oryza meridionalis	36.30	4.00e-62	232.00
IUUC-Oni-082594	Oryza nivara	34.62	4.00e-65	242.00
IUUC-Opu-083907	Oryza punctata	35.20	4.00e-66	245.00
IUUC-Oru-084400	Oryza rufipogon	34.62	4.00e-65	242.00
IUUC-Osa-085442	Oryza sativa	34.62	4.00e-65	242.00
IUUC-Ola-086569	Oryzias latipes	90.91	0.00e+00	826.00
IUUC-Oga-088947	Otolemur garnettii	93.33	0.00e+00	936.00
IUUC-Oar-090358	Ovis aries	99.81	0.00e+00	1016.00
IUUC-Pan-092466	Papio anubis	100.00	0.00e+00	1030.00
IUUC-Psi-093614	Pelodiscus sinensis	97.53	0.00e+00	996.00
IUUC-Pma-094450	Petromyzon marinus	88.64	0.00e+00	763.00
IUUC-Pno-094819	Phaeosphaeria nodorum	33.41	1.00e-48	187.00
IUUC-Ppa-095157	Physcomitrella patens	34.74	3.00e-27	115.00
IUUC-Pfo-096312	Poecilia formosa	90.08	0.00e+00	872.00
IUUC-Pab-098058	Pongo abelii	100.00	0.00e+00	1030.00
IUUC-Pop-099039	Populus trichocarpa	37.34	4.00e-63	235.00
IUUC-Pca-100623	Procavia capensis	95.09	0.00e+00	971.00
IUUC-Ppe-102053	Prunus persica	37.82	4.00e-71	262.00
IUUC-Pva-102779	Pteropus vampyrus	96.41	0.00e+00	967.00
IUUC-Pgr-103398	Puccinia graminis	35.14	1.00e-51	197.00
IUUC-Ptt-103912	Puccinia triticina	35.31	4.00e-51	195.00
IUUC-Pte-104246	Pyrenophora teres	33.26	2.00e-49	189.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	33.56	2.00e-49	189.00
IUUC-Rno-104838	Rattus norvegicus	99.43	0.00e+00	1021.00
IUUC-Sce-106229	Saccharomyces cerevisiae	30.97	2.00e-34	139.00
IUUC-Sha-106527	Sarcophilus harrisii	98.30	0.00e+00	1000.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	34.47	3.00e-58	219.00
IUUC-Spo-108025	Schizosaccharomyces pombe	37.08	1.00e-55	210.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	34.72	2.00e-53	203.00
IUUC-Smo-109474	Selaginella moellendorffii	34.62	2.00e-52	200.00
IUUC-Sit-110687	Setaria italica	35.79	4.00e-57	215.00
IUUC-Sly-111597	Solanum lycopersicum	37.16	1.00e-62	234.00
IUUC-Stu-112389	Solanum tuberosum	36.49	4.00e-62	232.00
IUUC-Sar-113284	Sorex araneus	85.82	0.00e+00	844.00
IUUC-Sbi-114362	Sorghum bicolor	32.11	4.00e-57	215.00
IUUC-Sre-115146	Sporisorium reilianum	29.02	4.00e-36	145.00
IUUC-Ssc-115604	Sus scrofa	100.00	0.00e+00	1016.00
IUUC-Tgu-117010	Taeniopygia guttata	82.80	1.00e-72	265.00
IUUC-Tru-118258	Takifugu rubripes	89.80	0.00e+00	890.00
IUUC-Tsy-119169	Tarsius syrichta	87.37	0.00e+00	641.00
IUUC-Tni-119668	Tetraodon nigroviridis	89.22	0.00e+00	870.00
IUUC-Tca-121010	Theobroma cacao	37.77	2.00e-70	259.00
IUUC-Tre-121944	Trichoderma reesei	31.99	1.00e-45	177.00
IUUC-Tvi-122283	Trichoderma virens	32.32	5.00e-44	171.00
IUUC-Tur-126395	Triticum urartu	36.20	2.00e-65	243.00
IUUC-Tme-127150	Tuber melanosporum	36.69	1.00e-64	240.00
IUUC-Tbe-127745	Tupaia belangeri	81.29	2.00e-141	495.00
IUUC-Ttr-129187	Tursiops truncatus	94.14	0.00e+00	928.00
IUUC-Uma-129654	Ustilago maydis	28.26	8.00e-33	135.00
IUUC-Vda-129788	Verticillium dahliae	28.93	1.00e-46	180.00
IUUC-Vpa-130182	Vicugna pacos	99.50	0.00e+00	758.00
IUUC-Vvi-131557	Vitis vinifera	37.34	1.00e-70	260.00
IUUC-Xtr-132007	Xenopus tropicalis	92.63	0.00e+00	914.00
IUUC-Xma-133909	Xiphophorus maculatus	90.04	0.00e+00	888.00
IUUC-Yli-134524	Yarrowia lipolytica	36.65	9.00e-58	217.00
IUUC-Zma-134821	Zea mays	32.70	4.00e-59	222.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence