iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007265

UUCD1 version

UUC-ArT-00031

Ensembl Protein ID

AT2G38590.1

UniProt Accession

Q9ZVI1; FB323_ARATH

Genbank Protein ID

AAC67359.1; AEC09553.1; AT2G38590.1

Protein Name

F-box protein At2g38590

Genbank Nucleotide ID

AC005499; CP002685; DQ069845

Gene Name

At2g38590; T6A23.21

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G38590	AT2G38590.1	AT2G38590.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	50.00	1.50e-02	37.40	IUUC-Cel-018377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTTMISNLPR VLIEEIFFRV PLKSLRAVRL TCKSWNTLSK SRSFRKLYIS KRATREEESM 60
MIAMMNFDLY SMRVVVDDDV DPSKAFKKKR NKKSIAFKRQ PIFLDEQVKI SQVFHCEGLL 120

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Nucleotide Sequence
(Fasta)

ATGACGACGA TGATCTCTAA TCTTCCAAGG GTTTTGATAG AGGAGATTTT TTTTAGGGTT 60
CCTTTGAAAT CTTTGAGAGC AGTGAGATTA ACTTGCAAAA GTTGGAACAC TCTATCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006527--F-box-assoc_dom_typ1
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom
IPR011043--Gal_Oxase/kelch_b-propeller

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF07734--FBA_1

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G38590

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005820	Arabidopsis lyrata	57.24	3.00e-118	418.00
IUUC-Bra-017133	Brassica rapa	38.64	1.00e-63	236.00
IUUC-Cel-018377	Caenorhabditis elegans	50.00	1.00e-03	36.60
IUUC-Lch-049566	Latimeria chalumnae	28.00	7.70e-01	30.00
IUUC-Laf-054388	Loxodonta africana	33.33	1.50e-01	29.30
IUUC-Ppa-095844	Physcomitrella patens	22.22	1.00e-04	40.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence