iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-054105

Ensembl Protein ID

ENSLAFP00000004808.3

UniProt Accession

G3SWT1; G3SWT1_LOXAF

Protein Name

Uncharacterized protein

Gene Name

RRP9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000016625.2	ENSLAFT00000016628.2	ENSLAFP00000013959.2
ENSLAFG00000016625.2	ENSLAFT00000005736.3	ENSLAFP00000004808.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-28	97.1	322	356
UBD/Beta-Prp	9.00e-52	176.4	143	406

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           gH++s+ c+++ ++ ++vsG+dDg++ +W l++ +
   Q: 322  GHQGSIDCIQLiNEEHMVSGADDGSVALWGLSKKR 356
           8*********9999***************987665 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlst 83
           +g h+  itc+ ++pd+s ++++ +d ti+ w+ ++g +             +  gh++ + ++ +s+dgk+l++g + ++i +w+ ++
   Q: 143  RG-HQLSITCLVITPDDSAIFSAAKDCTIIKWSRESGRKlhviprakksaEGQPLGHSSHILCMAISSDGKYLASGDRSKLILIWEAES 230
           44.45588889999***********************99999999999988888999999***************************** PP
   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
           +  ++t++gh d v  l+f + ++ l s+shdr ++vw++ +++ +e tl gh+++v  +   + ++++ +G+ D+tvr+W+++ ++ l
   Q: 231  CRHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVE-TLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQL 318
           *********************99***********************9.***********************************999988 PP
   S: 173  rtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght...........dnvksvrfspnderlvsgssDgsiriWd 250
               g h++s+ ++++  + +++vsg++dg+v lw l++++ +  +++              +v+sv+++ n++++++gs+   +r+W 
   Q: 319  VFY-G-HQGSIDCIQLINE-EHMVSGADDGSVALWGLSKKRPLALQREAHglrgepgleqpFWVSSVAALLNTDLVATGSHSSCVRLWQ 404
           755.6.*********9886.7*****************999977776655588999999999**************************8 PP
   S: 251  lr 252
           + 
   Q: 405  CG 406
           75 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MSATVAARKR GKPASGIGAG SGAGKRRRKA DSAGARDKAK GGGKMNEEIS SDSESESLAP 60
RRTEEEEEEE LEETVQEKKL RLAKLYLEQL KQQEEEKAEA RAFEEDQVAG RLKEDVLEQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGGGCAGCA TGTCGGCGAC AGTGGCGGCT CGCAAGCGGG GAAAGCCGGC CTCGGGAATC 60
GGCGCCGGTT CAGGGGCCGG CAAGCGGCGG CGGAAGGTGA GCCTGGCGCT TCCGCCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0034511--F:U3 snoRNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	32.46	1.00e-52	200.00
IUUC-Aml-002072	Ailuropoda melanoleuca	93.61	0.00e+00	749.00
IUUC-Atr-002824	Amborella trichopoda	38.27	2.00e-69	256.00
IUUC-Apl-003264	Anas platyrhynchos	76.09	2.00e-166	577.00
IUUC-Aca-004898	Anolis carolinensis	77.61	1.00e-178	619.00
IUUC-Aly-005535	Arabidopsis lyrata	36.32	1.00e-64	240.00
IUUC-Ath-007119	Arabidopsis thaliana	35.90	9.00e-70	257.00
IUUC-Ago-007710	Ashbya gossypii	28.88	3.00e-55	209.00
IUUC-Acl-008345	Aspergillus clavatus	32.99	4.00e-55	209.00
IUUC-Afl-008718	Aspergillus flavus	32.15	7.00e-54	205.00
IUUC-Afu-008966	Aspergillus fumigatus	29.59	1.00e-53	204.00
IUUC-Ani-009214	Aspergillus nidulans	31.71	1.00e-56	214.00
IUUC-Ang-009774	Aspergillus niger	33.76	3.00e-57	216.00
IUUC-Aor-009956	Aspergillus oryzae	32.15	7.00e-54	205.00
IUUC-Ate-010449	Aspergillus terreus	31.20	6.00e-55	208.00
IUUC-Ame-011860	Astyanax mexicanus	71.25	2.00e-168	585.00
IUUC-Bgr-012213	Blumeria graminis	29.86	7.00e-60	224.00
IUUC-Bta-012698	Bos taurus	91.16	0.00e+00	725.00
IUUC-Bci-013973	Botrytis cinerea	29.15	9.00e-60	224.00
IUUC-Bdi-014790	Brachypodium distachyon	35.60	3.00e-60	226.00
IUUC-Bol-016068	Brassica oleracea	37.57	1.00e-64	240.00
IUUC-Bra-017410	Brassica rapa	38.89	3.00e-60	226.00
IUUC-Cel-018616	Caenorhabditis elegans	36.94	1.00e-71	264.00
IUUC-Cja-019532	Callithrix jacchus	91.03	0.00e+00	729.00
IUUC-Cfa-020961	Canis familiaris	87.61	0.00e+00	720.00
IUUC-Cpo-021527	Cavia porcellus	90.41	0.00e+00	734.00
IUUC-Csa-023106	Chlorocebus sabaeus	93.30	0.00e+00	738.00
IUUC-Cin-025670	Ciona intestinalis	50.64	1.00e-120	426.00
IUUC-Csv-026172	Ciona savignyi	50.90	3.00e-115	408.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	33.04	1.00e-62	234.00
IUUC-Cne-027070	Cryptococcus neoformans	28.42	5.00e-46	178.00
IUUC-Cme-027125	Cyanidioschyzon merolae	26.44	9.00e-35	141.00
IUUC-Dre-027919	Danio rerio	68.48	4.00e-160	557.00
IUUC-Dno-029684	Dasypus novemcinctus	94.65	7.00e-170	589.00
IUUC-Dor-030363	Dipodomys ordii	88.14	2.00e-103	369.00
IUUC-Dse-031503	Dothistroma septosporum	32.20	1.00e-61	230.00
IUUC-Dme-031979	Drosophila melanogaster	43.54	1.00e-97	349.00
IUUC-Eca-033735	Equus caballus	95.49	0.00e+00	726.00
IUUC-Fca-036193	Felis catus	94.55	0.00e+00	743.00
IUUC-Fal-037058	Ficedula albicollis	71.97	5.00e-171	593.00
IUUC-Fox-038036	Fusarium oxysporum	32.88	1.00e-63	237.00
IUUC-Fso-038298	Fusarium solani	32.60	1.00e-62	233.00
IUUC-Gmo-038796	Gadus morhua	64.99	4.00e-140	491.00
IUUC-Ggr-040074	Gaeumannomyces graminis	31.16	4.00e-54	205.00
IUUC-Gga-040743	Gallus gallus	79.34	3.00e-138	484.00
IUUC-Gac-042583	Gasterosteus aculeatus	64.45	4.00e-165	574.00
IUUC-Gma-042659	Glycine max	38.54	5.00e-78	285.00
IUUC-Ggo-045543	Gorilla gorilla	93.38	0.00e+00	747.00
IUUC-Hsa-047017	Homo sapiens	94.00	0.00e+00	744.00
IUUC-Hvu-047173	Hordeum vulgare	36.13	1.00e-65	243.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	87.69	0.00e+00	745.00
IUUC-Kpa-049262	Komagataella pastoris	31.21	1.00e-56	214.00
IUUC-Lch-050566	Latimeria chalumnae	71.24	1.00e-152	532.00
IUUC-Lpe-051651	Leersia perrieri	34.20	3.00e-63	236.00
IUUC-Loc-051997	Lepisosteus oculatus	70.36	8.00e-163	566.00
IUUC-Lma-053182	Leptosphaeria maculans	29.71	8.00e-60	224.00
IUUC-Mcc-055215	Macaca mulatta	93.53	0.00e+00	740.00
IUUC-Meu-055943	Macropus eugenii	81.22	0.00e+00	648.00
IUUC-Mor-057069	Magnaporthe oryzae	32.53	7.00e-64	238.00
IUUC-Mpo-057358	Magnaporthe poae	31.41	9.00e-52	198.00
IUUC-Mtr-058209	Medicago truncatula	38.60	2.00e-77	283.00
IUUC-Mla-059043	Melampsora laricipopulina	27.84	2.00e-48	186.00
IUUC-Mga-060024	Meleagris gallopavo	75.08	8.00e-155	539.00
IUUC-Mvi-060371	Microbotryum violaceum	32.15	3.00e-67	249.00
IUUC-Mmr-061403	Microcebus murinus	93.63	0.00e+00	735.00
IUUC-Mdo-063026	Monodelphis domestica	79.24	0.00e+00	662.00
IUUC-Mmu-063646	Mus musculus	92.69	0.00e+00	741.00
IUUC-Mac-064801	Musa acuminata	36.32	4.00e-73	268.00
IUUC-Mpu-065760	Mustela putorius furo	91.45	0.00e+00	746.00
IUUC-Mlu-067963	Myotis lucifugus	94.40	0.00e+00	731.00
IUUC-Nfi-068288	Neosartorya fischeri	31.67	1.00e-57	217.00
IUUC-Ncr-068679	Neurospora crassa	32.52	2.00e-56	213.00
IUUC-Nle-069766	Nomascus leucogenys	84.86	0.00e+00	664.00
IUUC-Opr-070906	Ochotona princeps	92.31	0.00e+00	749.00
IUUC-Ont-071661	Oreochromis niloticus	68.54	2.00e-165	575.00
IUUC-Oan-073465	Ornithorhynchus anatinus	67.92	2.00e-149	522.00
IUUC-Ocu-074263	Oryctolagus cuniculus	91.90	0.00e+00	741.00
IUUC-Oba-075607	Oryza barthii	36.36	8.00e-59	221.00
IUUC-Ogl-077387	Oryza glaberrima	35.71	7.00e-62	231.00
IUUC-Ogu-078323	Oryza glumaepatula	36.53	4.00e-62	232.00
IUUC-Oin-079977	Oryza indica	30.63	3.00e-40	159.00
IUUC-Olo-080857	Oryza longistaminata	36.46	3.00e-62	232.00
IUUC-Ome-081568	Oryza meridionalis	36.20	2.00e-61	229.00
IUUC-Oni-082685	Oryza nivara	36.53	2.00e-65	243.00
IUUC-Opu-084049	Oryza punctata	36.53	5.00e-62	231.00
IUUC-Oru-084348	Oryza rufipogon	36.53	2.00e-65	243.00
IUUC-Osa-086076	Oryza sativa	36.53	2.00e-65	243.00
IUUC-Ola-086991	Oryzias latipes	69.87	3.00e-162	564.00
IUUC-Olu-087891	Ostreococcus lucimarinus	34.31	6.00e-62	231.00
IUUC-Oga-088991	Otolemur garnettii	91.57	0.00e+00	733.00
IUUC-Oar-090430	Ovis aries	92.14	0.00e+00	716.00
IUUC-Ptr-091359	Pan troglodytes	94.23	0.00e+00	745.00
IUUC-Pan-092499	Papio anubis	93.30	0.00e+00	738.00
IUUC-Pma-094447	Petromyzon marinus	60.34	1.00e-126	446.00
IUUC-Pno-095008	Phaeosphaeria nodorum	30.68	4.00e-62	232.00
IUUC-Ppa-095680	Physcomitrella patens	38.22	2.00e-74	273.00
IUUC-Pfo-096430	Poecilia formosa	69.87	5.00e-163	567.00
IUUC-Pab-097649	Pongo abelii	94.00	0.00e+00	741.00
IUUC-Pop-100055	Populus trichocarpa	38.95	7.00e-76	277.00
IUUC-Pca-100317	Procavia capensis	75.59	1.00e-129	456.00
IUUC-Ppe-101999	Prunus persica	38.58	1.00e-75	276.00
IUUC-Pva-103046	Pteropus vampyrus	93.67	0.00e+00	738.00
IUUC-Pgr-103655	Puccinia graminis	30.02	2.00e-52	200.00
IUUC-Ptt-103812	Puccinia triticina	31.24	9.00e-47	181.00
IUUC-Pte-104243	Pyrenophora teres	29.53	2.00e-56	213.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	29.90	2.00e-58	220.00
IUUC-Rno-104973	Rattus norvegicus	92.79	0.00e+00	734.00
IUUC-Sce-106329	Saccharomyces cerevisiae	25.99	8.00e-49	188.00
IUUC-Sha-106941	Sarcophilus harrisii	84.58	0.00e+00	660.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	32.50	1.00e-61	230.00
IUUC-Spo-108329	Schizosaccharomyces pombe	36.81	2.00e-71	263.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	30.00	5.00e-61	228.00
IUUC-Smo-109198	Selaginella moellendorffii	38.69	3.00e-62	232.00
IUUC-Sit-109694	Setaria italica	35.51	3.00e-69	256.00
IUUC-Sly-111294	Solanum lycopersicum	37.12	2.00e-76	279.00
IUUC-Stu-112747	Solanum tuberosum	37.63	1.00e-77	283.00
IUUC-Sar-113315	Sorex araneus	73.06	4.00e-73	268.00
IUUC-Sbi-114694	Sorghum bicolor	34.99	7.00e-68	251.00
IUUC-Sre-114937	Sporisorium reilianum	28.89	1.00e-64	240.00
IUUC-Ssc-116127	Sus scrofa	93.90	0.00e+00	720.00
IUUC-Tgu-117242	Taeniopygia guttata	71.43	3.00e-109	387.00
IUUC-Tru-118285	Takifugu rubripes	63.54	3.00e-166	577.00
IUUC-Tni-120368	Tetraodon nigroviridis	67.87	4.00e-159	554.00
IUUC-Tca-121724	Theobroma cacao	35.79	1.00e-69	256.00
IUUC-Tre-122106	Trichoderma reesei	33.48	1.00e-66	247.00
IUUC-Tvi-122526	Trichoderma virens	33.33	8.00e-66	244.00
IUUC-Tae-122939	Triticum aestivum	35.86	4.00e-64	238.00
IUUC-Tur-126548	Triticum urartu	35.86	5.00e-64	238.00
IUUC-Tme-126985	Tuber melanosporum	35.00	2.00e-64	239.00
IUUC-Tbe-127923	Tupaia belangeri	96.42	0.00e+00	731.00
IUUC-Ttr-129308	Tursiops truncatus	88.43	0.00e+00	657.00
IUUC-Uma-129472	Ustilago maydis	29.98	4.00e-58	219.00
IUUC-Vda-129910	Verticillium dahliae	31.55	6.00e-62	231.00
IUUC-Vvi-131683	Vitis vinifera	37.84	2.00e-82	299.00
IUUC-Xtr-132118	Xenopus tropicalis	66.41	8.00e-155	540.00
IUUC-Xma-133804	Xiphophorus maculatus	69.37	1.00e-161	562.00
IUUC-Yli-134639	Yarrowia lipolytica	33.25	1.00e-61	230.00
IUUC-Zma-135884	Zea mays	35.63	1.00e-68	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence