iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067741

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02047856

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000010258.2	ENSMLUT00000010259.2	ENSMLUP00000009348.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.80e-16	59.8	181	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 181  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 228
           67899.**********************888...***************976 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

RMGTQGSPVK SYDYLLKFLL VGDSDVGKGE ILESLQDGAA ESPYAYSNGI DYKTTTILLD 60
GRRVKLELWD TSGQGRFCTI FRSYSRGAQG ILLVYDITNR WSFDGIDRWI KEIDEHAPGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGATGGGGA CGCAGGGCAG TCCGGTCAAA AGCTACGACT ACCTCCTCAA GTTCCTGCTG 60
GTGGGCGACA GCGATGTGGG CAAGGGCGAG ATCCTGGAGA GCCTACAGGA CGGCGCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	98.14	3.00e-142	497.00
IUUC-Apl-003799	Anas platyrhynchos	89.80	4.00e-129	453.00
IUUC-Aca-005004	Anolis carolinensis	81.18	8.00e-129	452.00
IUUC-Ame-011203	Astyanax mexicanus	93.95	3.00e-152	530.00
IUUC-Bta-013490	Bos taurus	99.64	4.00e-151	526.00
IUUC-Cja-019990	Callithrix jacchus	98.58	2.00e-149	521.00
IUUC-Cfa-020527	Canis familiaris	75.12	3.00e-97	348.00
IUUC-Cpo-022437	Cavia porcellus	98.53	2.00e-143	501.00
IUUC-Csa-024147	Chlorocebus sabaeus	99.29	8.00e-151	525.00
IUUC-Cho-024716	Choloepus hoffmanni	73.05	2.00e-70	257.00
IUUC-Dre-027427	Danio rerio	93.59	3.00e-152	530.00
IUUC-Dno-029998	Dasypus novemcinctus	92.80	7.00e-116	412.00
IUUC-Dor-030584	Dipodomys ordii	89.27	3.00e-108	384.00
IUUC-Dme-031810	Drosophila melanogaster	69.20	2.00e-94	338.00
IUUC-Ete-033080	Echinops telfairi	97.51	8.00e-144	502.00
IUUC-Eca-033423	Equus caballus	98.72	1.00e-125	441.00
IUUC-Eeu-034590	Erinaceus europaeus	89.27	2.00e-111	394.00
IUUC-Fca-035697	Felis catus	98.72	4.00e-121	427.00
IUUC-Fal-037070	Ficedula albicollis	97.51	3.00e-150	524.00
IUUC-Gmo-039605	Gadus morhua	91.81	5.00e-150	523.00
IUUC-Gga-040343	Gallus gallus	97.51	3.00e-150	524.00
IUUC-Gac-041833	Gasterosteus aculeatus	88.81	1.00e-143	501.00
IUUC-Ggo-045131	Gorilla gorilla	91.81	2.00e-133	468.00
IUUC-Hsa-046237	Homo sapiens	99.29	8.00e-151	525.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	98.93	4.00e-151	526.00
IUUC-Lch-050193	Latimeria chalumnae	95.04	6.00e-154	536.00
IUUC-Loc-052243	Lepisosteus oculatus	93.62	9.00e-153	532.00
IUUC-Laf-054435	Loxodonta africana	97.86	5.00e-151	526.00
IUUC-Mcc-055337	Macaca mulatta	98.93	7.00e-150	522.00
IUUC-Meu-056731	Macropus eugenii	97.01	5.00e-80	290.00
IUUC-Mga-059204	Meleagris gallopavo	80.85	2.00e-136	477.00
IUUC-Mmr-061380	Microcebus murinus	99.28	5.00e-150	523.00
IUUC-Mdo-062438	Monodelphis domestica	97.52	7.00e-151	526.00
IUUC-Mmu-064046	Mus musculus	99.29	4.00e-151	526.00
IUUC-Mpu-066029	Mustela putorius furo	94.02	2.00e-122	431.00
IUUC-Nle-069240	Nomascus leucogenys	93.24	7.00e-138	483.00
IUUC-Opr-070662	Ochotona princeps	74.73	1.00e-128	452.00
IUUC-Ont-071248	Oreochromis niloticus	93.59	9.00e-152	528.00
IUUC-Oan-073432	Ornithorhynchus anatinus	97.02	1.00e-121	428.00
IUUC-Ocu-074559	Oryctolagus cuniculus	77.22	1.00e-127	448.00
IUUC-Olo-080270	Oryza longistaminata	34.41	5.00e-12	65.50
IUUC-Ola-086486	Oryzias latipes	86.36	2.00e-138	484.00
IUUC-Oga-088293	Otolemur garnettii	99.29	4.00e-151	526.00
IUUC-Oar-089702	Ovis aries	75.54	6.00e-105	373.00
IUUC-Ptr-090720	Pan troglodytes	99.29	8.00e-151	525.00
IUUC-Pan-091732	Papio anubis	99.29	8.00e-151	525.00
IUUC-Psi-093627	Pelodiscus sinensis	96.80	1.00e-143	502.00
IUUC-Pma-094679	Petromyzon marinus	77.54	1.00e-109	388.00
IUUC-Pfo-097105	Poecilia formosa	92.53	4.00e-151	526.00
IUUC-Pab-098054	Pongo abelii	99.29	8.00e-151	525.00
IUUC-Pca-100775	Procavia capensis	98.45	2.00e-90	324.00
IUUC-Pva-102658	Pteropus vampyrus	99.64	4.00e-151	526.00
IUUC-Rno-105303	Rattus norvegicus	99.29	4.00e-151	526.00
IUUC-Sha-106536	Sarcophilus harrisii	97.52	7.00e-151	526.00
IUUC-Sar-113518	Sorex araneus	75.10	7.00e-111	392.00
IUUC-Ssc-115719	Sus scrofa	75.28	8.00e-123	432.00
IUUC-Tgu-116858	Taeniopygia guttata	98.96	6.00e-114	402.00
IUUC-Tru-118264	Takifugu rubripes	76.49	2.00e-138	484.00
IUUC-Tsy-119011	Tarsius syrichta	75.13	3.00e-87	313.00
IUUC-Tni-120350	Tetraodon nigroviridis	92.53	3.00e-150	524.00
IUUC-Ttr-129236	Tursiops truncatus	99.29	1.00e-152	532.00
IUUC-Xtr-132079	Xenopus tropicalis	80.14	6.00e-136	476.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence