iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043246

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Genbank Nucleotide ID

CM000834

Gene Name

LOC100793485; GLYMA_01G029600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA01G03610	GLYMA01G03610.1	GLYMA01G03610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-25	88.7	50	87
UBD/Beta-Prp	2.20e-55	189.6	6	251

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v+c++   d ++l++Gs D t k+W++ tg +l
   Q: 50   GHNGAVWCCDVsRDsGRLITGSADQTAKLWNVQTGQQL 87
           8***********777*******************9876 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           ++ h+ ++t +k+ +d++ll++  +d+  +vw +++g  l ++ gh+++v++++ s+d+  l+tgs D+t+k+w+++tg+++ t++  ++ ++s
   Q: 6    MKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSGRLITGSADQTAKLWNVQTGQQLFTFN-FDSPARS 98
           44556666666666666666666666666666666666666666666666666666666666666666666666666666666666.6666666 PP
   S: 100  lsfspsgdklvsGshdrtirv.wdletgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgght 180
           ++f   gdkl++ + d   ++   ++ +   ++          + +g +g +n + + p ++ ++s++ D ++r+Wd++tgkll++   ++gh+
   Q: 99   VDFAV-GDKLAVITTDPFMELpSAIHVKRIANDpaeqtgesvlLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKLLKESdkESGHK 191
           66666.66666666666666653333333333388888999989999*****************************************9777** PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs 241
           + v+sl+ + +g ++++gsld++ +lwd +t + ++t+    ++v+ v++sp  +++v g+
   Q: 192  KTVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTE-RPVNAVAMSPLLDHVVLGG 251
           *************************************9875.4666666665555554444 PP

Organism

Glycine max

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLKYNR DGDLLFSCAK DHNPTVWFAD NGERLGTYRG HNGAVWCCDV 60
SRDSGRLITG SADQTAKLWN VQTGQQLFTF NFDSPARSVD FAVGDKLAVI TTDPFMELPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAAACCTTT GTGCTTCCTG CGTTCCTGTG AACAGCGGAA GAATACACCG CCACACGCTG 60
CAGGCCCTTT ACCTTGTGCT TCCTGCGTTC CTGTGAGAAC CCACGTTCTC TAACGCGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

gmx:100793485

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	63.48	2.00e-57	216.00
IUUC-Aml-001321	Ailuropoda melanoleuca	45.85	3.00e-85	308.00
IUUC-Atr-002468	Amborella trichopoda	72.50	2.00e-99	354.00
IUUC-Apl-003841	Anas platyrhynchos	46.15	2.00e-86	311.00
IUUC-Aca-005123	Anolis carolinensis	46.32	2.00e-88	319.00
IUUC-Aly-005473	Arabidopsis lyrata	82.32	5.00e-164	570.00
IUUC-Ath-007094	Arabidopsis thaliana	81.40	5.00e-163	566.00
IUUC-Ago-008000	Ashbya gossypii	44.31	4.00e-74	271.00
IUUC-Afl-008494	Aspergillus flavus	45.54	3.00e-80	291.00
IUUC-Ani-009230	Aspergillus nidulans	45.40	1.00e-78	286.00
IUUC-Aor-010114	Aspergillus oryzae	45.54	3.00e-80	291.00
IUUC-Ame-011534	Astyanax mexicanus	46.20	2.00e-88	319.00
IUUC-Bgr-012121	Blumeria graminis	42.59	1.00e-73	270.00
IUUC-Bta-013143	Bos taurus	46.01	6.00e-86	310.00
IUUC-Bci-013950	Botrytis cinerea	44.92	8.00e-80	290.00
IUUC-Bdi-015019	Brachypodium distachyon	81.29	4.00e-159	553.00
IUUC-Bol-015709	Brassica oleracea	83.64	2.00e-167	582.00
IUUC-Bra-017760	Brassica rapa	83.64	1.00e-168	586.00
IUUC-Cja-019741	Callithrix jacchus	46.01	6.00e-86	310.00
IUUC-Cfa-021204	Canis familiaris	45.85	4.00e-85	307.00
IUUC-Cpo-021661	Cavia porcellus	45.54	5.00e-85	307.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	52.45	3.00e-104	371.00
IUUC-Csa-024038	Chlorocebus sabaeus	46.01	6.00e-86	310.00
IUUC-Cne-026838	Cryptococcus neoformans	42.55	2.00e-77	282.00
IUUC-Dre-028567	Danio rerio	45.09	2.00e-88	318.00
IUUC-Dno-029171	Dasypus novemcinctus	45.85	2.00e-84	306.00
IUUC-Dor-030257	Dipodomys ordii	33.52	1.00e-26	114.00
IUUC-Dse-031191	Dothistroma septosporum	44.68	7.00e-77	280.00
IUUC-Dme-031879	Drosophila melanogaster	47.99	5.00e-90	324.00
IUUC-Ete-032336	Echinops telfairi	37.79	3.00e-40	158.00
IUUC-Eca-033259	Equus caballus	45.85	5.00e-85	307.00
IUUC-Eeu-035153	Erinaceus europaeus	43.07	3.00e-26	112.00
IUUC-Fca-036489	Felis catus	45.85	5.00e-85	307.00
IUUC-Fal-037485	Ficedula albicollis	45.85	3.00e-86	311.00
IUUC-Fox-037860	Fusarium oxysporum	45.40	2.00e-77	282.00
IUUC-Fso-038188	Fusarium solani	45.57	3.00e-78	285.00
IUUC-Gmo-039311	Gadus morhua	44.92	4.00e-86	311.00
IUUC-Ggr-040045	Gaeumannomyces graminis	44.75	5.00e-78	284.00
IUUC-Gga-040645	Gallus gallus	45.21	6.00e-85	307.00
IUUC-Gac-042086	Gasterosteus aculeatus	45.40	4.00e-86	311.00
IUUC-Ggo-045578	Gorilla gorilla	46.01	6.00e-86	310.00
IUUC-Hsa-046734	Homo sapiens	46.01	6.00e-86	310.00
IUUC-Hvu-047553	Hordeum vulgare	81.65	3.00e-159	554.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	45.85	6.00e-85	307.00
IUUC-Kpa-049325	Komagataella pastoris	46.18	2.00e-80	292.00
IUUC-Lch-049620	Latimeria chalumnae	46.18	3.00e-78	285.00
IUUC-Loc-052094	Lepisosteus oculatus	40.92	9.00e-73	266.00
IUUC-Lma-053047	Leptosphaeria maculans	47.69	4.00e-83	301.00
IUUC-Laf-053801	Loxodonta africana	45.77	1.00e-82	299.00
IUUC-Mcc-055498	Macaca mulatta	41.10	3.00e-67	248.00
IUUC-Meu-056729	Macropus eugenii	42.51	2.00e-76	279.00
IUUC-Mpo-057511	Magnaporthe poae	45.54	2.00e-77	282.00
IUUC-Mtr-058051	Medicago truncatula	94.17	0.00e+00	647.00
IUUC-Mla-059061	Melampsora laricipopulina	44.17	2.00e-78	285.00
IUUC-Mga-059229	Meleagris gallopavo	45.57	6.00e-84	303.00
IUUC-Mmr-060764	Microcebus murinus	46.01	3.00e-86	311.00
IUUC-Mdo-062088	Monodelphis domestica	45.40	4.00e-85	307.00
IUUC-Mmu-064304	Mus musculus	45.71	7.00e-86	310.00
IUUC-Mac-065520	Musa acuminata	88.16	2.00e-173	600.00
IUUC-Mpu-066340	Mustela putorius furo	45.85	5.00e-85	307.00
IUUC-Mlu-067111	Myotis lucifugus	45.85	2.00e-85	308.00
IUUC-Nle-069903	Nomascus leucogenys	45.85	2.00e-85	308.00
IUUC-Opr-070221	Ochotona princeps	44.79	5.00e-83	300.00
IUUC-Ont-071765	Oreochromis niloticus	46.01	1.00e-89	322.00
IUUC-Oan-073660	Ornithorhynchus anatinus	44.52	3.00e-73	268.00
IUUC-Ocu-074039	Oryctolagus cuniculus	45.85	3.00e-85	308.00
IUUC-Oba-075395	Oryza barthii	76.69	9.00e-147	512.00
IUUC-Obr-076334	Oryza brachyantha	78.83	3.00e-153	534.00
IUUC-Ogl-077751	Oryza glaberrima	83.44	2.00e-164	571.00
IUUC-Ome-081228	Oryza meridionalis	63.90	4.00e-82	297.00
IUUC-Oni-082411	Oryza nivara	75.23	4.00e-141	493.00
IUUC-Osa-085776	Oryza sativa	83.44	2.00e-164	571.00
IUUC-Ola-087053	Oryzias latipes	46.32	1.00e-87	316.00
IUUC-Olu-087602	Ostreococcus lucimarinus	62.77	1.00e-125	442.00
IUUC-Oga-088154	Otolemur garnettii	45.54	2.00e-84	305.00
IUUC-Oar-089915	Ovis aries	45.85	3.00e-85	308.00
IUUC-Ptr-091124	Pan troglodytes	37.65	5.00e-58	218.00
IUUC-Pan-092035	Papio anubis	46.01	6.00e-86	310.00
IUUC-Psi-094096	Pelodiscus sinensis	46.46	3.00e-51	194.00
IUUC-Pno-094988	Phaeosphaeria nodorum	45.23	4.00e-73	268.00
IUUC-Ppa-095949	Physcomitrella patens	76.69	1.00e-155	541.00
IUUC-Pfo-096101	Poecilia formosa	45.09	3.00e-88	318.00
IUUC-Pab-097726	Pongo abelii	46.01	6.00e-86	310.00
IUUC-Pop-099617	Populus trichocarpa	88.34	1.00e-176	612.00
IUUC-Pca-101014	Procavia capensis	46.01	5.00e-86	310.00
IUUC-Ppe-101320	Prunus persica	93.87	0.00e+00	645.00
IUUC-Pva-102789	Pteropus vampyrus	42.33	2.00e-73	269.00
IUUC-Pgr-103479	Puccinia graminis	43.87	4.00e-78	285.00
IUUC-Ptt-103981	Puccinia triticina	43.87	2.00e-78	285.00
IUUC-Pte-104278	Pyrenophora teres	45.85	7.00e-80	290.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	45.85	7.00e-80	290.00
IUUC-Rno-105867	Rattus norvegicus	42.81	1.00e-70	259.00
IUUC-Sce-106251	Saccharomyces cerevisiae	41.02	2.00e-72	266.00
IUUC-Sha-107039	Sarcophilus harrisii	45.40	4.00e-85	308.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	44.34	2.00e-80	292.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	44.92	9.00e-80	290.00
IUUC-Smo-108728	Selaginella moellendorffii	76.31	4.00e-153	533.00
IUUC-Sit-110801	Setaria italica	81.60	5.00e-161	560.00
IUUC-Sly-111326	Solanum lycopersicum	87.73	7.00e-175	605.00
IUUC-Stu-112458	Solanum tuberosum	89.26	1.00e-176	612.00
IUUC-Sbi-114063	Sorghum bicolor	80.98	2.00e-159	555.00
IUUC-Sre-115096	Sporisorium reilianum	42.73	6.00e-74	270.00
IUUC-Ssc-116080	Sus scrofa	46.01	5.00e-86	310.00
IUUC-Tgu-116988	Taeniopygia guttata	45.85	3.00e-86	311.00
IUUC-Tru-118766	Takifugu rubripes	45.40	1.00e-87	316.00
IUUC-Tni-120197	Tetraodon nigroviridis	45.71	3.00e-88	318.00
IUUC-Tca-121316	Theobroma cacao	94.17	0.00e+00	639.00
IUUC-Tre-122097	Trichoderma reesei	45.87	5.00e-79	287.00
IUUC-Tvi-122442	Trichoderma virens	45.26	5.00e-78	284.00
IUUC-Tae-125800	Triticum aestivum	81.65	2.00e-159	555.00
IUUC-Tur-126334	Triticum urartu	73.39	1.00e-135	476.00
IUUC-Tme-127038	Tuber melanosporum	45.85	3.00e-82	298.00
IUUC-Ttr-128659	Tursiops truncatus	43.25	1.00e-65	243.00
IUUC-Uma-129464	Ustilago maydis	43.62	7.00e-75	273.00
IUUC-Vda-129841	Verticillium dahliae	46.46	7.00e-79	287.00
IUUC-Vvi-131076	Vitis vinifera	91.72	0.00e+00	632.00
IUUC-Xtr-132395	Xenopus tropicalis	47.24	2.00e-88	318.00
IUUC-Xma-133383	Xiphophorus maculatus	45.09	4.00e-88	317.00
IUUC-Yli-134586	Yarrowia lipolytica	44.34	8.00e-72	263.00
IUUC-Zma-135667	Zea mays	81.29	1.00e-160	558.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence