iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088665

Ensembl Protein ID

ENSOGAP00000017973.1

UniProt Accession

H0XPD2; H0XPD2_OTOGA

Genbank Protein ID

ENSOGAP00000017973

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03052153

Gene Name

EML6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000029470.1	ENSOGAT00000027770.1	ENSOGAP00000017973.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-58	191.5	41	80
UBD/Beta-Prp	6.10e-131	436.0	661	879

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdD..gtikvWDlrtgvllk 37
           Ht +v claf sd  +l+s + D  +t+ vWD+r+g+ll 
   Q: 41   HTHGVACLAFdSDgQRLASVGLDakNTVCVWDWRKGKLLA 80
           99*********999*******9999***********9875 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatg..srdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtl 90
           gh+++ ++ ++++p k+++atg  +rd+ + vwd++t k+l+ l  +h+ +v a++fs dgk lv+++ D  + i  wd ++g+ + t 
   Q: 661  GHDDDILS-LTIHPVKDYVATGqaGRDAAVHVWDTQTLKCLSLLkGQHQRGVCALDFSADGKCLVSVGLDdfHSIVFWDWKKGEKIATT 748
           34444444.88888888888874457888888888888888888667888888888888888888888886666777888888888888 PP
   S: 91   kghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           +gh+d++  ++ +p   d+lv+ +  + i+ w+   g  +++       g+ ++ +cv++   ++l++sG++ + + +W  k   ll+t
   Q: 749  RGHKDKIFVVKCNPHHvDRLVTVG-IKHIKFWQQAGGGFISKrgtfGSVGKLETMMCVSYGRMEDLVFSGAATGDIFIW--KDILLLKT 834
           888888888888886658888877.888888888888888778876666778888888888888888888888888888..77888888 PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght 222
            +  h+++v  +   +  k +v+g++dg v+lwd   ++c++t+   +
   Q: 835  VKA-HDGPVFAMYALD--KGFVTGGKDGIVELWDDMFERCLKTYAIKR 879
           887.888888888777..568888888888888888888888876544 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

FSLALHPDKT LVATGQVGKE PYICVWDSYH VQTVSILKDV HTHGVACLAF DSDGQRLASV 60
GLDAKNTVCV WDWRKGKLLA SATGHNDYIF DISWDPYQPN RVVSCGVKHI KFWTLCGNAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAGCCTTG CCTTACACCC AGACAAAACT CTGGTTGCAA CTGGCCAAGT TGGGAAGGAG 60
CCGTATATAT GTGTATGGGA TTCTTATCAC GTCCAGACTG TGTCTATCCT TAAAGACGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001387	Ailuropoda melanoleuca	96.90	0.00e+00	3724.00
IUUC-Apl-003604	Anas platyrhynchos	93.38	0.00e+00	3579.00
IUUC-Aca-004572	Anolis carolinensis	89.01	0.00e+00	3472.00
IUUC-Ame-010713	Astyanax mexicanus	80.12	0.00e+00	3100.00
IUUC-Bta-012812	Bos taurus	96.74	0.00e+00	3717.00
IUUC-Cja-019191	Callithrix jacchus	97.43	0.00e+00	3736.00
IUUC-Cfa-020041	Canis familiaris	97.07	0.00e+00	3451.00
IUUC-Csa-023689	Chlorocebus sabaeus	97.02	0.00e+00	3739.00
IUUC-Cho-025038	Choloepus hoffmanni	95.95	0.00e+00	1485.00
IUUC-Cin-025205	Ciona intestinalis	61.66	0.00e+00	2456.00
IUUC-Csv-026014	Ciona savignyi	63.12	0.00e+00	2483.00
IUUC-Dno-029982	Dasypus novemcinctus	95.33	0.00e+00	3664.00
IUUC-Eca-034161	Equus caballus	96.11	0.00e+00	3677.00
IUUC-Fca-036307	Felis catus	97.00	0.00e+00	3720.00
IUUC-Fal-037332	Ficedula albicollis	92.45	0.00e+00	3539.00
IUUC-Gmo-039057	Gadus morhua	73.84	0.00e+00	2841.00
IUUC-Gac-042555	Gasterosteus aculeatus	79.52	0.00e+00	3113.00
IUUC-Ggo-045107	Gorilla gorilla	97.37	0.00e+00	3733.00
IUUC-Hsa-046482	Homo sapiens	97.37	0.00e+00	3734.00
IUUC-Itr-049023	Ictidomys tridecemlineatus	95.43	0.00e+00	3716.00
IUUC-Loc-052642	Lepisosteus oculatus	87.43	0.00e+00	3363.00
IUUC-Laf-053649	Loxodonta africana	96.16	0.00e+00	3637.00
IUUC-Mcc-055361	Macaca mulatta	97.33	0.00e+00	3372.00
IUUC-Meu-056618	Macropus eugenii	77.41	0.00e+00	1690.00
IUUC-Mga-059202	Meleagris gallopavo	92.63	0.00e+00	3578.00
IUUC-Mmr-060729	Microcebus murinus	98.21	0.00e+00	3760.00
IUUC-Mdo-062462	Monodelphis domestica	94.59	0.00e+00	3652.00
IUUC-Mmu-063865	Mus musculus	95.80	0.00e+00	3701.00
IUUC-Mpu-066724	Mustela putorius furo	97.21	0.00e+00	3728.00
IUUC-Mlu-067816	Myotis lucifugus	96.90	0.00e+00	3739.00
IUUC-Opr-070213	Ochotona princeps	93.37	0.00e+00	1984.00
IUUC-Ont-071928	Oreochromis niloticus	79.13	0.00e+00	3148.00
IUUC-Oan-073563	Ornithorhynchus anatinus	94.23	0.00e+00	3632.00
IUUC-Ocu-074531	Oryctolagus cuniculus	96.74	0.00e+00	3717.00
IUUC-Ola-086943	Oryzias latipes	78.33	0.00e+00	3126.00
IUUC-Olu-087860	Ostreococcus lucimarinus	39.17	1.00e-118	420.00
IUUC-Oar-090429	Ovis aries	96.79	0.00e+00	3719.00
IUUC-Ptr-091168	Pan troglodytes	87.79	0.00e+00	3305.00
IUUC-Pan-092788	Papio anubis	97.20	0.00e+00	3056.00
IUUC-Psi-093281	Pelodiscus sinensis	92.12	0.00e+00	3517.00
IUUC-Pma-094424	Petromyzon marinus	72.83	1.00e-124	439.00
IUUC-Pfo-096150	Poecilia formosa	79.35	0.00e+00	2994.00
IUUC-Pab-098561	Pongo abelii	96.04	0.00e+00	3221.00
IUUC-Pca-100177	Procavia capensis	85.75	0.00e+00	1533.00
IUUC-Rno-105002	Rattus norvegicus	95.11	0.00e+00	3690.00
IUUC-Sha-107105	Sarcophilus harrisii	92.13	0.00e+00	3543.00
IUUC-Ssc-116282	Sus scrofa	97.06	0.00e+00	3729.00
IUUC-Tgu-116807	Taeniopygia guttata	92.80	0.00e+00	3551.00
IUUC-Tru-118040	Takifugu rubripes	77.80	0.00e+00	3046.00
IUUC-Tni-120118	Tetraodon nigroviridis	75.20	0.00e+00	3021.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence