iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099309

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_560785; POPTR_0006s08810g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s08810	POPTR_0006s08810.1	POPTR_0006s08810.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-08	34.5	158	199

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f   ++ + +pC+H++h dC+  w       s + +CP+Cr
   Q: 158  CAVCKEAFeiNTEAREMPCNHIYHSDCILPW------LSIRNSCPVCR 199
           ******9988555999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASSIESSFW CYRCNRSIRL PTQDSILCPD CGGGFIEEIG ITRPHHRLTA AHRTRLRTGG 60
DHSPFNPVII LRGATTDLAS GNFELYYDDG AASGLRPLPA SISELLMDSG FERLLDQLTQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCAT CAATCGAGTC CTCATTCTGG TGCTACAGAT GCAACCGATC CATCCGGCTC 60
CCCACCCAAG ATTCAATTCT CTGCCCCGAC TGCGGCGGCG GATTCATCGA AGAAATCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0003677--F:DNA binding
GO:0003899--F:DNA-directed 5'-3' RNA polymerase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0006s08810g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051386	Leersia perrieri	55.74	1.00e-80	292.00
IUUC-Laf-054225	Loxodonta africana	36.96	3.00e-19	87.40
IUUC-Mac-065318	Musa acuminata	57.38	8.00e-87	313.00
IUUC-Ogl-077103	Oryza glaberrima	54.10	4.00e-81	294.00
IUUC-Oin-080146	Oryza indica	48.19	5.00e-53	200.00
IUUC-Olo-080227	Oryza longistaminata	42.50	4.00e-45	174.00
IUUC-Ome-081205	Oryza meridionalis	54.10	2.00e-82	298.00
IUUC-Oni-082393	Oryza nivara	54.46	5.00e-80	290.00
IUUC-Opu-083490	Oryza punctata	65.41	3.00e-59	221.00
IUUC-Oru-084888	Oryza rufipogon	54.46	5.00e-80	290.00
IUUC-Pca-100492	Procavia capensis	39.68	4.00e-19	86.30
IUUC-Ppe-101269	Prunus persica	64.75	1.00e-85	309.00
IUUC-Sit-109708	Setaria italica	47.10	8.00e-52	196.00
IUUC-Stu-112595	Solanum tuberosum	56.27	1.00e-77	282.00
IUUC-Tca-121148	Theobroma cacao	64.87	9.00e-98	349.00
IUUC-Vvi-131346	Vitis vinifera	59.25	1.00e-91	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence