iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050281

Ensembl Protein ID

ENSLACP00000006868.1

UniProt Accession

H3AB47; H3AB47_LATCH

Genbank Protein ID

ENSLACP00000006868

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01183193

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000006097.1	ENSLACT00000006927.1	ENSLACP00000006868.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-25	86.0	306	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWD 29
           ++ cl++ ++ ++lv+G+ D++++vW+
   Q: 306  GILCLDYsPEwNILVTGGVDHVVRVWN 332
           589****9999***************9 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

LEMDEFREAM RKIMGNIDDE EIDIIFMKVD TNCDGTVDWD EYLNYMLSEY QEKDFMHKEV 60
STVMFPKPMQ IVPVAHCEPI MKLVFIPSQT ISMEKFISLS RTGTLQFWNE NFHLLRTTST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGAGATGG ATGAGTTTCG GGAAGCCATG AGGAAGATTA TGGGCAACAT CGATGATGAA 60
GAAATCGATA TTATTTTTAT GAAGGTCGAC ACAAACTGTG ATGGCACGGT GGATTGGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0106--Calcium
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011992--EF-hand-dom_pair
IPR018247--EF_Hand_1_Ca_BS
IPR002048--EF_hand_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00018--EF_HAND_1
PS50222--EF_HAND_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13833--EF-hand_8
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005509--F:calcium ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cja-020006	Callithrix jacchus	40.46	3.00e-166	578.00
IUUC-Cfa-020765	Canis familiaris	39.54	2.00e-152	533.00
IUUC-Cre-022835	Chlamydomonas reinhardtii	23.99	2.00e-14	75.50
IUUC-Cin-025265	Ciona intestinalis	33.28	9.00e-93	334.00
IUUC-Dno-029238	Dasypus novemcinctus	39.57	4.00e-155	542.00
IUUC-Ggo-044932	Gorilla gorilla	39.74	3.00e-162	566.00
IUUC-Hsa-046963	Homo sapiens	39.89	2.00e-162	566.00
IUUC-Loc-052029	Lepisosteus oculatus	55.30	0.00e+00	728.00
IUUC-Laf-054508	Loxodonta africana	42.86	7.00e-105	374.00
IUUC-Mcc-054635	Macaca mulatta	40.34	5.00e-162	565.00
IUUC-Mmr-061370	Microcebus murinus	40.57	3.00e-148	519.00
IUUC-Mdo-061862	Monodelphis domestica	40.85	3.00e-158	553.00
IUUC-Mmu-063271	Mus musculus	44.19	3.00e-85	308.00
IUUC-Mpu-066224	Mustela putorius furo	40.43	7.00e-147	514.00
IUUC-Ocu-074664	Oryctolagus cuniculus	38.53	3.00e-157	548.00
IUUC-Oar-089288	Ovis aries	40.75	4.00e-163	569.00
IUUC-Psi-093985	Pelodiscus sinensis	52.22	7.00e-112	397.00
IUUC-Pfo-097353	Poecilia formosa	28.23	3.00e-61	229.00
IUUC-Tru-117566	Takifugu rubripes	35.42	3.00e-36	146.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence