iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129927

Ensembl Protein ID

EGY21330

UniProt Accession

G2WX75; G2WX75_VERDV

Genbank Protein ID

EGY21330.1

Protein Name

WD repeat-containing protein

Genbank Nucleotide ID

DS572698

Gene Name

VDAG_02854

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_02854	EGY21330	EGY21330

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-55	180.2	187	222
UBD/Beta-Prp	2.10e-73	246.2	398	513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gHt++  c+a+ +d ++++sGs D+ti++WD+ +gv
   Q: 187  GHTGWTLCVAWsPDaKIIASGSMDKTIRLWDPEKGV 222
           8******************************88775 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           ++gh+k +++ v+fspd++l+a++++d+ +k+w +++g +l++l gh ++v +v fs d+ +lvt+s+D t+kvw++st+k v+ l gh+d+v+++++ p+
   Q: 398  MNGHQK-QVNHVTFSPDGNLVASAGWDNHTKIWAARDGRFLATLRGHVGPVFQVAFSADSRLLVTCSRDTTLKVWSMSTFKLVRDLPGHQDEVYAVDWAPD 497
           455555.6666****************************************************************************************** PP
   S: 106  gdklvsGshdrtirvw 121
           g+k+ sG++d+ +r+w
   Q: 498  GKKVGSGGKDKAVRLW 513
           **************** PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MATILPPPSK RQRREELERT TIQQDVTAVA PGEDGSFKAR FVDGDGKQLA EVIEVPLADA 60
SEKNLSLLVN TLLDKDREDY LPYRFRINIP NSEIIVDTWP ANFLELLRSH GVTNPFETTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACCA TTCTCCCCCC GCCCTCGAAA CGCCAGAGGC GCGAAGAACT CGAGCGAACA 60
ACGATCCAGC AGGACGTCAC GGCTGTCGCG CCGGGCGAGG ATGGCTCGTT CAAGGCTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0042254--P:ribosome biogenesis

KEGG

vda:VDAG_02854

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	45.82	1.00e-118	417.00
IUUC-Aml-001793	Ailuropoda melanoleuca	45.82	1.00e-118	417.00
IUUC-Atr-002507	Amborella trichopoda	44.25	7.00e-119	419.00
IUUC-Apl-003964	Anas platyrhynchos	46.24	1.00e-116	411.00
IUUC-Aly-006396	Arabidopsis lyrata	44.07	1.00e-117	414.00
IUUC-Ath-007278	Arabidopsis thaliana	43.85	1.00e-117	414.00
IUUC-Ago-007951	Ashbya gossypii	49.71	8.00e-142	495.00
IUUC-Acl-008298	Aspergillus clavatus	54.83	3.00e-159	553.00
IUUC-Afl-008581	Aspergillus flavus	61.41	1.00e-132	463.00
IUUC-Afu-008906	Aspergillus fumigatus	54.55	2.00e-158	550.00
IUUC-Ani-009189	Aspergillus nidulans	53.36	1.00e-157	547.00
IUUC-Ang-009630	Aspergillus niger	55.38	1.00e-162	564.00
IUUC-Aor-010038	Aspergillus oryzae	54.21	1.00e-166	577.00
IUUC-Ate-010278	Aspergillus terreus	54.53	1.00e-162	564.00
IUUC-Ame-011890	Astyanax mexicanus	47.08	2.00e-120	424.00
IUUC-Bgr-012011	Blumeria graminis	56.76	2.00e-168	583.00
IUUC-Bta-012964	Bos taurus	45.40	9.00e-119	418.00
IUUC-Bci-013592	Botrytis cinerea	57.52	2.00e-166	577.00
IUUC-Bdi-015035	Brachypodium distachyon	45.36	5.00e-119	419.00
IUUC-Bol-015501	Brassica oleracea	44.63	3.00e-116	409.00
IUUC-Bra-017642	Brassica rapa	44.17	4.00e-117	413.00
IUUC-Cel-018430	Caenorhabditis elegans	45.06	1.00e-114	405.00
IUUC-Cja-019125	Callithrix jacchus	45.61	5.00e-119	419.00
IUUC-Cfa-021013	Canis familiaris	45.91	4.00e-113	399.00
IUUC-Cpo-021743	Cavia porcellus	46.23	4.00e-120	422.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	39.96	2.00e-93	334.00
IUUC-Csa-024270	Chlorocebus sabaeus	45.40	3.00e-117	413.00
IUUC-Cin-025795	Ciona intestinalis	46.78	6.00e-121	425.00
IUUC-Csv-025953	Ciona savignyi	47.32	8.00e-121	425.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	63.72	0.00e+00	630.00
IUUC-Cne-026901	Cryptococcus neoformans	45.25	3.00e-123	433.00
IUUC-Cme-027281	Cyanidioschyzon merolae	41.75	5.00e-92	330.00
IUUC-Dre-028515	Danio rerio	47.07	8.00e-122	428.00
IUUC-Dno-029596	Dasypus novemcinctus	46.03	2.00e-118	417.00
IUUC-Dor-030494	Dipodomys ordii	44.56	3.00e-118	416.00
IUUC-Dse-031538	Dothistroma septosporum	55.28	1.00e-160	557.00
IUUC-Dme-031974	Drosophila melanogaster	42.49	2.00e-111	394.00
IUUC-Ete-032948	Echinops telfairi	52.66	1.00e-60	225.00
IUUC-Eca-033399	Equus caballus	45.61	2.00e-118	417.00
IUUC-Eeu-035013	Erinaceus europaeus	50.24	7.00e-59	219.00
IUUC-Fca-035860	Felis catus	45.61	2.00e-118	417.00
IUUC-Fal-037069	Ficedula albicollis	51.61	9.00e-75	271.00
IUUC-Fox-038059	Fusarium oxysporum	73.79	0.00e+00	781.00
IUUC-Fso-038445	Fusarium solani	75.73	0.00e+00	792.00
IUUC-Gmo-039319	Gadus morhua	45.72	2.00e-109	387.00
IUUC-Ggr-040095	Gaeumannomyces graminis	65.33	0.00e+00	726.00
IUUC-Gga-040303	Gallus gallus	52.02	1.00e-74	271.00
IUUC-Gac-042267	Gasterosteus aculeatus	46.49	3.00e-116	410.00
IUUC-Gma-043974	Glycine max	45.40	2.00e-120	423.00
IUUC-Ggo-044637	Gorilla gorilla	44.98	1.00e-117	414.00
IUUC-Hsa-046128	Homo sapiens	44.98	3.00e-118	416.00
IUUC-Hvu-047373	Hordeum vulgare	44.79	7.00e-119	418.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	44.86	4.00e-117	412.00
IUUC-Kpa-049274	Komagataella pastoris	48.37	1.00e-139	488.00
IUUC-Lch-049907	Latimeria chalumnae	44.70	7.00e-114	402.00
IUUC-Lpe-050778	Leersia perrieri	40.95	3.00e-99	353.00
IUUC-Loc-051889	Lepisosteus oculatus	45.06	3.00e-120	423.00
IUUC-Lma-053041	Leptosphaeria maculans	54.65	9.00e-153	531.00
IUUC-Laf-053598	Loxodonta africana	45.61	4.00e-119	419.00
IUUC-Mcc-055660	Macaca mulatta	45.40	5.00e-117	412.00
IUUC-Meu-056197	Macropus eugenii	42.35	5.00e-103	366.00
IUUC-Mor-056949	Magnaporthe oryzae	65.59	0.00e+00	665.00
IUUC-Mpo-057571	Magnaporthe poae	65.74	1.00e-82	298.00
IUUC-Mtr-058530	Medicago truncatula	47.62	7.00e-118	415.00
IUUC-Mla-059133	Melampsora laricipopulina	47.88	5.00e-112	396.00
IUUC-Mga-059252	Meleagris gallopavo	51.10	1.00e-104	371.00
IUUC-Mvi-060522	Microbotryum violaceum	43.83	5.00e-125	439.00
IUUC-Mmr-061117	Microcebus murinus	45.40	2.00e-116	410.00
IUUC-Mdo-062892	Monodelphis domestica	45.19	7.00e-119	419.00
IUUC-Mmu-064108	Mus musculus	44.77	5.00e-116	409.00
IUUC-Mac-064430	Musa acuminata	44.33	9.00e-117	411.00
IUUC-Mpu-065882	Mustela putorius furo	45.61	6.00e-117	412.00
IUUC-Mlu-068123	Myotis lucifugus	45.61	2.00e-119	421.00
IUUC-Nfi-068484	Neosartorya fischeri	54.55	3.00e-158	550.00
IUUC-Ncr-068649	Neurospora crassa	66.54	0.00e+00	712.00
IUUC-Nle-069140	Nomascus leucogenys	45.19	2.00e-118	417.00
IUUC-Opr-070220	Ochotona princeps	49.86	7.00e-102	362.00
IUUC-Ont-072643	Oreochromis niloticus	46.86	7.00e-121	425.00
IUUC-Ocu-074007	Oryctolagus cuniculus	45.40	2.00e-115	407.00
IUUC-Oba-075904	Oryza barthii	45.72	2.00e-117	414.00
IUUC-Obr-076280	Oryza brachyantha	45.32	2.00e-117	414.00
IUUC-Ogl-077425	Oryza glaberrima	45.93	7.00e-118	415.00
IUUC-Ogu-078586	Oryza glumaepatula	45.79	6.00e-119	419.00
IUUC-Oin-079489	Oryza indica	43.84	7.00e-109	385.00
IUUC-Olo-080766	Oryza longistaminata	45.72	2.00e-117	413.00
IUUC-Ome-081905	Oryza meridionalis	45.93	2.00e-117	414.00
IUUC-Oni-083022	Oryza nivara	45.72	1.00e-117	414.00
IUUC-Opu-083615	Oryza punctata	45.93	1.00e-117	414.00
IUUC-Oru-085076	Oryza rufipogon	45.72	1.00e-117	414.00
IUUC-Osa-085516	Oryza sativa	45.72	1.00e-117	414.00
IUUC-Ola-087290	Oryzias latipes	47.49	6.00e-121	425.00
IUUC-Olu-087898	Ostreococcus lucimarinus	41.92	2.00e-109	387.00
IUUC-Oga-088980	Otolemur garnettii	46.56	9.00e-120	421.00
IUUC-Oar-089580	Ovis aries	42.69	1.00e-93	334.00
IUUC-Ptr-090845	Pan troglodytes	45.19	6.00e-118	416.00
IUUC-Pan-092836	Papio anubis	45.40	2.00e-117	414.00
IUUC-Pno-095052	Phaeosphaeria nodorum	54.14	1.00e-160	558.00
IUUC-Ppa-095432	Physcomitrella patens	47.49	4.00e-127	446.00
IUUC-Pfo-096963	Poecilia formosa	42.47	2.00e-98	350.00
IUUC-Pab-097716	Pongo abelii	43.10	4.00e-110	389.00
IUUC-Pop-099224	Populus trichocarpa	45.62	4.00e-122	429.00
IUUC-Pca-100682	Procavia capensis	48.45	3.00e-99	353.00
IUUC-Ppe-101819	Prunus persica	44.67	3.00e-119	420.00
IUUC-Pva-102338	Pteropus vampyrus	41.21	1.00e-73	268.00
IUUC-Pgr-103583	Puccinia graminis	48.20	5.00e-115	406.00
IUUC-Ptt-103737	Puccinia triticina	37.80	3.00e-87	314.00
IUUC-Pte-104150	Pyrenophora teres	55.09	1.00e-159	554.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	55.00	2.00e-160	557.00
IUUC-Rno-105987	Rattus norvegicus	45.61	1.00e-119	421.00
IUUC-Sce-106315	Saccharomyces cerevisiae	48.94	2.00e-141	494.00
IUUC-Sha-107273	Sarcophilus harrisii	46.00	2.00e-121	427.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	47.30	2.00e-128	450.00
IUUC-Spo-108092	Schizosaccharomyces pombe	48.74	3.00e-131	459.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	53.01	9.00e-152	528.00
IUUC-Smo-108976	Selaginella moellendorffii	47.41	2.00e-121	427.00
IUUC-Sit-110329	Setaria italica	45.11	1.00e-117	415.00
IUUC-Sly-111830	Solanum lycopersicum	45.13	8.00e-118	415.00
IUUC-Stu-112603	Solanum tuberosum	45.13	1.00e-117	414.00
IUUC-Sbi-114560	Sorghum bicolor	44.62	9.00e-118	415.00
IUUC-Sre-115133	Sporisorium reilianum	34.96	2.00e-85	308.00
IUUC-Ssc-115903	Sus scrofa	45.61	3.00e-119	420.00
IUUC-Tgu-116798	Taeniopygia guttata	45.61	2.00e-118	417.00
IUUC-Tru-118361	Takifugu rubripes	47.49	7.00e-121	425.00
IUUC-Tsy-118849	Tarsius syrichta	45.80	2.00e-117	414.00
IUUC-Tni-120094	Tetraodon nigroviridis	45.17	1.00e-118	418.00
IUUC-Tca-121634	Theobroma cacao	46.01	1.00e-118	418.00
IUUC-Tre-122051	Trichoderma reesei	73.45	0.00e+00	755.00
IUUC-Tvi-122322	Trichoderma virens	73.84	0.00e+00	788.00
IUUC-Tae-125822	Triticum aestivum	45.82	1.00e-118	418.00
IUUC-Tur-126766	Triticum urartu	44.97	1.00e-111	395.00
IUUC-Tme-127175	Tuber melanosporum	56.05	9.00e-157	545.00
IUUC-Tbe-127779	Tupaia belangeri	47.72	1.00e-111	394.00
IUUC-Ttr-128224	Tursiops truncatus	45.56	7.00e-111	392.00
IUUC-Uma-129537	Ustilago maydis	36.81	8.00e-102	362.00
IUUC-Vpa-130658	Vicugna pacos	40.89	2.00e-53	201.00
IUUC-Vvi-131659	Vitis vinifera	44.67	2.00e-120	424.00
IUUC-Xtr-132918	Xenopus tropicalis	44.01	5.00e-113	399.00
IUUC-Xma-133700	Xiphophorus maculatus	47.07	1.00e-120	424.00
IUUC-Yli-134478	Yarrowia lipolytica	49.62	5.00e-144	502.00
IUUC-Zma-135835	Zea mays	42.60	9.00e-113	398.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence