iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oru-084293

Ensembl Protein ID

ORUFI06G27440.5

UniProt Accession

A0A0E0Q1Y1; A0A0E0Q1Y1_ORYRU

Protein Name

DNA repair protein REV1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORUFI06G27440	ORUFI06G27440.1	ORUFI06G27440.1
ORUFI06G27440	ORUFI06G27440.3	ORUFI06G27440.3
ORUFI06G27440	ORUFI06G27440.5	ORUFI06G27440.5

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBM	27.98	5.00e-40	161.00	IUUC-Sce-106236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza rufipogon

Functional Description
(View)

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents.

Protein Sequence
(Fasta)

MSASSSGGRG APPPATAASP GQKRPRGDDP ASPSNRSESA PAKNPRRAFS SSPFADFGSY 60
MAAKNSKLAA QFEADASTSA AEVTGGVFAG VSIFVDGFTV PSSQELKEIM LNNGGRFVNY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGCCT CCTCCTCCGG TGGCCGCGGC GCGCCGCCGC CGGCCACCGC CGCCTCGCCC 60
GGCCAGAAGC GGCCGAGGGG AGACGACCCC GCGTCGCCTT CCAACCGCTC CGAATCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0237--DNA synthesis
KW-0238--DNA-binding
KW-0548--Nucleotidyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR012112--REV1
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF16589--BRCT_2
PF00817--IMS
PF11799--IMS_C

SMART

SM00292--BRCT

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0016779--F:nucleotidyltransferase activity
GO:0042276--P:error-prone translesion synthesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	66.60	0.00e+00	706.00
IUUC-Aml-001185	Ailuropoda melanoleuca	32.40	6.00e-85	308.00
IUUC-Atr-002915	Amborella trichopoda	43.30	0.00e+00	772.00
IUUC-Apl-004054	Anas platyrhynchos	33.13	2.00e-81	297.00
IUUC-Aca-004304	Anolis carolinensis	31.03	6.00e-79	288.00
IUUC-Aly-005696	Arabidopsis lyrata	44.20	0.00e+00	759.00
IUUC-Ath-006893	Arabidopsis thaliana	45.49	0.00e+00	770.00
IUUC-Ago-007722	Ashbya gossypii	28.03	2.00e-46	180.00
IUUC-Acl-008347	Aspergillus clavatus	29.83	8.00e-93	335.00
IUUC-Afl-008444	Aspergillus flavus	29.95	2.00e-82	300.00
IUUC-Afu-008837	Aspergillus fumigatus	28.84	7.00e-89	322.00
IUUC-Ani-009188	Aspergillus nidulans	30.18	1.00e-83	304.00
IUUC-Ang-009866	Aspergillus niger	28.69	2.00e-91	330.00
IUUC-Aor-010107	Aspergillus oryzae	29.95	3.00e-82	300.00
IUUC-Ate-010359	Aspergillus terreus	32.79	2.00e-72	267.00
IUUC-Ame-010664	Astyanax mexicanus	32.83	1.00e-74	274.00
IUUC-Bgr-012244	Blumeria graminis	35.93	1.00e-69	258.00
IUUC-Bta-013405	Bos taurus	34.64	1.00e-73	271.00
IUUC-Bci-013849	Botrytis cinerea	34.62	3.00e-70	260.00
IUUC-Bdi-014066	Brachypodium distachyon	70.78	0.00e+00	1447.00
IUUC-Bol-015544	Brassica oleracea	44.58	0.00e+00	757.00
IUUC-Bra-017792	Brassica rapa	43.18	0.00e+00	757.00
IUUC-Cel-018148	Caenorhabditis elegans	30.51	7.00e-61	228.00
IUUC-Cja-019742	Callithrix jacchus	31.22	6.00e-50	192.00
IUUC-Cfa-020112	Canis familiaris	30.00	1.00e-102	368.00
IUUC-Cpo-022152	Cavia porcellus	33.45	1.00e-82	301.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	39.76	3.00e-68	252.00
IUUC-Csa-023504	Chlorocebus sabaeus	32.33	9.00e-78	285.00
IUUC-Cho-024780	Choloepus hoffmanni	40.57	6.00e-21	96.30
IUUC-Cin-025276	Ciona intestinalis	32.13	2.00e-95	342.00
IUUC-Csv-026283	Ciona savignyi	32.28	3.00e-64	239.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	26.24	4.00e-88	319.00
IUUC-Cne-027079	Cryptococcus neoformans	32.69	6.00e-64	239.00
IUUC-Cme-027346	Cyanidioschyzon merolae	32.25	1.00e-48	188.00
IUUC-Dre-028073	Danio rerio	36.44	7.00e-72	265.00
IUUC-Dno-030038	Dasypus novemcinctus	33.18	1.00e-86	314.00
IUUC-Dor-031100	Dipodomys ordii	30.36	4.00e-71	263.00
IUUC-Dse-031310	Dothistroma septosporum	29.27	4.00e-85	309.00
IUUC-Dme-031991	Drosophila melanogaster	31.21	1.00e-73	271.00
IUUC-Ete-033082	Echinops telfairi	38.24	3.00e-42	167.00
IUUC-Eca-033471	Equus caballus	32.65	7.00e-83	301.00
IUUC-Eeu-034993	Erinaceus europaeus	40.75	3.00e-64	239.00
IUUC-Fca-035367	Felis catus	32.97	1.00e-85	311.00
IUUC-Fal-036973	Ficedula albicollis	35.27	1.00e-67	251.00
IUUC-Fox-037677	Fusarium oxysporum	33.64	7.00e-73	268.00
IUUC-Fso-038252	Fusarium solani	29.12	2.00e-87	317.00
IUUC-Gmo-039669	Gadus morhua	35.62	2.00e-82	300.00
IUUC-Ggr-039988	Gaeumannomyces graminis	33.18	3.00e-71	263.00
IUUC-Gga-040423	Gallus gallus	32.55	7.00e-79	288.00
IUUC-Gac-042134	Gasterosteus aculeatus	35.68	3.00e-79	290.00
IUUC-Gma-042929	Glycine max	44.68	0.00e+00	837.00
IUUC-Ggo-044528	Gorilla gorilla	32.44	2.00e-79	290.00
IUUC-Hsa-046259	Homo sapiens	32.84	6.00e-79	289.00
IUUC-Hvu-047139	Hordeum vulgare	68.86	0.00e+00	650.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	32.45	3.00e-83	303.00
IUUC-Kpa-049169	Komagataella pastoris	32.94	1.00e-61	231.00
IUUC-Lch-050471	Latimeria chalumnae	35.73	1.00e-73	271.00
IUUC-Lpe-050800	Leersia perrieri	85.78	0.00e+00	1795.00
IUUC-Loc-052320	Lepisosteus oculatus	27.13	2.00e-47	184.00
IUUC-Lma-053149	Leptosphaeria maculans	28.70	2.00e-74	273.00
IUUC-Laf-053810	Loxodonta africana	33.23	3.00e-79	290.00
IUUC-Mcc-055574	Macaca mulatta	31.79	2.00e-77	283.00
IUUC-Meu-055945	Macropus eugenii	29.68	4.00e-28	120.00
IUUC-Mor-057195	Magnaporthe oryzae	28.30	2.00e-83	304.00
IUUC-Mpo-057488	Magnaporthe poae	28.55	6.00e-81	295.00
IUUC-Mtr-057955	Medicago truncatula	46.20	0.00e+00	833.00
IUUC-Mla-059027	Melampsora laricipopulina	33.56	3.00e-58	219.00
IUUC-Mga-060156	Meleagris gallopavo	33.07	2.00e-78	287.00
IUUC-Mvi-060398	Microbotryum violaceum	33.94	5.00e-65	243.00
IUUC-Mmr-061113	Microcebus murinus	33.03	1.00e-79	291.00
IUUC-Mdo-063001	Monodelphis domestica	29.69	2.00e-78	286.00
IUUC-Mmu-063180	Mus musculus	34.85	9.00e-75	275.00
IUUC-Mac-065551	Musa acuminata	43.03	2.00e-127	449.00
IUUC-Mpu-066525	Mustela putorius furo	31.45	5.00e-82	299.00
IUUC-Mlu-067877	Myotis lucifugus	31.73	2.00e-76	280.00
IUUC-Nfi-068418	Neosartorya fischeri	29.52	2.00e-92	333.00
IUUC-Ncr-068648	Neurospora crassa	34.35	4.00e-73	270.00
IUUC-Nle-069959	Nomascus leucogenys	35.67	2.00e-78	287.00
IUUC-Opr-070522	Ochotona princeps	34.47	7.00e-58	219.00
IUUC-Ont-072293	Oreochromis niloticus	29.82	1.00e-69	258.00
IUUC-Oan-073519	Ornithorhynchus anatinus	41.69	1.00e-72	268.00
IUUC-Ocu-074492	Oryctolagus cuniculus	34.08	1.00e-82	301.00
IUUC-Oba-075567	Oryza barthii	97.57	0.00e+00	2239.00
IUUC-Obr-076332	Oryza brachyantha	85.56	0.00e+00	1672.00
IUUC-Ogl-077348	Oryza glaberrima	98.51	0.00e+00	2193.00
IUUC-Ogu-078779	Oryza glumaepatula	98.63	0.00e+00	2232.00
IUUC-Oin-079738	Oryza indica	90.93	0.00e+00	2029.00
IUUC-Olo-080701	Oryza longistaminata	90.35	0.00e+00	2007.00
IUUC-Ome-081708	Oryza meridionalis	93.87	0.00e+00	2017.00
IUUC-Oni-082251	Oryza nivara	98.99	0.00e+00	2236.00
IUUC-Opu-083528	Oryza punctata	94.66	0.00e+00	2060.00
IUUC-Osa-085549	Oryza sativa	98.89	0.00e+00	2200.00
IUUC-Ola-086793	Oryzias latipes	36.11	2.00e-70	260.00
IUUC-Olu-087786	Ostreococcus lucimarinus	32.55	4.00e-66	245.00
IUUC-Oga-089006	Otolemur garnettii	32.33	4.00e-77	282.00
IUUC-Oar-089597	Ovis aries	35.46	5.00e-81	296.00
IUUC-Ptr-091520	Pan troglodytes	32.84	8.00e-79	288.00
IUUC-Pan-092333	Papio anubis	36.63	2.00e-77	284.00
IUUC-Psi-094004	Pelodiscus sinensis	34.86	7.00e-67	248.00
IUUC-Pma-094128	Petromyzon marinus	35.08	4.00e-46	179.00
IUUC-Pno-094849	Phaeosphaeria nodorum	32.40	9.00e-68	251.00
IUUC-Ppa-095714	Physcomitrella patens	49.01	2.00e-145	509.00
IUUC-Pfo-096569	Poecilia formosa	35.81	6.00e-70	259.00
IUUC-Pab-097960	Pongo abelii	35.67	3.00e-78	286.00
IUUC-Pop-098921	Populus trichocarpa	44.01	0.00e+00	801.00
IUUC-Pca-100509	Procavia capensis	32.09	7.00e-51	195.00
IUUC-Ppe-101730	Prunus persica	45.31	0.00e+00	833.00
IUUC-Pva-102142	Pteropus vampyrus	32.69	4.00e-77	283.00
IUUC-Pgr-103446	Puccinia graminis	29.67	1.00e-47	184.00
IUUC-Ptt-103849	Puccinia triticina	31.21	8.00e-54	206.00
IUUC-Pte-104128	Pyrenophora teres	34.50	2.00e-72	267.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	34.65	4.00e-73	269.00
IUUC-Rno-104871	Rattus norvegicus	31.17	2.00e-82	300.00
IUUC-Sce-106236	Saccharomyces cerevisiae	27.98	9.00e-41	161.00
IUUC-Sha-106962	Sarcophilus harrisii	32.60	2.00e-79	291.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	34.17	2.00e-70	260.00
IUUC-Spo-108170	Schizosaccharomyces pombe	35.82	3.00e-57	216.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	34.24	5.00e-76	279.00
IUUC-Smo-109554	Selaginella moellendorffii	41.02	6.00e-167	581.00
IUUC-Sit-110479	Setaria italica	64.55	0.00e+00	1239.00
IUUC-Sly-111752	Solanum lycopersicum	44.53	0.00e+00	832.00
IUUC-Sar-113304	Sorex araneus	33.02	1.00e-82	301.00
IUUC-Sbi-114196	Sorghum bicolor	63.52	0.00e+00	1234.00
IUUC-Sre-115151	Sporisorium reilianum	31.61	3.00e-65	243.00
IUUC-Ssc-116104	Sus scrofa	35.95	5.00e-77	282.00
IUUC-Tgu-117438	Taeniopygia guttata	32.66	2.00e-80	293.00
IUUC-Tru-118553	Takifugu rubripes	35.33	9.00e-69	255.00
IUUC-Tsy-119056	Tarsius syrichta	33.77	5.00e-81	296.00
IUUC-Tni-119933	Tetraodon nigroviridis	31.44	1.00e-104	374.00
IUUC-Tca-121376	Theobroma cacao	43.64	0.00e+00	836.00
IUUC-Tre-121972	Trichoderma reesei	29.23	5.00e-77	282.00
IUUC-Tvi-122342	Trichoderma virens	30.36	4.00e-81	296.00
IUUC-Tae-123898	Triticum aestivum	71.89	0.00e+00	1273.00
IUUC-Tur-126735	Triticum urartu	61.97	0.00e+00	1263.00
IUUC-Tme-126999	Tuber melanosporum	34.81	6.00e-74	272.00
IUUC-Tbe-127280	Tupaia belangeri	40.15	9.00e-27	115.00
IUUC-Ttr-129104	Tursiops truncatus	35.56	3.00e-76	280.00
IUUC-Uma-129562	Ustilago maydis	27.43	4.00e-65	243.00
IUUC-Vda-129862	Verticillium dahliae	28.76	2.00e-84	306.00
IUUC-Vpa-130819	Vicugna pacos	33.55	4.00e-39	156.00
IUUC-Vvi-131111	Vitis vinifera	46.73	0.00e+00	868.00
IUUC-Xtr-132629	Xenopus tropicalis	33.13	8.00e-72	265.00
IUUC-Xma-134065	Xiphophorus maculatus	31.76	7.00e-76	278.00
IUUC-Yli-134633	Yarrowia lipolytica	32.49	5.00e-61	229.00
IUUC-Zma-135176	Zea mays	71.08	0.00e+00	1325.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence