iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099494

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-specific protease 26 family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_816265; POPTR_0002s08210g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s08210	POPTR_0002s08210.1	POPTR_0002s08210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.40e-70	236.7	108	390

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           Gl+Nlg+tCY NSvLQcL++  ++re +++ ++  lne       +++l+++++lf++l  sk  +++p  ++ +l+  +       qqD 
   Q: 108  GLTNLGATCYANSVLQCLYMNASFREIVFSVEPDLLNE-------QPVLNQFARLFAQLHASKMAVIDPAPFIMTLELDN-----AVQQDG 186
           9*****************************77777765.......59*****************************9665.....56**** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs...sreepfldlslpvpgke 180
           +Efl+ ll+ le+ l                       +++k +k k++++dlF+g++++ ++c +c++ s   s++e+f++l+l+v+g +
   Q: 187  HEFLTLLLSLLERCL-----------------------NNSKISKVKTVVQDLFRGSVSQVTTCSNCGRDSdasSKTEDFYELELNVKGLK 254
           ***************.......................35899*************************98777799*************** PP
   S: 181  etkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeek 271
                sl+++L+++ + e+l+gen+y+ce ck+ ++a+ +++l++lP+vL ++LkR++f  ++  r+ki++ + fp eLd+   +++p++ 
   Q: 255  -----SLDESLDQYLSVEQLHGENQYNCELCKSTVDATHRIRLRTLPDVLNFQLKRYEFLPKTTTRKKITSAFGFPGELDMGLRLSEPSQL 340
           .....9****************************************************************************999997755 PP
   S: 272  qkekkkYeLiavvvHsG.slssGHYvayvknekgk.WllfdDskVtevkeeev 322
              + +Y+L+av++H+G  ++sGHY+a++k+e+ + W+ fdD++V+ +    +
   Q: 341  ---EWIYDLSAVLIHKGtAVNSGHYIAHIKDENTGqWWVFDDEHVSNLGHRPF 390
           ...89**************************65555*********98765555 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSPPATRGKN KRNRQGDNVN ITSEILRKIH ASGRVTDGDV NQLYMIWKPV CQGCRVNTKD 60
NPNCFCGLIP PPSGSRKSGL WQKMPDILQA LGSDPVKDLR NTDETPAGLT NLGATCYANS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTCAAGTAA TTGAAAAGTC GGTGTTTGTC TCTCTTTCCA TCCGCACCAG CTTCTCTTTT 60
CGGGTTTCAG GTATAGGCTA CACTGTTCAT TTCACTCTGA TTTTTTTTTT CATTTTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR033841--USP48
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s08210g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002976	Amborella trichopoda	55.61	0.00e+00	1142.00
IUUC-Apl-003773	Anas platyrhynchos	33.27	4.00e-77	282.00
IUUC-Aca-004466	Anolis carolinensis	33.21	4.00e-78	284.00
IUUC-Acl-008140	Aspergillus clavatus	30.51	5.00e-37	150.00
IUUC-Ame-011554	Astyanax mexicanus	32.35	9.00e-80	291.00
IUUC-Cho-024566	Choloepus hoffmanni	29.77	2.00e-28	120.00
IUUC-Cin-025307	Ciona intestinalis	37.28	2.00e-38	152.00
IUUC-Csv-026006	Ciona savignyi	26.97	8.00e-58	218.00
IUUC-Cne-027065	Cryptococcus neoformans	25.92	9.00e-49	188.00
IUUC-Dre-027624	Danio rerio	31.75	2.00e-78	287.00
IUUC-Fal-036913	Ficedula albicollis	31.89	7.00e-80	291.00
IUUC-Gga-041041	Gallus gallus	30.60	8.00e-80	291.00
IUUC-Gac-042570	Gasterosteus aculeatus	31.63	3.00e-79	290.00
IUUC-Loc-052756	Lepisosteus oculatus	32.24	3.00e-82	299.00
IUUC-Mga-059896	Meleagris gallopavo	30.47	2.00e-78	287.00
IUUC-Ont-071450	Oreochromis niloticus	28.59	1.00e-82	301.00
IUUC-Ola-086568	Oryzias latipes	28.59	1.00e-78	287.00
IUUC-Pan-091704	Papio anubis	27.13	5.00e-77	282.00
IUUC-Psi-092937	Pelodiscus sinensis	33.00	2.00e-67	250.00
IUUC-Rno-105363	Rattus norvegicus	27.78	6.00e-86	311.00
IUUC-Stu-111969	Solanum tuberosum	61.80	0.00e+00	676.00
IUUC-Tgu-117519	Taeniopygia guttata	29.93	1.00e-68	254.00
IUUC-Tru-117651	Takifugu rubripes	28.79	8.00e-84	305.00
IUUC-Tni-120840	Tetraodon nigroviridis	28.95	1.00e-83	304.00
IUUC-Tca-121674	Theobroma cacao	68.23	0.00e+00	1501.00
IUUC-Xtr-132172	Xenopus tropicalis	30.13	3.00e-54	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence