iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012729

Ensembl Protein ID

ENSBTAP00000055629.1

UniProt Accession

G5E6J3; G5E6J3_BOVIN

Genbank Protein ID

ENSBTAP00000055629

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02020234

Gene Name

MED16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000047217.1	ENSBTAT00000064681.1	ENSBTAP00000055629.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-06	27.2	71	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H++ +tcl++  s+ +l+s+  Dg+ik+W++ +
   Q: 71   HSEAITCLEWdqSGSRLLSADADGQIKCWSMAD 103
           99********965599*************9765 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

LGAMDLAYIC EWEKWPKSTH CPSGPLACTW SCRNLIAFTT DLRSDDQDLT RMIHILDTEH 60
PWDVHSIRSE HSEAITCLEW DQSGSRLLSA DADGQIKCWS MADHLANSWE SPVGSVVEGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGACTGGTT GGTCCTAGGA AGATGGCGGC GCCGGAGCTG GGGCGTTAGA GCGAATGCAG 60
ACGGCAGCCT CCTTCTCGGT GGGCGTACAG GCTGGTCCAG TGAGTGCGGG GCTGGGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021665--Mediator_Med16
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11635--Med16

SMART

SM00320--WD40

Gene Ontology

GO:0016592--C:mediator complex
GO:0016020--C:membrane
GO:0004872--F:receptor activity
GO:0030375--F:thyroid hormone receptor coactivator activity
GO:0003713--F:transcription coactivator activity
GO:0030521--P:androgen receptor signaling pathway
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011407	Astyanax mexicanus	71.27	0.00e+00	1140.00
IUUC-Cja-019000	Callithrix jacchus	94.09	1.00e-94	338.00
IUUC-Cfa-020876	Canis familiaris	92.16	0.00e+00	1513.00
IUUC-Cpo-021655	Cavia porcellus	90.46	0.00e+00	1472.00
IUUC-Dre-027473	Danio rerio	74.26	0.00e+00	1211.00
IUUC-Dno-029564	Dasypus novemcinctus	89.33	0.00e+00	1011.00
IUUC-Eca-033914	Equus caballus	90.24	0.00e+00	868.00
IUUC-Fca-036338	Felis catus	90.29	0.00e+00	796.00
IUUC-Fal-037249	Ficedula albicollis	83.35	0.00e+00	1419.00
IUUC-Gmo-039447	Gadus morhua	70.59	2.00e-159	556.00
IUUC-Gga-041100	Gallus gallus	83.29	0.00e+00	1334.00
IUUC-Gac-042603	Gasterosteus aculeatus	70.79	2.00e-151	530.00
IUUC-Ggo-044794	Gorilla gorilla	91.84	0.00e+00	1109.00
IUUC-Hsa-045722	Homo sapiens	89.93	0.00e+00	802.00
IUUC-Itr-048948	Ictidomys tridecemlineatus	91.94	0.00e+00	1499.00
IUUC-Loc-052871	Lepisosteus oculatus	77.11	0.00e+00	1250.00
IUUC-Mcc-055201	Macaca mulatta	91.84	0.00e+00	1105.00
IUUC-Mga-059807	Meleagris gallopavo	80.24	0.00e+00	1323.00
IUUC-Mmr-060781	Microcebus murinus	90.21	0.00e+00	1494.00
IUUC-Mpu-066388	Mustela putorius furo	91.19	0.00e+00	1489.00
IUUC-Ont-072316	Oreochromis niloticus	75.69	0.00e+00	1217.00
IUUC-Ola-086721	Oryzias latipes	74.79	0.00e+00	1180.00
IUUC-Oga-088875	Otolemur garnettii	92.91	0.00e+00	1495.00
IUUC-Oar-090444	Ovis aries	97.47	0.00e+00	1582.00
IUUC-Ptr-091117	Pan troglodytes	91.08	0.00e+00	788.00
IUUC-Pan-091807	Papio anubis	92.02	0.00e+00	1415.00
IUUC-Pfo-097356	Poecilia formosa	75.81	0.00e+00	1219.00
IUUC-Pab-097953	Pongo abelii	89.64	0.00e+00	1073.00
IUUC-Pca-100896	Procavia capensis	91.17	0.00e+00	1459.00
IUUC-Rno-105038	Rattus norvegicus	89.88	0.00e+00	1462.00
IUUC-Tgu-116750	Taeniopygia guttata	82.79	0.00e+00	1412.00
IUUC-Tru-118405	Takifugu rubripes	74.85	0.00e+00	1234.00
IUUC-Tni-120217	Tetraodon nigroviridis	76.63	0.00e+00	932.00
IUUC-Ttr-129222	Tursiops truncatus	95.35	0.00e+00	1512.00
IUUC-Xtr-132084	Xenopus tropicalis	79.42	0.00e+00	1244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence