iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2348__AT3G21280.1	fgenesh2_kg.3__2348__AT3G21280.1	fgenesh2_kg.3__2348__AT3G21280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.70e-60	205.0	105	472
ULD/UDP/UBQ/UBQ_Other	1.20e-09	38.6	14	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalk 78
           Gl NlgNtCYmNS++QcL ++pel++ l +   ++ + ++ ++++  l+ + ++lf+el +++ kav+p  ++ +l+
   Q: 105  GLVNLGNTCYMNSTMQCLKSVPELKSELSN--YQSARTKDVDQTSHMLTVATRELFSEL-DKSVKAVAPMPFWMVLQ 178
           9*****************************..4445555568999**************.9999************* PP
   S: 79   keaeefs.....gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgql 150
           k+ ++f      + +qqDa+E+++++l +l+++l                       +   +++ ++ ++ lF+  l
   Q: 179  KKYPQFAqlhngNHMQQDAEECWTQMLYTLSQSL-----------------------KPPSPTEDPDAVKALFGLNL 232
           ******99999999********************.......................346788899*********** PP
   S: 151  ksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklP 227
           +s++ c+e  ++ss++e+ ++l+++++ + +     l++ L++  k e le      ++   +     k+  +++lP
   Q: 233  RSRLHCQESSEESSETESVFSLKCHISHEVN----HLHEGLKHGLKGE-LE----KTSPALGRTAVYIKESLIDSLP 300
           ***************************9886....6888887766665.44....47899999999*********** PP
   S: 228  evLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqke.............................. 274
           ++L++++ Rf +++e +++ ki +kv++pleLd+   c+++ +k+ +                              
   Q: 301  RYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSEDLRKKLKaprqklrdiegqklglqasakssskgddvk 377
           ****************************************4444444555555556666666666666666667777 PP
   S: 275  ...........................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevl 323
                                      + +Y+L++v+ H+G s++sGHYv++vk+e+gkW+++dD + +  +ee++ 
   Q: 378  mtdaegssngsgelssgdqpggasshmTGIYDLVSVLTHKGrSADSGHYVSWVKQESGKWVQYDDANTSLQREEDIT 454
           777777777888888888888888888************************************************** PP
   S: 324  eetg....staYvlfYkr 337
           + +g    + aY+++Yk 
   Q: 455  KLSGggdwHMAYIVMYKA 472
           *988************97 PP

ULD/UDP/UBQ/UBQ_Other

   S: 13   ltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
            +++v+   +  ++K +++++ g+ppe+q++++kG +L+dd +++ +glk+g++++++ +
   Q: 14   ESIEVDTLQPPYVFKAQLYDLSGVPPERQKIMVKGGLLKDDADWSTLGLKNGQKLMMMGT 73
           45566677777789*******************************************976 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MLTVSVKWQK KVFESIEVDT LQPPYVFKAQ LYDLSGVPPE RQKIMVKGGL LKDDADWSTL 60
GLKNGQKLMM MGTADEILKA PENGPVFMED LPEEEQAANL GYSAGLVNLG NTCYMNSTMQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTTTAGGT CTGATGTCTT TTCTGTAGCA AGAGGGTGAT AAAAACCCGA CCCGACTAAA 60
CCCGGCCCGG CCCACCCGGT TCGGGTATTG GCGTATTTAT TAGAGACGAA TTCAGAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_479647

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004031	Anas platyrhynchos	42.02	7.00e-110	390.00
IUUC-Aca-004361	Anolis carolinensis	41.57	6.00e-110	390.00
IUUC-Ath-007658	Arabidopsis thaliana	94.97	0.00e+00	918.00
IUUC-Acl-008258	Aspergillus clavatus	36.94	1.00e-82	300.00
IUUC-Afl-008732	Aspergillus flavus	36.52	3.00e-83	301.00
IUUC-Afu-008755	Aspergillus fumigatus	36.93	2.00e-83	302.00
IUUC-Ani-009148	Aspergillus nidulans	36.93	3.00e-85	308.00
IUUC-Ang-009878	Aspergillus niger	35.75	1.00e-79	290.00
IUUC-Aor-010239	Aspergillus oryzae	36.52	3.00e-83	301.00
IUUC-Ate-010243	Aspergillus terreus	36.27	2.00e-82	299.00
IUUC-Ame-011327	Astyanax mexicanus	27.29	8.00e-44	170.00
IUUC-Bgr-012231	Blumeria graminis	34.88	6.00e-81	294.00
IUUC-Cpo-021688	Cavia porcellus	42.28	2.00e-109	389.00
IUUC-Cre-022663	Chlamydomonas reinhardtii	42.29	2.00e-99	355.00
IUUC-Cin-025198	Ciona intestinalis	38.62	1.00e-82	300.00
IUUC-Csv-026007	Ciona savignyi	36.77	7.00e-86	310.00
IUUC-Dre-027647	Danio rerio	43.06	6.00e-114	403.00
IUUC-Dme-032079	Drosophila melanogaster	37.83	2.00e-93	335.00
IUUC-Eca-033461	Equus caballus	42.89	2.00e-113	401.00
IUUC-Fal-037528	Ficedula albicollis	42.19	1.00e-108	386.00
IUUC-Fox-037805	Fusarium oxysporum	37.66	7.00e-87	313.00
IUUC-Fso-038177	Fusarium solani	38.21	1.00e-84	306.00
IUUC-Gmo-038953	Gadus morhua	42.54	6.00e-106	377.00
IUUC-Ggr-039972	Gaeumannomyces graminis	35.94	4.00e-78	285.00
IUUC-Gga-040462	Gallus gallus	41.41	9.00e-109	386.00
IUUC-Gac-041312	Gasterosteus aculeatus	41.94	2.00e-107	381.00
IUUC-Loc-052732	Lepisosteus oculatus	42.23	2.00e-112	399.00
IUUC-Laf-053822	Loxodonta africana	42.48	1.00e-110	392.00
IUUC-Mpo-057415	Magnaporthe poae	37.43	1.00e-81	296.00
IUUC-Mga-060016	Meleagris gallopavo	41.21	2.00e-108	385.00
IUUC-Nfi-068393	Neosartorya fischeri	37.28	4.00e-83	301.00
IUUC-Ncr-068815	Neurospora crassa	37.20	1.00e-85	310.00
IUUC-Opr-070712	Ochotona princeps	31.94	8.00e-55	207.00
IUUC-Ont-071544	Oreochromis niloticus	41.94	5.00e-103	367.00
IUUC-Ola-086998	Oryzias latipes	41.78	5.00e-106	377.00
IUUC-Psi-093458	Pelodiscus sinensis	41.49	1.00e-102	365.00
IUUC-Pma-094343	Petromyzon marinus	39.02	1.00e-52	199.00
IUUC-Pno-095109	Phaeosphaeria nodorum	42.60	4.00e-71	261.00
IUUC-Pfo-096514	Poecilia formosa	41.94	1.00e-101	362.00
IUUC-Pca-100791	Procavia capensis	31.88	3.00e-56	211.00
IUUC-Pte-104109	Pyrenophora teres	35.92	8.00e-82	297.00
IUUC-Pyt-104766	Pyrenophora triticirepentis	35.39	1.00e-80	293.00
IUUC-Sja-107769	Schizosaccharomyces japonicus	35.93	4.00e-79	287.00
IUUC-Spo-108174	Schizosaccharomyces pombe	38.52	9.00e-80	290.00
IUUC-Sre-115011	Sporisorium reilianum	37.81	4.00e-65	241.00
IUUC-Ssc-116273	Sus scrofa	42.48	1.00e-108	385.00
IUUC-Tgu-117063	Taeniopygia guttata	41.99	1.00e-108	385.00
IUUC-Tru-118381	Takifugu rubripes	41.68	3.00e-104	371.00
IUUC-Tsy-119076	Tarsius syrichta	39.73	7.00e-43	167.00
IUUC-Tni-119941	Tetraodon nigroviridis	41.33	3.00e-99	355.00
IUUC-Tvi-122543	Trichoderma virens	34.18	4.00e-79	288.00
IUUC-Tbe-128030	Tupaia belangeri	37.78	3.00e-90	325.00
IUUC-Uma-129657	Ustilago maydis	33.27	5.00e-77	281.00
IUUC-Vpa-130284	Vicugna pacos	28.82	4.00e-31	128.00
IUUC-Xtr-132235	Xenopus tropicalis	41.41	7.00e-109	386.00
IUUC-Xma-133840	Xiphophorus maculatus	41.33	2.00e-105	375.00
IUUC-Yli-134453	Yarrowia lipolytica	38.73	2.00e-87	315.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence