iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016675

Ensembl Protein ID

Bra011142.1-P

UniProt Accession

M4D3T8; M4D3T8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra011142	Bra011142.1	Bra011142.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-22	77.7	15	48

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH  sv +++f ++  ll +Gs Dg +++WD+ +
   Q: 15   GHRHSVMDVSFhPSkSLLFTGSADGELRIWDTIQ 48
           8***********77799**************755 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSKRPPPDPV AVLRGHRHSV MDVSFHPSKS LLFTGSADGE LRIWDTIQHR TVSSAWAHSR 60
ANGVLAVAAS PWLGENKIIS QGRDGTVKCW DIEDGGLSRD PLLVLNTSAY HFCKFSLVKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCAAGA GACCGCCGCC TGATCCGGTG GCTGTGCTTA GAGGACACCG TCACTCTGTT 60
ATGGACGTTT CGTTCCATCC ATCAAAGTCT CTGCTTTTCA CTGGGTAAGT TGGTTTTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0048700--P:acquisition of desiccation tolerance in seed
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031570--P:DNA integrity checkpoint
GO:0009793--P:embryo development ending in seed dormancy
GO:0048481--P:plant ovule development
GO:0009663--P:plasmodesma organization
GO:0010497--P:plasmodesmata-mediated intercellular transport
GO:0009555--P:pollen development
GO:0071158--P:positive regulation of cell cycle arrest
GO:0006282--P:regulation of DNA repair
GO:2000280--P:regulation of root development
GO:0010044--P:response to aluminum ion
GO:0072718--P:response to cisplatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	45.89	7.00e-97	347.00
IUUC-Aml-001556	Ailuropoda melanoleuca	29.19	3.00e-34	138.00
IUUC-Atr-002691	Amborella trichopoda	53.83	4.00e-124	437.00
IUUC-Apl-003227	Anas platyrhynchos	31.28	2.00e-38	152.00
IUUC-Aly-006168	Arabidopsis lyrata	86.79	0.00e+00	691.00
IUUC-Ath-007145	Arabidopsis thaliana	86.79	0.00e+00	688.00
IUUC-Acl-008132	Aspergillus clavatus	28.00	6.00e-15	75.10
IUUC-Afl-008655	Aspergillus flavus	24.87	5.00e-24	105.00
IUUC-Afu-008778	Aspergillus fumigatus	25.62	1.00e-24	107.00
IUUC-Ang-009760	Aspergillus niger	27.53	7.00e-25	108.00
IUUC-Bgr-012119	Blumeria graminis	29.20	1.00e-28	120.00
IUUC-Bta-012556	Bos taurus	29.44	3.00e-35	142.00
IUUC-Bci-013869	Botrytis cinerea	28.91	1.00e-12	66.60
IUUC-Bdi-014151	Brachypodium distachyon	54.07	4.00e-114	404.00
IUUC-Bol-016319	Brassica oleracea	95.32	0.00e+00	760.00
IUUC-Cja-019523	Callithrix jacchus	28.99	2.00e-33	136.00
IUUC-Cfa-021217	Canis familiaris	35.89	1.00e-30	127.00
IUUC-Cpo-021506	Cavia porcellus	29.06	3.00e-32	132.00
IUUC-Csa-023674	Chlorocebus sabaeus	29.29	2.00e-33	135.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	26.06	7.00e-19	87.80
IUUC-Cne-026836	Cryptococcus neoformans	22.25	5.00e-10	58.90
IUUC-Cme-027295	Cyanidioschyzon merolae	24.45	6.00e-09	54.70
IUUC-Dre-027592	Danio rerio	28.21	3.00e-35	142.00
IUUC-Dno-029880	Dasypus novemcinctus	32.51	1.00e-29	123.00
IUUC-Dor-030266	Dipodomys ordii	39.16	3.00e-27	115.00
IUUC-Dse-031212	Dothistroma septosporum	28.08	7.00e-28	117.00
IUUC-Dme-032209	Drosophila melanogaster	33.73	4.00e-23	101.00
IUUC-Eca-033371	Equus caballus	28.10	4.00e-34	138.00
IUUC-Fca-035558	Felis catus	28.93	7.00e-35	140.00
IUUC-Fal-036794	Ficedula albicollis	31.87	6.00e-40	157.00
IUUC-Gmo-038742	Gadus morhua	27.95	4.00e-33	134.00
IUUC-Gga-040868	Gallus gallus	30.61	3.00e-40	158.00
IUUC-Gac-041646	Gasterosteus aculeatus	29.90	2.00e-39	155.00
IUUC-Gma-044269	Glycine max	62.31	4.00e-141	494.00
IUUC-Ggo-044553	Gorilla gorilla	28.91	9.00e-34	137.00
IUUC-Hsa-046217	Homo sapiens	29.18	1.00e-33	136.00
IUUC-Hvu-047647	Hordeum vulgare	52.38	7.00e-115	406.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	28.84	2.00e-33	135.00
IUUC-Lch-050134	Latimeria chalumnae	28.76	1.00e-35	143.00
IUUC-Lpe-051524	Leersia perrieri	50.77	3.00e-96	344.00
IUUC-Loc-051757	Lepisosteus oculatus	29.87	3.00e-33	135.00
IUUC-Laf-053733	Loxodonta africana	35.21	2.00e-30	126.00
IUUC-Mcc-055477	Macaca mulatta	28.53	1.00e-25	110.00
IUUC-Meu-056758	Macropus eugenii	39.71	2.00e-11	62.80
IUUC-Mor-057289	Magnaporthe oryzae	23.58	7.00e-12	64.70
IUUC-Mtr-058616	Medicago truncatula	59.42	7.00e-126	443.00
IUUC-Mga-059637	Meleagris gallopavo	26.56	3.00e-18	84.70
IUUC-Mvi-060385	Microbotryum violaceum	22.43	7.00e-21	94.70
IUUC-Mmr-061675	Microcebus murinus	29.43	2.00e-32	132.00
IUUC-Mdo-062782	Monodelphis domestica	29.27	2.00e-34	139.00
IUUC-Mmu-064058	Mus musculus	31.07	3.00e-40	158.00
IUUC-Mac-065262	Musa acuminata	56.56	2.00e-129	454.00
IUUC-Mpu-066633	Mustela putorius furo	32.20	8.00e-28	117.00
IUUC-Mlu-067333	Myotis lucifugus	36.06	6.00e-31	127.00
IUUC-Nfi-068581	Neosartorya fischeri	26.12	8.00e-26	111.00
IUUC-Ncr-068680	Neurospora crassa	28.20	2.00e-17	83.60
IUUC-Nle-069485	Nomascus leucogenys	30.21	7.00e-32	130.00
IUUC-Oan-073361	Ornithorhynchus anatinus	36.91	9.00e-25	107.00
IUUC-Ocu-073923	Oryctolagus cuniculus	27.13	6.00e-26	111.00
IUUC-Oba-075743	Oryza barthii	49.63	8.00e-105	373.00
IUUC-Obr-076879	Oryza brachyantha	54.59	2.00e-110	392.00
IUUC-Ogl-077813	Oryza glaberrima	52.99	1.00e-113	402.00
IUUC-Ogu-078196	Oryza glumaepatula	49.63	8.00e-105	373.00
IUUC-Oin-080131	Oryza indica	53.26	2.00e-114	404.00
IUUC-Olo-080613	Oryza longistaminata	56.84	3.00e-61	228.00
IUUC-Ome-081912	Oryza meridionalis	49.87	3.00e-104	371.00
IUUC-Oni-082813	Oryza nivara	50.26	4.00e-104	371.00
IUUC-Opu-083663	Oryza punctata	53.42	4.00e-120	424.00
IUUC-Oru-085102	Oryza rufipogon	50.39	3.00e-103	367.00
IUUC-Osa-086204	Oryza sativa	53.26	2.00e-114	404.00
IUUC-Ola-086541	Oryzias latipes	37.44	9.00e-31	127.00
IUUC-Olu-087776	Ostreococcus lucimarinus	36.53	6.00e-18	83.20
IUUC-Oga-088039	Otolemur garnettii	30.32	6.00e-33	134.00
IUUC-Oar-089704	Ovis aries	50.65	1.00e-19	87.00
IUUC-Ptr-091291	Pan troglodytes	28.91	9.00e-34	137.00
IUUC-Pan-092644	Papio anubis	29.29	5.00e-33	134.00
IUUC-Psi-093646	Pelodiscus sinensis	30.85	2.00e-39	155.00
IUUC-Ppa-095698	Physcomitrella patens	40.68	1.00e-78	286.00
IUUC-Pfo-096601	Poecilia formosa	29.90	8.00e-37	147.00
IUUC-Pab-098407	Pongo abelii	29.37	3.00e-34	138.00
IUUC-Pop-099193	Populus trichocarpa	64.86	1.00e-150	525.00
IUUC-Pca-100366	Procavia capensis	26.80	9.00e-28	117.00
IUUC-Ppe-101608	Prunus persica	64.87	3.00e-149	521.00
IUUC-Pva-102775	Pteropus vampyrus	36.54	2.00e-30	125.00
IUUC-Pte-104132	Pyrenophora teres	25.24	5.00e-16	79.00
IUUC-Rno-105626	Rattus norvegicus	28.46	3.00e-35	142.00
IUUC-Sha-106539	Sarcophilus harrisii	30.23	7.00e-33	134.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	36.07	1.00e-16	80.50
IUUC-Spo-108326	Schizosaccharomyces pombe	35.71	3.00e-17	82.40
IUUC-Smo-108756	Selaginella moellendorffii	43.56	1.00e-88	319.00
IUUC-Sit-109771	Setaria italica	56.85	2.00e-126	445.00
IUUC-Sly-111138	Solanum lycopersicum	60.57	3.00e-139	487.00
IUUC-Stu-112425	Solanum tuberosum	61.88	1.00e-140	492.00
IUUC-Sbi-114356	Sorghum bicolor	55.76	2.00e-119	422.00
IUUC-Ssc-115256	Sus scrofa	41.89	6.00e-30	124.00
IUUC-Tgu-116774	Taeniopygia guttata	32.28	3.00e-30	125.00
IUUC-Tru-117900	Takifugu rubripes	29.43	2.00e-31	129.00
IUUC-Tsy-119540	Tarsius syrichta	47.37	2.00e-17	82.80
IUUC-Tni-120252	Tetraodon nigroviridis	29.79	3.00e-36	145.00
IUUC-Tca-121717	Theobroma cacao	65.22	3.00e-149	521.00
IUUC-Tre-122069	Trichoderma reesei	24.15	7.00e-19	87.80
IUUC-Tvi-122673	Trichoderma virens	24.60	5.00e-19	88.60
IUUC-Tae-123804	Triticum aestivum	52.91	5.00e-116	410.00
IUUC-Tme-127222	Tuber melanosporum	30.94	2.00e-14	73.60
IUUC-Ttr-129240	Tursiops truncatus	38.62	6.00e-30	124.00
IUUC-Uma-129437	Ustilago maydis	32.95	3.00e-14	72.40
IUUC-Vda-129913	Verticillium dahliae	25.33	1.00e-16	80.10
IUUC-Vvi-131718	Vitis vinifera	65.54	1.00e-151	528.00
IUUC-Xtr-132109	Xenopus tropicalis	27.79	2.00e-35	142.00
IUUC-Xma-133366	Xiphophorus maculatus	30.49	3.00e-37	148.00
IUUC-Zma-135563	Zea mays	48.51	6.00e-101	360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence