iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095543

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545106

Gene Name

PHYPADRAFT_108027

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S217_66V6	PP1S217_66V6.1	PP1S217_66V6.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	37.96	3.00e-50	196.00	IUUC-Ath-007210

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MADFVAYKRM MELSSAEEEA SHSGLIPSLP DDVFLKCLVK VPLQWHANLQ RVSRALRDLV 60
QSSEYYAQRK TEAATNALVC MLQPVPMSTK SLEEKISSSS TVPVSDPVYG ITVLDVENSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTATTATTA TATCCTGTTC TGTTCCAAAA ACTATCTGGA AAGGGGAATC GGATCCACCT 60
GCTAGTTAGA TGGTTTGTCC GAAGTCCCTT CCACTAGCAC GCACTGTTCA TTCTTTAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0880--Kelch repeat
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR001810--F-box_dom
IPR015916--Gal_Oxidase_b-propeller
IPR006652--Kelch_1

Pfam

PF01344--Kelch_1

SMART

SM00256--FBOX
SM00612--Kelch

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0016567--P:protein ubiquitination

KEGG

ppp:PHYPADRAFT_108027

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002518	Amborella trichopoda	30.21	3.00e-48	184.00
IUUC-Apl-004132	Anas platyrhynchos	25.97	2.00e-15	76.60
IUUC-Aly-006346	Arabidopsis lyrata	38.72	1.00e-56	213.00
IUUC-Ath-007210	Arabidopsis thaliana	39.86	1.00e-55	209.00
IUUC-Ame-011222	Astyanax mexicanus	27.57	3.00e-18	85.90
IUUC-Bta-012855	Bos taurus	27.03	1.00e-14	74.30
IUUC-Bdi-014921	Brachypodium distachyon	34.87	1.00e-51	196.00
IUUC-Bol-015268	Brassica oleracea	35.69	2.00e-44	172.00
IUUC-Bra-016923	Brassica rapa	37.19	8.00e-49	187.00
IUUC-Cel-018622	Caenorhabditis elegans	30.97	5.00e-13	68.90
IUUC-Cpo-021500	Cavia porcellus	27.57	9.00e-15	74.70
IUUC-Dre-028758	Danio rerio	30.27	2.00e-18	86.30
IUUC-Dor-030704	Dipodomys ordii	27.27	2.00e-15	76.60
IUUC-Fal-037414	Ficedula albicollis	25.97	1.00e-15	77.00
IUUC-Gmo-039716	Gadus morhua	26.44	2.00e-14	73.60
IUUC-Gga-040801	Gallus gallus	25.00	1.00e-15	77.80
IUUC-Gma-042989	Glycine max	33.68	9.00e-54	203.00
IUUC-Hvu-047097	Hordeum vulgare	33.50	7.00e-43	167.00
IUUC-Lch-050253	Latimeria chalumnae	24.28	1.00e-13	71.20
IUUC-Lpe-050853	Leersia perrieri	35.48	4.00e-46	177.00
IUUC-Loc-052224	Lepisosteus oculatus	26.05	5.00e-15	75.50
IUUC-Meu-056415	Macropus eugenii	27.57	8.00e-14	71.20
IUUC-Mtr-058084	Medicago truncatula	42.35	4.00e-57	214.00
IUUC-Mga-059506	Meleagris gallopavo	25.00	1.00e-15	77.40
IUUC-Mmr-060695	Microcebus murinus	27.03	1.00e-14	73.90
IUUC-Mdo-062539	Monodelphis domestica	28.11	1.00e-15	77.40
IUUC-Mmu-063833	Mus musculus	27.81	1.00e-15	77.00
IUUC-Mac-065270	Musa acuminata	32.28	7.00e-52	196.00
IUUC-Mlu-067351	Myotis lucifugus	26.49	8.00e-15	74.70
IUUC-Ont-072620	Oreochromis niloticus	24.38	6.00e-14	72.00
IUUC-Oba-075850	Oryza barthii	31.34	1.00e-11	62.80
IUUC-Obr-076711	Oryza brachyantha	40.19	4.00e-39	153.00
IUUC-Ogl-077502	Oryza glaberrima	34.27	5.00e-36	144.00
IUUC-Ogu-078360	Oryza glumaepatula	34.92	5.00e-36	144.00
IUUC-Oin-079816	Oryza indica	34.27	9.00e-36	143.00
IUUC-Olo-080536	Oryza longistaminata	23.05	6.00e-11	63.20
IUUC-Ome-081176	Oryza meridionalis	34.09	1.00e-42	166.00
IUUC-Oni-082714	Oryza nivara	34.27	5.00e-36	144.00
IUUC-Opu-083272	Oryza punctata	34.52	1.00e-44	172.00
IUUC-Oru-084247	Oryza rufipogon	35.70	9.00e-40	156.00
IUUC-Osa-085360	Oryza sativa	34.27	5.00e-36	144.00
IUUC-Oar-089890	Ovis aries	27.03	9.00e-15	74.30
IUUC-Psi-093381	Pelodiscus sinensis	28.11	1.00e-15	77.40
IUUC-Pma-094681	Petromyzon marinus	24.88	1.00e-09	57.00
IUUC-Pop-099744	Populus trichocarpa	37.29	2.00e-51	195.00
IUUC-Pca-100739	Procavia capensis	29.76	3.00e-14	72.80
IUUC-Ppe-101415	Prunus persica	41.18	3.00e-61	228.00
IUUC-Pva-102911	Pteropus vampyrus	26.49	1.00e-14	73.90
IUUC-Rno-105073	Rattus norvegicus	27.81	2.00e-15	76.60
IUUC-Sha-107321	Sarcophilus harrisii	28.65	1.00e-15	77.40
IUUC-Smo-109140	Selaginella moellendorffii	41.13	1.00e-51	195.00
IUUC-Sit-110557	Setaria italica	30.91	2.00e-27	115.00
IUUC-Sly-110913	Solanum lycopersicum	33.33	2.00e-51	195.00
IUUC-Stu-112061	Solanum tuberosum	32.80	6.00e-51	193.00
IUUC-Sbi-114056	Sorghum bicolor	34.27	3.00e-44	171.00
IUUC-Ssc-115450	Sus scrofa	27.03	5.00e-15	75.50
IUUC-Tgu-117089	Taeniopygia guttata	25.87	7.00e-14	71.60
IUUC-Tsy-119161	Tarsius syrichta	28.95	2.00e-13	70.10
IUUC-Tni-120245	Tetraodon nigroviridis	34.51	2.00e-13	70.10
IUUC-Tca-121460	Theobroma cacao	38.52	2.00e-57	214.00
IUUC-Tae-125904	Triticum aestivum	34.29	2.00e-43	169.00
IUUC-Vvi-130895	Vitis vinifera	33.33	2.00e-50	191.00
IUUC-Xtr-132635	Xenopus tropicalis	25.98	1.00e-14	73.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence