iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003383

Ensembl Protein ID

ENSAPLP00000013669.1

UniProt Accession

U3J2E2; U3J2E2_ANAPL

Genbank Protein ID

ENSAPLP00000013669

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01084222

Gene Name

VPS13D

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000013749.1	ENSAPLT00000014431.1	ENSAPLP00000013669.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.10e-07	28.9	2645	2681

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLld 40
           e++l+ l+e GF+ e+++ aL+a+ ++l+ A+ +L++
   Q: 2645 EMQLARLQELGFSMEDCRHALLACQGDLNKAASWLFK 2681
           789********************************96 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MLEGLVAWVL NTYLGKYVNN LNTDQLSVAL LKGAVELENL PLKKDALKEL ELPFEVKAGF 60
IGKITLQIPF YRPHVDPWVI SVSKLHLIGA PEKKEDFDEE REKLQEREHK KALLLALEEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGGAAG GATTAGTAGC CTGGGTCCTC AATACCTATT TGGGCAAATA TGTCAACAAC 60
CTGAATACAG ACCAACTTTC AGTTGCTCTT CTAAAAGGTG AGGTTTTGGG GTATTTTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR009543--SHR-BD
IPR015940--UBA
IPR009060--UBA-like
IPR026847--VPS13
IPR031645--VPS13_C
IPR031642--VPS13_mid_rpt
IPR026854--VPS13_N
IPR031646--VPS13_N2

PROSITE

PS50030--UBA

Pfam

PF12624--Chorein_N
PF06650--SHR-BD
PF00627--UBA
PF16908--VPS13
PF16909--VPS13_C
PF16910--VPS13_mid_rpt

SMART

SM00165--UBA

Gene Ontology

GO:0070062--C:extracellular exosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014805	Brachypodium distachyon	27.52	2.70e-01	30.40
IUUC-Loc-052809	Lepisosteus oculatus	65.75	0.00e+00	5469.00
IUUC-Olu-087707	Ostreococcus lucimarinus	38.10	2.00e-02	32.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence