iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107537

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01160958

Gene Name

RNFT1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000016041.1	ENSSHAT00000019054.1	ENSSHAP00000018898.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-07	31.4	340	378

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ +f++ p++l C+H+f+++C+  w       ++e +CPlCr
   Q: 340  CSICQAEFQK-PILLICQHIFCEECITLW------FNREKTCPLCR 378
           **********.999***************......**********8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MQASCSHLHN LPGTGGSETA PASHCAHSVR MTGEGACHHP GEIHIQISAV PGECGESLSP 60
RNLRSASQSN TQGCIHSRLR SHSHNEARQP DDVTMDPGEN GSSSISEFRY LFRWLQKSLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAAGCCA GCTGTAGTCA TCTTCACAAT CTGCCAGGAA CTGGAGGCAG TGAGACTGCC 60
CCAGCTTCTC ATTGTGCCCA TTCTGTAAGA ATGACTGGTG AAGGTGCTTG CCATCATCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

shr:100935138

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000709	Aegilops tauschii	29.37	2.00e-26	112.00
IUUC-Aml-001586	Ailuropoda melanoleuca	79.50	1.00e-176	612.00
IUUC-Apl-003875	Anas platyrhynchos	72.50	1.00e-142	499.00
IUUC-Aca-004325	Anolis carolinensis	62.81	2.00e-123	435.00
IUUC-Aly-005949	Arabidopsis lyrata	31.63	8.00e-36	144.00
IUUC-Ath-007582	Arabidopsis thaliana	31.29	3.00e-37	149.00
IUUC-Ame-010748	Astyanax mexicanus	57.59	4.00e-95	341.00
IUUC-Bta-013167	Bos taurus	80.75	1.00e-179	622.00
IUUC-Bdi-014696	Brachypodium distachyon	30.17	2.00e-32	132.00
IUUC-Bol-015956	Brassica oleracea	30.98	9.00e-34	137.00
IUUC-Bra-016928	Brassica rapa	31.29	4.00e-35	142.00
IUUC-Cel-018190	Caenorhabditis elegans	23.81	3.00e-18	85.90
IUUC-Cja-019669	Callithrix jacchus	79.75	0.00e+00	626.00
IUUC-Cfa-020610	Canis familiaris	80.50	0.00e+00	637.00
IUUC-Cpo-021979	Cavia porcellus	80.00	9.00e-168	582.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	41.94	8.00e-11	61.20
IUUC-Csa-023752	Chlorocebus sabaeus	79.50	0.00e+00	635.00
IUUC-Cho-024880	Choloepus hoffmanni	72.75	4.00e-152	530.00
IUUC-Dre-028522	Danio rerio	59.73	2.00e-90	325.00
IUUC-Dno-029312	Dasypus novemcinctus	80.47	2.00e-174	605.00
IUUC-Dor-030524	Dipodomys ordii	71.25	9.00e-118	416.00
IUUC-Dme-031681	Drosophila melanogaster	31.50	4.00e-27	116.00
IUUC-Ete-032456	Echinops telfairi	69.83	3.00e-155	541.00
IUUC-Eca-033852	Equus caballus	45.06	2.00e-80	292.00
IUUC-Eeu-034649	Erinaceus europaeus	71.28	3.00e-75	275.00
IUUC-Fca-036321	Felis catus	76.81	2.00e-174	605.00
IUUC-Fal-036873	Ficedula albicollis	69.58	5.00e-138	483.00
IUUC-Gmo-038501	Gadus morhua	45.39	1.00e-81	296.00
IUUC-Gga-040583	Gallus gallus	67.00	1.00e-128	452.00
IUUC-Gac-042530	Gasterosteus aculeatus	53.21	4.00e-86	311.00
IUUC-Gma-044109	Glycine max	32.54	3.00e-34	139.00
IUUC-Ggo-045577	Gorilla gorilla	76.56	3.00e-176	610.00
IUUC-Hsa-046395	Homo sapiens	79.75	0.00e+00	635.00
IUUC-Hvu-047080	Hordeum vulgare	30.71	1.00e-27	115.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	79.50	0.00e+00	630.00
IUUC-Lch-049516	Latimeria chalumnae	59.31	3.00e-122	431.00
IUUC-Lpe-051163	Leersia perrieri	30.85	5.00e-34	138.00
IUUC-Loc-052692	Lepisosteus oculatus	54.75	1.00e-99	356.00
IUUC-Laf-054478	Loxodonta africana	81.50	0.00e+00	654.00
IUUC-Mcc-055064	Macaca mulatta	77.03	5.00e-148	517.00
IUUC-Meu-056056	Macropus eugenii	77.00	8.00e-154	536.00
IUUC-Mtr-057979	Medicago truncatula	31.33	3.00e-36	146.00
IUUC-Mga-059908	Meleagris gallopavo	81.50	4.00e-105	374.00
IUUC-Mmr-061235	Microcebus murinus	45.68	2.00e-82	299.00
IUUC-Mdo-063071	Monodelphis domestica	95.50	0.00e+00	757.00
IUUC-Mmu-063446	Mus musculus	76.75	6.00e-164	569.00
IUUC-Mac-065493	Musa acuminata	31.23	6.00e-39	154.00
IUUC-Mpu-065810	Mustela putorius furo	78.30	2.00e-159	555.00
IUUC-Mlu-067707	Myotis lucifugus	47.37	6.00e-81	294.00
IUUC-Nle-069009	Nomascus leucogenys	78.75	0.00e+00	630.00
IUUC-Ont-071863	Oreochromis niloticus	56.41	3.00e-85	308.00
IUUC-Oan-073490	Ornithorhynchus anatinus	82.50	5.00e-180	623.00
IUUC-Ocu-074346	Oryctolagus cuniculus	80.50	2.00e-177	615.00
IUUC-Oba-075245	Oryza barthii	32.59	1.00e-27	116.00
IUUC-Obr-076737	Oryza brachyantha	30.94	2.00e-21	95.50
IUUC-Ogl-077684	Oryza glaberrima	30.85	2.00e-33	136.00
IUUC-Ogu-078859	Oryza glumaepatula	30.85	2.00e-33	136.00
IUUC-Oin-079424	Oryza indica	30.51	4.00e-33	135.00
IUUC-Ome-081614	Oryza meridionalis	29.59	3.00e-27	116.00
IUUC-Oni-082296	Oryza nivara	29.59	7.00e-28	118.00
IUUC-Opu-083546	Oryza punctata	29.59	1.00e-27	117.00
IUUC-Oru-085138	Oryza rufipogon	31.16	5.00e-32	132.00
IUUC-Osa-085729	Oryza sativa	30.85	1.00e-33	137.00
IUUC-Ola-086809	Oryzias latipes	56.66	7.00e-82	297.00
IUUC-Olu-087799	Ostreococcus lucimarinus	32.17	2.00e-11	61.20
IUUC-Oga-087950	Otolemur garnettii	79.75	3.00e-176	610.00
IUUC-Oar-089816	Ovis aries	81.50	0.00e+00	628.00
IUUC-Ptr-090736	Pan troglodytes	79.75	0.00e+00	635.00
IUUC-Pan-092883	Papio anubis	47.37	2.00e-80	292.00
IUUC-Psi-093766	Pelodiscus sinensis	81.85	3.00e-137	481.00
IUUC-Ppa-095990	Physcomitrella patens	29.75	1.00e-34	140.00
IUUC-Pfo-097090	Poecilia formosa	58.05	3.00e-79	288.00
IUUC-Pab-098474	Pongo abelii	80.50	0.00e+00	635.00
IUUC-Pop-098860	Populus trichocarpa	32.00	3.00e-37	149.00
IUUC-Pca-100864	Procavia capensis	74.39	1.00e-105	376.00
IUUC-Ppe-101186	Prunus persica	30.83	3.00e-27	115.00
IUUC-Pva-102165	Pteropus vampyrus	44.92	3.00e-81	295.00
IUUC-Rno-105126	Rattus norvegicus	77.00	1.00e-166	578.00
IUUC-Smo-109495	Selaginella moellendorffii	30.33	3.00e-36	145.00
IUUC-Sit-110120	Setaria italica	31.86	2.00e-33	137.00
IUUC-Sly-111923	Solanum lycopersicum	30.17	1.00e-34	140.00
IUUC-Stu-112700	Solanum tuberosum	30.57	3.00e-29	122.00
IUUC-Sar-113494	Sorex araneus	68.04	7.00e-56	211.00
IUUC-Sbi-114889	Sorghum bicolor	30.13	4.00e-28	119.00
IUUC-Ssc-116039	Sus scrofa	78.26	2.00e-139	488.00
IUUC-Tgu-117409	Taeniopygia guttata	81.21	2.00e-127	447.00
IUUC-Tru-117926	Takifugu rubripes	54.17	3.00e-80	291.00
IUUC-Tsy-118995	Tarsius syrichta	78.50	1.00e-171	595.00
IUUC-Tni-120361	Tetraodon nigroviridis	56.13	7.00e-87	313.00
IUUC-Tca-121544	Theobroma cacao	29.43	8.00e-38	150.00
IUUC-Tae-124755	Triticum aestivum	29.67	5.00e-35	142.00
IUUC-Tur-126400	Triticum urartu	27.40	5.00e-29	122.00
IUUC-Tbe-128158	Tupaia belangeri	61.75	2.00e-121	428.00
IUUC-Ttr-128496	Tursiops truncatus	79.25	2.00e-176	611.00
IUUC-Vpa-130045	Vicugna pacos	84.69	2.00e-46	179.00
IUUC-Vvi-131323	Vitis vinifera	32.89	8.00e-32	131.00
IUUC-Xtr-132923	Xenopus tropicalis	56.50	3.00e-109	388.00
IUUC-Xma-134146	Xiphophorus maculatus	59.40	2.00e-84	305.00
IUUC-Zma-135198	Zea mays	30.57	6.00e-37	148.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence