iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048071

Ensembl Protein ID

ENSSTOP00000002862.2

UniProt Accession

I3M1U9; I3M1U9_ICTTR

Genbank Protein ID

ENSSTOP00000002862

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01100025

Gene Name

ERCC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000003183.2	ENSSTOT00000003205.2	ENSSTOP00000002862.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	82.08	0.00e+00	2332.00	IUUC-Hsa-046895
UBD/Alpha-Helix/UBA	82.08	0.00e+00	2332.00	IUUC-Hsa-046895

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MPNEEISHST QTQEQDCLQR QHISTNEESS TEQKNDGDAE KKEHLPSPFS DFGPSTSTEG 60
CTSAAARRGP ALLHIDRHQI PAVEPSAQAL ELQGLGVDVY DQAVLEQGVL QQVDSAILEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAAATG AAGAAATCTC TCACTCAACT CAAACTCAGG AGCAAGACTG TTTACAGAGA 60
CAACATATTA GTACTAATGA AGAATCATCA ACTGAGCAAA AAAATGATGG GGATGCAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005829--C:cytosol
GO:0005794--C:Golgi apparatus
GO:0005730--C:nucleolus
GO:0008023--C:transcription elongation factor complex
GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0003677--F:DNA binding
GO:0008094--F:DNA-dependent ATPase activity
GO:0030296--F:protein tyrosine kinase activator activity
GO:0007256--P:activation of JNKK activity
GO:0007257--P:activation of JUN kinase activity
GO:0006284--P:base-excision repair
GO:0008630--P:intrinsic apoptotic signaling pathway in response to DNA damage
GO:0035264--P:multicellular organism growth
GO:0045494--P:photoreceptor cell maintenance
GO:0032786--P:positive regulation of DNA-templated transcription, elongation
GO:0006290--P:pyrimidine dimer repair
GO:0010332--P:response to gamma radiation
GO:0000303--P:response to superoxide
GO:0009636--P:response to toxic substance
GO:0010224--P:response to UV-B
GO:0010165--P:response to X-ray
GO:0006362--P:transcription elongation from RNA polymerase I promoter
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000518	Aegilops tauschii	52.31	0.00e+00	640.00
IUUC-Aml-002021	Ailuropoda melanoleuca	79.48	0.00e+00	2241.00
IUUC-Atr-002868	Amborella trichopoda	52.55	0.00e+00	629.00
IUUC-Apl-003989	Anas platyrhynchos	64.61	0.00e+00	1785.00
IUUC-Aca-004609	Anolis carolinensis	70.17	0.00e+00	1325.00
IUUC-Aly-005912	Arabidopsis lyrata	50.00	0.00e+00	630.00
IUUC-Ath-006812	Arabidopsis thaliana	46.98	3.00e-180	625.00
IUUC-Ago-007719	Ashbya gossypii	51.69	1.00e-178	620.00
IUUC-Acl-008050	Aspergillus clavatus	50.96	7.00e-179	621.00
IUUC-Afl-008677	Aspergillus flavus	51.42	1.00e-170	593.00
IUUC-Afu-008975	Aspergillus fumigatus	51.60	3.00e-178	619.00
IUUC-Ani-009464	Aspergillus nidulans	50.72	1.00e-177	617.00
IUUC-Ang-009516	Aspergillus niger	49.69	2.00e-167	583.00
IUUC-Aor-010057	Aspergillus oryzae	51.31	1.00e-172	600.00
IUUC-Ate-010307	Aspergillus terreus	50.31	1.00e-169	590.00
IUUC-Ame-011055	Astyanax mexicanus	79.13	0.00e+00	1058.00
IUUC-Bgr-012211	Blumeria graminis	49.76	3.00e-167	582.00
IUUC-Bta-012761	Bos taurus	75.20	0.00e+00	2043.00
IUUC-Bci-013603	Botrytis cinerea	51.37	0.00e+00	635.00
IUUC-Bdi-014031	Brachypodium distachyon	51.61	0.00e+00	638.00
IUUC-Bol-015096	Brassica oleracea	52.94	0.00e+00	637.00
IUUC-Bra-017583	Brassica rapa	53.27	0.00e+00	630.00
IUUC-Cel-018275	Caenorhabditis elegans	35.63	3.00e-105	376.00
IUUC-Cja-019733	Callithrix jacchus	84.56	0.00e+00	1736.00
IUUC-Cfa-020631	Canis familiaris	79.34	0.00e+00	2197.00
IUUC-Cpo-022218	Cavia porcellus	77.05	0.00e+00	1538.00
IUUC-Cre-022710	Chlamydomonas reinhardtii	49.11	7.00e-153	535.00
IUUC-Csa-023723	Chlorocebus sabaeus	80.68	0.00e+00	2282.00
IUUC-Cho-024312	Choloepus hoffmanni	75.42	0.00e+00	947.00
IUUC-Cin-025376	Ciona intestinalis	53.23	0.00e+00	827.00
IUUC-Cgl-026654	Colletotrichum gloeosporioides	49.34	1.00e-163	570.00
IUUC-Cme-027109	Cyanidioschyzon merolae	51.64	2.00e-156	546.00
IUUC-Dre-028672	Danio rerio	59.82	0.00e+00	1175.00
IUUC-Dno-028893	Dasypus novemcinctus	77.18	0.00e+00	2092.00
IUUC-Dor-031114	Dipodomys ordii	70.64	0.00e+00	1876.00
IUUC-Dse-031225	Dothistroma septosporum	49.76	0.00e+00	628.00
IUUC-Ete-032713	Echinops telfairi	70.06	0.00e+00	939.00
IUUC-Eca-034071	Equus caballus	78.52	0.00e+00	2188.00
IUUC-Eeu-034781	Erinaceus europaeus	78.02	0.00e+00	1671.00
IUUC-Fca-036561	Felis catus	79.33	0.00e+00	2179.00
IUUC-Fal-037343	Ficedula albicollis	62.03	0.00e+00	1661.00
IUUC-Fox-037667	Fusarium oxysporum	48.92	9.00e-157	547.00
IUUC-Fso-038331	Fusarium solani	49.19	1.00e-159	557.00
IUUC-Gmo-039132	Gadus morhua	71.67	0.00e+00	968.00
IUUC-Gga-040376	Gallus gallus	65.54	0.00e+00	1793.00
IUUC-Gac-042326	Gasterosteus aculeatus	75.37	0.00e+00	966.00
IUUC-Gma-043401	Glycine max	48.06	0.00e+00	628.00
IUUC-Ggo-044844	Gorilla gorilla	81.75	0.00e+00	2308.00
IUUC-Hsa-046895	Homo sapiens	81.81	0.00e+00	2315.00
IUUC-Kpa-049261	Komagataella pastoris	49.92	0.00e+00	660.00
IUUC-Lch-049934	Latimeria chalumnae	70.26	0.00e+00	1209.00
IUUC-Lpe-051249	Leersia perrieri	48.91	2.00e-147	516.00
IUUC-Loc-052591	Lepisosteus oculatus	61.51	0.00e+00	1523.00
IUUC-Lma-053210	Leptosphaeria maculans	48.59	5.00e-169	588.00
IUUC-Laf-054403	Loxodonta africana	79.03	0.00e+00	2174.00
IUUC-Mcc-054876	Macaca mulatta	80.97	0.00e+00	2323.00
IUUC-Meu-056545	Macropus eugenii	62.21	7.00e-136	478.00
IUUC-Mor-057145	Magnaporthe oryzae	44.08	2.00e-172	599.00
IUUC-Mpo-057493	Magnaporthe poae	44.21	3.00e-170	592.00
IUUC-Mtr-057734	Medicago truncatula	47.77	9.00e-180	624.00
IUUC-Mga-059402	Meleagris gallopavo	65.16	0.00e+00	1790.00
IUUC-Mmr-061791	Microcebus murinus	81.87	0.00e+00	2322.00
IUUC-Mdo-062148	Monodelphis domestica	69.16	0.00e+00	1875.00
IUUC-Mmu-063238	Mus musculus	78.66	0.00e+00	2211.00
IUUC-Mac-064440	Musa acuminata	51.36	1.00e-171	596.00
IUUC-Mpu-066112	Mustela putorius furo	79.95	0.00e+00	2239.00
IUUC-Mlu-067057	Myotis lucifugus	78.89	0.00e+00	2172.00
IUUC-Nfi-068617	Neosartorya fischeri	51.44	4.00e-179	622.00
IUUC-Ncr-068920	Neurospora crassa	49.51	2.00e-172	600.00
IUUC-Nle-069992	Nomascus leucogenys	81.80	0.00e+00	2313.00
IUUC-Opr-070929	Ochotona princeps	72.52	0.00e+00	1772.00
IUUC-Ont-071740	Oreochromis niloticus	83.85	0.00e+00	1018.00
IUUC-Oan-073380	Ornithorhynchus anatinus	68.18	0.00e+00	847.00
IUUC-Ocu-074143	Oryctolagus cuniculus	73.62	0.00e+00	1967.00
IUUC-Oba-075626	Oryza barthii	52.17	2.00e-178	619.00
IUUC-Obr-076240	Oryza brachyantha	51.74	0.00e+00	634.00
IUUC-Ogl-077187	Oryza glaberrima	52.17	2.00e-178	620.00
IUUC-Ogu-078629	Oryza glumaepatula	49.31	6.00e-143	501.00
IUUC-Oin-079268	Oryza indica	52.34	1.00e-178	620.00
IUUC-Olo-080567	Oryza longistaminata	48.71	4.00e-143	502.00
IUUC-Oni-082122	Oryza nivara	52.34	1.00e-178	620.00
IUUC-Opu-083477	Oryza punctata	51.99	0.00e+00	632.00
IUUC-Oru-084783	Oryza rufipogon	52.34	1.00e-178	620.00
IUUC-Osa-086206	Oryza sativa	52.34	3.00e-177	615.00
IUUC-Oga-088414	Otolemur garnettii	79.36	0.00e+00	2237.00
IUUC-Oar-089697	Ovis aries	78.47	0.00e+00	2204.00
IUUC-Ptr-090856	Pan troglodytes	81.75	0.00e+00	2313.00
IUUC-Pan-092521	Papio anubis	81.01	0.00e+00	2315.00
IUUC-Psi-093037	Pelodiscus sinensis	66.80	0.00e+00	1586.00
IUUC-Pma-094456	Petromyzon marinus	67.00	0.00e+00	837.00
IUUC-Pno-094861	Phaeosphaeria nodorum	48.70	4.00e-170	592.00
IUUC-Ppa-095711	Physcomitrella patens	49.92	0.00e+00	632.00
IUUC-Pfo-096223	Poecilia formosa	67.24	0.00e+00	1260.00
IUUC-Pab-098595	Pongo abelii	81.28	0.00e+00	2288.00
IUUC-Pop-099531	Populus trichocarpa	52.22	0.00e+00	634.00
IUUC-Pca-100770	Procavia capensis	76.80	0.00e+00	763.00
IUUC-Ppe-101528	Prunus persica	48.23	0.00e+00	629.00
IUUC-Pva-102247	Pteropus vampyrus	74.82	0.00e+00	1171.00
IUUC-Pte-104217	Pyrenophora teres	50.00	7.00e-171	594.00
IUUC-Pyt-104797	Pyrenophora triticirepentis	49.35	2.00e-172	600.00
IUUC-Rno-105742	Rattus norvegicus	77.41	0.00e+00	2137.00
IUUC-Sce-106234	Saccharomyces cerevisiae	50.24	0.00e+00	629.00
IUUC-Sha-106622	Sarcophilus harrisii	66.87	0.00e+00	1816.00
IUUC-Sja-107874	Schizosaccharomyces japonicus	51.10	0.00e+00	649.00
IUUC-Spo-108021	Schizosaccharomyces pombe	48.83	0.00e+00	655.00
IUUC-Ssl-108500	Sclerotinia sclerotiorum	51.85	0.00e+00	630.00
IUUC-Smo-109132	Selaginella moellendorffii	51.79	2.00e-175	609.00
IUUC-Sit-110066	Setaria italica	52.58	0.00e+00	635.00
IUUC-Sly-111833	Solanum lycopersicum	52.94	0.00e+00	640.00
IUUC-Stu-112189	Solanum tuberosum	49.07	0.00e+00	637.00
IUUC-Sar-113511	Sorex araneus	72.24	0.00e+00	1169.00
IUUC-Sbi-114606	Sorghum bicolor	52.58	0.00e+00	634.00
IUUC-Ssc-116374	Sus scrofa	79.46	0.00e+00	2279.00
IUUC-Tgu-117153	Taeniopygia guttata	59.92	0.00e+00	1555.00
IUUC-Tru-118178	Takifugu rubripes	62.05	0.00e+00	1227.00
IUUC-Tsy-119524	Tarsius syrichta	80.44	0.00e+00	2269.00
IUUC-Tni-120546	Tetraodon nigroviridis	65.98	0.00e+00	1210.00
IUUC-Tca-121065	Theobroma cacao	51.72	0.00e+00	634.00
IUUC-Tre-121868	Trichoderma reesei	49.01	3.00e-161	562.00
IUUC-Tvi-122455	Trichoderma virens	48.84	4.00e-158	551.00
IUUC-Tae-123249	Triticum aestivum	52.42	0.00e+00	638.00
IUUC-Tur-126107	Triticum urartu	53.37	0.00e+00	639.00
IUUC-Tbe-127967	Tupaia belangeri	77.87	0.00e+00	1049.00
IUUC-Ttr-128768	Tursiops truncatus	79.28	0.00e+00	2264.00
IUUC-Vda-129884	Verticillium dahliae	49.75	2.00e-174	606.00
IUUC-Vpa-130521	Vicugna pacos	82.60	0.00e+00	1097.00
IUUC-Vvi-130838	Vitis vinifera	51.29	1.00e-178	620.00
IUUC-Xtr-132056	Xenopus tropicalis	56.99	0.00e+00	1104.00
IUUC-Xma-133113	Xiphophorus maculatus	58.24	0.00e+00	1140.00
IUUC-Yli-134344	Yarrowia lipolytica	52.95	0.00e+00	641.00
IUUC-Zma-134837	Zea mays	51.12	2.00e-179	622.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence