iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000015859.1	ENSORLT00000019862.1	ENSORLP00000019861.1
ENSORLG00000015859.1	ENSORLT00000019863.1	ENSORLP00000019862.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-14	52.8	60	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tl.lvsGsdDgtikvWDlrtgv 34
           gH++++t++   d t+ l+sG+ Dg i +WD+ tg 
   Q: 60   GHSGGITAIYI-DqTMvLASGGQDGAICLWDVLTGS 94
           8********88.446648*************98885 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

PCYTSEDVIS CQLTRSVQCA HQKPITVLRA AAGRVVTGSQ DHTVRVYRLE DSCCLFTLQG 60
HSGGITAIYI DQTMVLASGG QDGAICLWDV LTGSRVSHVY GHRGDVTSLV CTTSCVISSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGGATCCT TGGATTTCTT CACGGTGGAG ATCAACAAAC CTCTGGCTCT GCTGCAGTAC 60
AGAGGTGAGA CTTCTCCTTT AGTTTGCTTT GTGATCTTAA CTTTGTTTGT TTAGGGGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030225--SCAP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0000139--C:Golgi membrane
GO:0015485--F:cholesterol binding
GO:0008203--P:cholesterol metabolic process
GO:0032933--P:SREBP signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001802	Ailuropoda melanoleuca	85.65	2.00e-110	394.00
IUUC-Apl-003294	Anas platyrhynchos	84.91	7.00e-107	382.00
IUUC-Aca-004424	Anolis carolinensis	79.73	5.00e-99	356.00
IUUC-Bta-013478	Bos taurus	85.51	4.00e-109	389.00
IUUC-Cja-019123	Callithrix jacchus	84.72	9.00e-109	388.00
IUUC-Cfa-021082	Canis familiaris	86.32	2.00e-108	387.00
IUUC-Cpo-022477	Cavia porcellus	84.26	1.00e-100	361.00
IUUC-Csa-023176	Chlorocebus sabaeus	85.19	4.00e-109	389.00
IUUC-Cin-025490	Ciona intestinalis	39.64	6.00e-42	166.00
IUUC-Csv-026115	Ciona savignyi	39.46	4.00e-42	167.00
IUUC-Dre-028008	Danio rerio	93.67	3.00e-120	426.00
IUUC-Dno-028887	Dasypus novemcinctus	83.78	1.00e-111	398.00
IUUC-Dor-030467	Dipodomys ordii	82.72	4.00e-36	147.00
IUUC-Dme-032087	Drosophila melanogaster	38.35	1.00e-33	138.00
IUUC-Ete-032372	Echinops telfairi	82.43	5.00e-109	389.00
IUUC-Eca-033896	Equus caballus	84.23	7.00e-112	398.00
IUUC-Eeu-035099	Erinaceus europaeus	81.53	2.00e-99	357.00
IUUC-Fca-035616	Felis catus	85.19	2.00e-109	390.00
IUUC-Fal-037231	Ficedula albicollis	83.26	2.00e-105	377.00
IUUC-Gmo-039439	Gadus morhua	92.79	8.00e-119	421.00
IUUC-Gac-041516	Gasterosteus aculeatus	97.30	6.00e-124	439.00
IUUC-Hsa-046674	Homo sapiens	85.19	3.00e-109	390.00
IUUC-Itr-048879	Ictidomys tridecemlineatus	84.72	1.00e-108	388.00
IUUC-Lch-049689	Latimeria chalumnae	83.78	7.00e-112	399.00
IUUC-Loc-051906	Lepisosteus oculatus	96.64	3.00e-78	283.00
IUUC-Laf-053795	Loxodonta africana	84.23	3.00e-111	396.00
IUUC-Mcc-055502	Macaca mulatta	83.78	7.00e-111	395.00
IUUC-Mga-059805	Meleagris gallopavo	84.72	3.00e-108	386.00
IUUC-Mmr-060997	Microcebus murinus	83.78	3.00e-111	396.00
IUUC-Mdo-062940	Monodelphis domestica	84.68	5.00e-99	356.00
IUUC-Mmu-063255	Mus musculus	82.87	3.00e-106	380.00
IUUC-Mpu-066158	Mustela putorius furo	86.79	5.00e-109	389.00
IUUC-Mlu-067201	Myotis lucifugus	84.23	2.00e-112	400.00
IUUC-Nle-069145	Nomascus leucogenys	85.19	2.00e-109	390.00
IUUC-Opr-070797	Ochotona princeps	84.72	5.00e-109	389.00
IUUC-Ont-071553	Oreochromis niloticus	97.30	5.00e-123	436.00
IUUC-Ocu-074598	Oryctolagus cuniculus	84.72	5.00e-109	389.00
IUUC-Oar-089287	Ovis aries	85.92	4.00e-109	389.00
IUUC-Pan-092004	Papio anubis	84.47	1.00e-103	371.00
IUUC-Psi-093028	Pelodiscus sinensis	66.67	9.00e-45	176.00
IUUC-Pma-094145	Petromyzon marinus	58.88	3.00e-73	270.00
IUUC-Pfo-096320	Poecilia formosa	96.40	6.00e-122	432.00
IUUC-Pab-097862	Pongo abelii	85.19	2.00e-109	390.00
IUUC-Pca-100862	Procavia capensis	83.89	1.00e-73	271.00
IUUC-Pva-103050	Pteropus vampyrus	83.78	3.00e-111	397.00
IUUC-Rno-105852	Rattus norvegicus	84.72	6.00e-109	389.00
IUUC-Sha-107312	Sarcophilus harrisii	84.68	2.00e-97	350.00
IUUC-Sar-113311	Sorex araneus	84.68	3.00e-111	396.00
IUUC-Ssc-116356	Sus scrofa	86.32	3.00e-108	386.00
IUUC-Tgu-116896	Taeniopygia guttata	75.00	1.00e-16	82.40
IUUC-Tru-118197	Takifugu rubripes	97.30	9.00e-124	438.00
IUUC-Tni-119823	Tetraodon nigroviridis	93.69	2.00e-121	430.00
IUUC-Ttr-129164	Tursiops truncatus	85.19	1.00e-109	391.00
IUUC-Xtr-132819	Xenopus tropicalis	83.33	7.00e-111	395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence