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Tag Content
iUUCD ID IUUC-Ata-000536
Ensembl Protein ID EMT24316
UniProt Accession M8CLL9; M8CLL9_AEGTA
Genbank Protein ID EMT24316.1
Protein Name TFIIH basal transcription factor complex p47 subunit
Genbank Nucleotide ID KD517979
Gene Name F775_26081
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
F775_26081 EMT24316 EMT24316
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 39.12 6.00e-52 199.00 IUUC-Sce-106434
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Aegilops tauschii
Protein Sequence
(Fasta)
MYGVGVGGGG GGFNAPSTAS GRRKNQEDDE EEEEEETGDG RVLEAWERAY ADDRSWEALQ 60
EDESGLLRPI DTKNLVHSQY RRRLLLRSAA AAARIQKGLI RYLYIVIDLS KAASEMDYRP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ata-000536|E3,RING|Aegilops tauschii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTACGGCG TCGGCGTCGG CGGCGGCGGA GGCGGGTTCA ACGCGCCGTC CACGGCCTCC 60
GGGCGGCGCA AAAACCAGGA GGACGACGAG GAAGAGGAGG AGGAGGAGAC GGGCGACGGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ata-000536|E3,RING|Aegilops tauschii
Please wait for a moment...
Sequence Source Ensembl
Interpro

IPR007198--Ssl1-like
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A

PROSITE

PS50234--VWFA

Pfam

PF04056--Ssl1

SMART

SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG ats:F775_26081
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002041 Ailuropoda melanoleuca 36.10 1.00e-51 196.00
IUUC-Atr-003056 Amborella trichopoda 70.13 7.00e-97 346.00
IUUC-Apl-003464 Anas platyrhynchos 36.70 2.00e-43 169.00
IUUC-Aca-004745 Anolis carolinensis 38.02 2.00e-57 215.00
IUUC-Aly-005559 Arabidopsis lyrata 69.25 4.00e-115 407.00
IUUC-Ath-007556 Arabidopsis thaliana 69.25 4.00e-115 407.00
IUUC-Ago-007851 Ashbya gossypii 39.12 8.00e-55 207.00
IUUC-Acl-008100 Aspergillus clavatus 35.71 2.00e-49 189.00
IUUC-Afl-008649 Aspergillus flavus 36.23 3.00e-11 58.90
IUUC-Afu-009066 Aspergillus fumigatus 35.31 2.00e-51 196.00
IUUC-Ani-009372 Aspergillus nidulans 36.36 7.00e-51 194.00
IUUC-Ang-009726 Aspergillus niger 35.37 2.00e-53 202.00
IUUC-Aor-010135 Aspergillus oryzae 36.39 4.00e-51 194.00
IUUC-Ate-010399 Aspergillus terreus 32.26 1.00e-18 85.10
IUUC-Ame-011618 Astyanax mexicanus 38.41 1.00e-56 212.00
IUUC-Bgr-012154 Blumeria graminis 35.88 3.00e-48 185.00
IUUC-Bta-012353 Bos taurus 36.10 2.00e-55 209.00
IUUC-Bci-013932 Botrytis cinerea 38.87 6.00e-51 194.00
IUUC-Bdi-014391 Brachypodium distachyon 94.69 1.00e-153 535.00
IUUC-Bol-015128 Brassica oleracea 73.51 4.00e-117 414.00
IUUC-Bra-017932 Brassica rapa 73.51 4.00e-117 414.00
IUUC-Cel-018649 Caenorhabditis elegans 36.60 1.00e-42 166.00
IUUC-Cja-018776 Callithrix jacchus 35.46 3.00e-51 194.00
IUUC-Cfa-020584 Canis familiaris 35.78 2.00e-51 195.00
IUUC-Cpo-021300 Cavia porcellus 36.10 1.00e-51 196.00
IUUC-Cre-022657 Chlamydomonas reinhardtii 45.36 3.00e-59 221.00
IUUC-Csa-024092 Chlorocebus sabaeus 35.78 3.00e-51 195.00
IUUC-Cho-024919 Choloepus hoffmanni 39.87 3.00e-27 114.00
IUUC-Cin-025386 Ciona intestinalis 36.28 3.00e-55 207.00
IUUC-Csv-026295 Ciona savignyi 36.42 3.00e-51 194.00
IUUC-Cgl-026612 Colletotrichum gloeosporioides 36.46 3.00e-45 175.00
IUUC-Cne-026956 Cryptococcus neoformans 35.48 7.00e-48 184.00
IUUC-Cme-027150 Cyanidioschyzon merolae 33.86 2.00e-35 142.00
IUUC-Dre-027962 Danio rerio 38.98 1.00e-57 216.00
IUUC-Dno-029979 Dasypus novemcinctus 36.74 5.00e-47 181.00
IUUC-Dse-031405 Dothistroma septosporum 42.00 6.00e-52 197.00
IUUC-Dme-031710 Drosophila melanogaster 33.78 1.00e-48 186.00
IUUC-Ete-032631 Echinops telfairi 32.91 9.00e-45 173.00
IUUC-Eca-034054 Equus caballus 36.74 3.00e-55 208.00
IUUC-Fca-035724 Felis catus 33.87 1.00e-47 183.00
IUUC-Fal-036987 Ficedula albicollis 36.74 1.00e-54 206.00
IUUC-Fox-037692 Fusarium oxysporum 37.67 2.00e-53 202.00
IUUC-Fso-038442 Fusarium solani 38.03 3.00e-52 198.00
IUUC-Gmo-039273 Gadus morhua 39.56 5.00e-59 221.00
IUUC-Ggr-040009 Gaeumannomyces graminis 38.66 5.00e-47 181.00
IUUC-Gga-041089 Gallus gallus 36.42 6.00e-55 207.00
IUUC-Gac-041978 Gasterosteus aculeatus 42.35 5.00e-55 207.00
IUUC-Gma-043371 Glycine max 76.57 1.00e-133 468.00
IUUC-Hsa-046001 Homo sapiens 35.78 5.00e-51 194.00
IUUC-Itr-048355 Ictidomys tridecemlineatus 36.10 7.00e-52 197.00
IUUC-Kpa-049235 Komagataella pastoris 41.47 1.00e-58 219.00
IUUC-Lch-049926 Latimeria chalumnae 37.14 4.00e-50 191.00
IUUC-Lpe-051352 Leersia perrieri 90.43 8.00e-146 509.00
IUUC-Loc-051987 Lepisosteus oculatus 38.02 2.00e-56 211.00
IUUC-Lma-053171 Leptosphaeria maculans 35.50 2.00e-44 173.00
IUUC-Laf-054372 Loxodonta africana 36.42 2.00e-55 209.00
IUUC-Mcc-055108 Macaca mulatta 35.78 3.00e-51 195.00
IUUC-Mor-056990 Magnaporthe oryzae 39.39 1.00e-50 193.00
IUUC-Mpo-057587 Magnaporthe poae 26.92 2.50e-02 32.00
IUUC-Mtr-058401 Medicago truncatula 70.81 6.00e-130 456.00
IUUC-Mla-059186 Melampsora laricipopulina 42.18 3.00e-63 234.00
IUUC-Mvi-060262 Microbotryum violaceum 35.96 2.00e-55 209.00
IUUC-Mmr-061688 Microcebus murinus 36.62 7.00e-39 153.00
IUUC-Mdo-062154 Monodelphis domestica 35.78 2.00e-51 195.00
IUUC-Mmu-064232 Mus musculus 35.35 3.00e-50 191.00
IUUC-Mac-065091 Musa acuminata 76.00 2.00e-125 441.00
IUUC-Mpu-066747 Mustela putorius furo 33.02 1.00e-38 153.00
IUUC-Mlu-067799 Myotis lucifugus 38.85 4.00e-50 191.00
IUUC-Nfi-068371 Neosartorya fischeri 37.50 2.00e-13 67.80
IUUC-Ncr-068704 Neurospora crassa 38.33 3.00e-54 205.00
IUUC-Nle-069054 Nomascus leucogenys 35.78 2.00e-51 195.00
IUUC-Ont-071624 Oreochromis niloticus 44.09 5.00e-58 217.00
IUUC-Oan-072898 Ornithorhynchus anatinus 36.10 4.00e-51 194.00
IUUC-Ocu-074289 Oryctolagus cuniculus 36.45 5.00e-52 197.00
IUUC-Oba-075985 Oryza barthii 83.70 1.00e-145 509.00
IUUC-Obr-076887 Oryza brachyantha 83.80 2.00e-146 511.00
IUUC-Ogl-077823 Oryza glaberrima 83.70 1.00e-145 509.00
IUUC-Ogu-078412 Oryza glumaepatula 83.38 3.00e-148 517.00
IUUC-Oin-079569 Oryza indica 86.83 6.00e-163 566.00
IUUC-Olo-080249 Oryza longistaminata 87.25 4.00e-148 517.00
IUUC-Ome-081240 Oryza meridionalis 83.38 1.00e-148 519.00
IUUC-Oni-082152 Oryza nivara 83.38 2.00e-148 517.00
IUUC-Opu-084011 Oryza punctata 84.49 2.00e-149 521.00
IUUC-Oru-084719 Oryza rufipogon 83.66 1.00e-148 518.00
IUUC-Osa-085286 Oryza sativa 83.10 5.00e-147 513.00
IUUC-Ola-086525 Oryzias latipes 42.08 8.00e-50 190.00
IUUC-Olu-087876 Ostreococcus lucimarinus 43.04 1.00e-62 233.00
IUUC-Oga-088125 Otolemur garnettii 36.10 8.00e-54 203.00
IUUC-Oar-089701 Ovis aries 36.10 3.00e-55 208.00
IUUC-Ptr-091218 Pan troglodytes 35.46 4.00e-51 194.00
IUUC-Pan-091755 Papio anubis 35.78 3.00e-51 195.00
IUUC-Psi-094061 Pelodiscus sinensis 36.10 3.00e-51 195.00
IUUC-Pma-094430 Petromyzon marinus 41.43 5.00e-55 206.00
IUUC-Pno-094900 Phaeosphaeria nodorum 40.68 1.00e-10 61.20
IUUC-Ppa-095895 Physcomitrella patens 58.28 9.00e-107 379.00
IUUC-Pfo-096297 Poecilia formosa 43.82 4.00e-56 210.00
IUUC-Pab-097717 Pongo abelii 35.78 3.00e-51 195.00
IUUC-Pop-098938 Populus trichocarpa 74.00 4.00e-114 403.00
IUUC-Pca-100389 Procavia capensis 34.85 7.00e-44 170.00
IUUC-Ppe-102045 Prunus persica 73.68 5.00e-115 407.00
IUUC-Pva-102357 Pteropus vampyrus 38.58 2.00e-14 72.00
IUUC-Pgr-103399 Puccinia graminis 40.88 4.00e-60 224.00
IUUC-Ptt-103872 Puccinia triticina 41.75 5.00e-60 224.00
IUUC-Pte-104092 Pyrenophora teres 36.92 7.00e-48 184.00
IUUC-Pyt-104669 Pyrenophora triticirepentis 37.31 7.00e-48 184.00
IUUC-Rno-105515 Rattus norvegicus 36.31 2.00e-54 205.00
IUUC-Sce-106434 Saccharomyces cerevisiae 39.12 2.00e-56 212.00
IUUC-Sha-106808 Sarcophilus harrisii 35.46 2.00e-50 191.00
IUUC-Sja-107995 Schizosaccharomyces japonicus 38.91 1.00e-49 189.00
IUUC-Spo-108044 Schizosaccharomyces pombe 39.59 6.00e-58 217.00
IUUC-Smo-109581 Selaginella moellendorffii 55.86 7.00e-94 336.00
IUUC-Sit-110704 Setaria italica 84.87 4.00e-146 510.00
IUUC-Sly-110990 Solanum lycopersicum 68.75 3.00e-90 324.00
IUUC-Stu-112542 Solanum tuberosum 72.40 9.00e-90 322.00
IUUC-Sar-113766 Sorex araneus 35.17 1.00e-44 172.00
IUUC-Sbi-114016 Sorghum bicolor 83.75 2.00e-142 497.00
IUUC-Sre-115099 Sporisorium reilianum 36.86 3.00e-52 199.00
IUUC-Ssc-115277 Sus scrofa 35.78 1.00e-51 196.00
IUUC-Tgu-117343 Taeniopygia guttata 37.38 2.00e-54 206.00
IUUC-Tru-118397 Takifugu rubripes 42.69 6.00e-56 210.00
IUUC-Tni-120272 Tetraodon nigroviridis 41.76 7.00e-54 203.00
IUUC-Tca-121514 Theobroma cacao 75.41 6.00e-131 459.00
IUUC-Tre-121990 Trichoderma reesei 39.20 6.00e-53 201.00
IUUC-Tvi-122504 Trichoderma virens 40.96 7.00e-51 193.00
IUUC-Tae-123153 Triticum aestivum 99.40 2.00e-158 551.00
IUUC-Tur-126693 Triticum urartu 86.32 1.00e-150 524.00
IUUC-Tme-127011 Tuber melanosporum 38.61 1.00e-52 199.00
IUUC-Tbe-127939 Tupaia belangeri 35.78 2.00e-51 195.00
IUUC-Ttr-128889 Tursiops truncatus 36.12 7.00e-50 190.00
IUUC-Uma-129450 Ustilago maydis 35.74 6.00e-52 197.00
IUUC-Vda-129919 Verticillium dahliae 37.50 7.00e-46 177.00
IUUC-Vvi-130928 Vitis vinifera 76.24 1.00e-120 425.00
IUUC-Xtr-131891 Xenopus tropicalis 31.45 1.00e-42 166.00
IUUC-Xma-133260 Xiphophorus maculatus 43.03 3.00e-55 207.00
IUUC-Yli-134578 Yarrowia lipolytica 41.41 8.00e-51 194.00
IUUC-Zma-135427 Zea mays 89.72 2.00e-140 491.00
Created Date 25-Jun-2017

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