iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052101

Ensembl Protein ID

ENSLOCP00000006135.1

UniProt Accession

W5MCM6; W5MCM6_LEPOC

Genbank Protein ID

ENSLOCP00000006135

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01024963

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000005093.1	ENSLOCT00000006143.1	ENSLOCP00000006135.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-41	138.2	187	218
UBD/Beta-Prp	7.80e-75	252.0	14	198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH + v+c++f  s ++l+sGs+D t++vW +r
   Q: 187  GHRGNVSCVCFsvS-GMLASGSWDRTVRVWHPR 218
           8**********744.***************865 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
           ++ +  h++e +++ fspd +il+t+s+D  i +w+  tg+ + +++gh+  v s+ fsp+   ++s shdrt+rvw++ t qcl+ +l
   Q: 14   VKYFARHKGELNSCVFSPDCQILLTCSDDCRIFLWNAATGQLLAKVTGHTGPVKSCVFSPDCTLFASSSHDRTVRVWHTATTQCLR-VL 101
           566789******************************************************99************************.** PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght 222
           +gh+++v +v+++pd++ l sG+ D+t  lWd++tg++ r ++g h+++++   f+ n++++++gs d tvk+w+l+++e  +tl+gh+
   Q: 102  TGHSKSVETVCFSPDAKWLLSGGWDKTAILWDVQTGEIARIFSG-HQGAIQTSMFSLNSQYVATGSWDYTVKVWSLRAQEREKTLEGHR 189
           *******************************************9.******************************************** PP
   S: 223  dnvksvrfs 231
            nv++v fs
   Q: 190  GNVSCVCFS 198
           *****9875 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MWQSPSEDLT RTGVKYFARH KGELNSCVFS PDCQILLTCS DDCRIFLWNA ATGQLLAKVT 60
GHTGPVKSCV FSPDCTLFAS SSHDRTVRVW HTATTQCLRV LTGHSKSVET VCFSPDAKWL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATTTGAAT GAACGAAGAC TTGCCTACTG TACTTCCCAG ATACCAGTCT GTGCTATCAT 60
CGAAGAGGCT GGTTAAAGTA CAGCGCTGTT ACTGATTAAA ATATCAGGCC GCTATTAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	51.24	2.00e-81	295.00
IUUC-Ang-009841	Aspergillus niger	37.37	2.00e-45	177.00
IUUC-Ame-010858	Astyanax mexicanus	59.66	3.00e-98	351.00
IUUC-Bta-012352	Bos taurus	50.34	2.00e-84	305.00
IUUC-Cja-019585	Callithrix jacchus	51.24	4.00e-84	304.00
IUUC-Cfa-020062	Canis familiaris	47.42	1.00e-69	256.00
IUUC-Csa-023528	Chlorocebus sabaeus	51.59	4.00e-84	304.00
IUUC-Cin-025426	Ciona intestinalis	42.41	2.00e-65	242.00
IUUC-Dre-027740	Danio rerio	56.59	4.00e-62	230.00
IUUC-Dno-030012	Dasypus novemcinctus	45.26	1.00e-78	286.00
IUUC-Dor-030536	Dipodomys ordii	51.95	1.00e-64	239.00
IUUC-Ete-032871	Echinops telfairi	52.56	3.00e-68	251.00
IUUC-Eca-033729	Equus caballus	52.13	1.00e-85	309.00
IUUC-Eeu-034740	Erinaceus europaeus	51.24	3.00e-83	301.00
IUUC-Fca-036514	Felis catus	50.18	2.00e-82	299.00
IUUC-Fox-037862	Fusarium oxysporum	39.18	1.00e-48	189.00
IUUC-Ggo-044793	Gorilla gorilla	48.48	9.00e-82	296.00
IUUC-Hsa-046414	Homo sapiens	52.11	6.00e-83	300.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	49.29	1.00e-72	266.00
IUUC-Lch-049905	Latimeria chalumnae	66.21	4.00e-120	424.00
IUUC-Laf-053443	Loxodonta africana	51.57	3.00e-79	288.00
IUUC-Mcc-055346	Macaca mulatta	51.59	3.00e-84	305.00
IUUC-Meu-056531	Macropus eugenii	59.73	5.00e-74	270.00
IUUC-Mmr-061721	Microcebus murinus	51.03	8.00e-84	303.00
IUUC-Mdo-062379	Monodelphis domestica	54.33	2.00e-91	329.00
IUUC-Mmu-064175	Mus musculus	51.42	9.00e-81	293.00
IUUC-Mpu-066361	Mustela putorius furo	53.00	2.00e-85	308.00
IUUC-Mlu-067300	Myotis lucifugus	40.42	1.00e-49	189.00
IUUC-Nle-070150	Nomascus leucogenys	51.76	2.00e-83	302.00
IUUC-Opr-071060	Ochotona princeps	45.58	7.00e-61	227.00
IUUC-Ocu-074101	Oryctolagus cuniculus	51.59	4.00e-84	304.00
IUUC-Oga-088479	Otolemur garnettii	51.77	1.00e-82	299.00
IUUC-Oar-089608	Ovis aries	51.19	4.00e-85	308.00
IUUC-Ptr-091521	Pan troglodytes	52.65	6.00e-85	307.00
IUUC-Pan-092092	Papio anubis	51.59	4.00e-84	304.00
IUUC-Pab-098454	Pongo abelii	51.59	2.00e-84	305.00
IUUC-Pca-100981	Procavia capensis	52.65	4.00e-84	304.00
IUUC-Pva-102491	Pteropus vampyrus	53.16	3.00e-91	328.00
IUUC-Rno-105417	Rattus norvegicus	52.55	6.00e-79	286.00
IUUC-Sha-107649	Sarcophilus harrisii	56.27	6.00e-95	340.00
IUUC-Sar-113110	Sorex araneus	44.37	5.00e-49	187.00
IUUC-Ssc-116197	Sus scrofa	53.00	2.00e-85	308.00
IUUC-Tbe-127734	Tupaia belangeri	47.27	2.00e-43	169.00
IUUC-Ttr-128709	Tursiops truncatus	49.29	2.00e-76	278.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence