iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057940

Ensembl Protein ID

AES98591

UniProt Accession

G7KE47; A0A0C3XNK4; G7KE47_MEDTR

Genbank Protein ID

AES98591.2

Protein Name

Damaged DNA-binding protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g070310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g070310	AES98591	AES98591

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-18	65.0	170	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           H+ ++t+l+f ++  ++l+sG   g++ vWD+
   Q: 170  HSRRITSLEFhPTknNILLSGDKKGQLGVWDF 201
           999********444699**************6 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAPVTRRTSF PKVHIERDSD SEQSSSSDEE EPLEEEGPLE EEENGVVENE KIEKLEVGFD 60
ANRKGKTPIT LTLRKVCKVC KKPGHEAGFK GATYIDCPMK PCFLCKTPGH TTLNCPHRVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAAACAAA CAAGTGGTGA AATCGCATTC ATTCATTTCA TTTCATTCAA CTGTTTGTCT 60
CCACACTGTT CAACTTCTCA AACAAAACAA AACCCTTTCT TTCCTTTTGT CTTCGTTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

KEGG

mtr:MTR_5g070310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	70.70	0.00e+00	679.00
IUUC-Aml-002203	Ailuropoda melanoleuca	31.40	3.00e-34	138.00
IUUC-Atr-002957	Amborella trichopoda	74.56	0.00e+00	726.00
IUUC-Apl-003832	Anas platyrhynchos	30.89	3.00e-39	155.00
IUUC-Aca-004358	Anolis carolinensis	32.29	5.00e-41	161.00
IUUC-Aly-006296	Arabidopsis lyrata	76.85	0.00e+00	704.00
IUUC-Ath-007115	Arabidopsis thaliana	75.67	0.00e+00	720.00
IUUC-Ame-010817	Astyanax mexicanus	30.14	2.00e-40	159.00
IUUC-Bta-012914	Bos taurus	31.40	2.00e-37	149.00
IUUC-Bdi-014261	Brachypodium distachyon	72.17	0.00e+00	706.00
IUUC-Bol-015317	Brassica oleracea	75.99	0.00e+00	694.00
IUUC-Bra-016848	Brassica rapa	75.58	0.00e+00	694.00
IUUC-Cja-018967	Callithrix jacchus	30.18	2.00e-35	142.00
IUUC-Cfa-021238	Canis familiaris	31.71	2.00e-32	132.00
IUUC-Cpo-022063	Cavia porcellus	29.39	1.00e-32	133.00
IUUC-Csa-023382	Chlorocebus sabaeus	30.79	2.00e-35	142.00
IUUC-Cho-024931	Choloepus hoffmanni	25.50	9.00e-09	54.70
IUUC-Cne-027093	Cryptococcus neoformans	26.44	4.00e-12	65.90
IUUC-Dre-028732	Danio rerio	28.50	1.00e-36	147.00
IUUC-Dor-030461	Dipodomys ordii	34.07	1.00e-28	120.00
IUUC-Ete-033038	Echinops telfairi	30.49	4.00e-35	141.00
IUUC-Eca-033772	Equus caballus	31.00	2.00e-34	139.00
IUUC-Eeu-035234	Erinaceus europaeus	32.24	2.00e-13	70.10
IUUC-Fca-036095	Felis catus	30.25	1.00e-31	130.00
IUUC-Gmo-039683	Gadus morhua	33.33	7.00e-45	174.00
IUUC-Gga-040530	Gallus gallus	30.89	6.00e-40	157.00
IUUC-Gac-041517	Gasterosteus aculeatus	30.34	9.00e-38	150.00
IUUC-Gma-042883	Glycine max	82.80	0.00e+00	887.00
IUUC-Ggo-045364	Gorilla gorilla	30.79	3.00e-36	145.00
IUUC-Hsa-046354	Homo sapiens	30.79	3.00e-36	145.00
IUUC-Hvu-047151	Hordeum vulgare	72.47	9.00e-131	459.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	31.00	2.00e-35	142.00
IUUC-Lpe-051256	Leersia perrieri	68.50	0.00e+00	662.00
IUUC-Loc-052398	Lepisosteus oculatus	30.31	1.00e-39	157.00
IUUC-Laf-053562	Loxodonta africana	31.71	6.00e-36	144.00
IUUC-Mcc-055197	Macaca mulatta	30.96	6.00e-31	127.00
IUUC-Meu-056151	Macropus eugenii	32.74	9.00e-34	136.00
IUUC-Mga-059923	Meleagris gallopavo	31.50	9.00e-43	167.00
IUUC-Mmr-061465	Microcebus murinus	30.60	6.00e-30	124.00
IUUC-Mdo-063063	Monodelphis domestica	32.23	4.00e-40	158.00
IUUC-Mmu-064294	Mus musculus	29.45	1.00e-35	143.00
IUUC-Mac-065598	Musa acuminata	70.40	0.00e+00	701.00
IUUC-Mpu-066831	Mustela putorius furo	30.49	3.00e-32	131.00
IUUC-Mlu-067222	Myotis lucifugus	31.48	1.00e-33	137.00
IUUC-Nle-069581	Nomascus leucogenys	30.79	3.00e-36	145.00
IUUC-Opr-070644	Ochotona princeps	32.02	3.00e-38	152.00
IUUC-Ont-072605	Oreochromis niloticus	29.62	1.00e-37	150.00
IUUC-Oan-072973	Ornithorhynchus anatinus	32.65	7.00e-40	157.00
IUUC-Ocu-074615	Oryctolagus cuniculus	32.62	2.00e-38	152.00
IUUC-Oba-075283	Oryza barthii	69.76	0.00e+00	647.00
IUUC-Obr-076605	Oryza brachyantha	70.69	0.00e+00	688.00
IUUC-Ogl-077512	Oryza glaberrima	70.82	0.00e+00	662.00
IUUC-Ogu-078329	Oryza glumaepatula	69.98	0.00e+00	648.00
IUUC-Oin-079980	Oryza indica	69.98	0.00e+00	647.00
IUUC-Olo-080516	Oryza longistaminata	71.36	0.00e+00	631.00
IUUC-Ome-081415	Oryza meridionalis	69.33	0.00e+00	662.00
IUUC-Oni-082985	Oryza nivara	69.98	0.00e+00	647.00
IUUC-Opu-084159	Oryza punctata	72.20	0.00e+00	684.00
IUUC-Oru-085137	Oryza rufipogon	71.14	0.00e+00	667.00
IUUC-Osa-085614	Oryza sativa	71.14	0.00e+00	667.00
IUUC-Ola-087044	Oryzias latipes	29.72	4.00e-41	161.00
IUUC-Oga-088274	Otolemur garnettii	30.79	6.00e-35	140.00
IUUC-Oar-089826	Ovis aries	31.40	3.00e-37	149.00
IUUC-Ptr-091631	Pan troglodytes	30.79	3.00e-36	145.00
IUUC-Pan-092535	Papio anubis	30.79	3.00e-36	145.00
IUUC-Psi-093815	Pelodiscus sinensis	30.18	8.00e-38	150.00
IUUC-Pma-094474	Petromyzon marinus	30.30	9.00e-37	146.00
IUUC-Ppa-095414	Physcomitrella patens	60.72	2.00e-173	601.00
IUUC-Pfo-096559	Poecilia formosa	30.08	6.00e-40	157.00
IUUC-Pab-098528	Pongo abelii	30.79	3.00e-36	145.00
IUUC-Pop-100064	Populus trichocarpa	76.31	0.00e+00	790.00
IUUC-Pca-100803	Procavia capensis	31.00	2.00e-33	135.00
IUUC-Ppe-101966	Prunus persica	79.69	0.00e+00	779.00
IUUC-Pva-103213	Pteropus vampyrus	30.93	2.00e-35	142.00
IUUC-Rno-105087	Rattus norvegicus	30.03	1.00e-36	146.00
IUUC-Sha-107466	Sarcophilus harrisii	32.74	8.00e-42	163.00
IUUC-Smo-108958	Selaginella moellendorffii	58.00	3.00e-166	577.00
IUUC-Sit-109968	Setaria italica	70.40	0.00e+00	657.00
IUUC-Sly-111495	Solanum lycopersicum	70.22	0.00e+00	704.00
IUUC-Sar-113272	Sorex araneus	31.53	2.00e-35	142.00
IUUC-Sbi-114706	Sorghum bicolor	66.82	9.00e-178	615.00
IUUC-Ssc-115437	Sus scrofa	31.40	2.00e-33	135.00
IUUC-Tgu-116602	Taeniopygia guttata	31.86	4.00e-38	151.00
IUUC-Tru-118698	Takifugu rubripes	31.60	2.00e-32	132.00
IUUC-Tsy-119027	Tarsius syrichta	31.12	8.00e-29	120.00
IUUC-Tni-119787	Tetraodon nigroviridis	28.42	7.00e-42	164.00
IUUC-Tca-121447	Theobroma cacao	76.82	0.00e+00	790.00
IUUC-Tae-125839	Triticum aestivum	71.30	0.00e+00	694.00
IUUC-Tur-126724	Triticum urartu	71.30	0.00e+00	696.00
IUUC-Tbe-127680	Tupaia belangeri	30.60	3.00e-27	115.00
IUUC-Vvi-131001	Vitis vinifera	74.51	0.00e+00	770.00
IUUC-Xtr-132266	Xenopus tropicalis	32.41	1.00e-42	166.00
IUUC-Xma-133034	Xiphophorus maculatus	28.80	2.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence